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The map label for this gene is sufB [C]

Identifier: 116695453

GI number: 116695453

Start: 1698005

End: 1699453

Strand: Direct

Name: sufB [C]

Synonym: H16_B1512

Alternate gene names: 116695453

Gene position: 1698005-1699453 (Clockwise)

Preceding gene: 116695452

Following gene: 116695454

Centisome position: 58.3

GC content: 63.56

Gene sequence:

>1449_bases
ATGGCAACCCCGGCACGCAAGCTCGATGAACTGATCAGCCACGGCTATAAGCATGGCTTCTACACCGCCGTTGAGACGGA
CACGGTGCCGTGCGGGCTGGATGAGGACGTGATCCGCATGATCTCGGCCATCAAGGGCGAGCCGGAGTTCATGCTGGAGT
GGCGTCTCAAGGCCTTCCGCCACTGGCTCACGATGTCCGAGCCGCACTGGGCGACGGTGACGCACCCGCCCATCGACTAC
CAGGCAATCGCCTACTATGCCGCGCCGCGCTCCCAGAAGGCCGGACCGAAGACGCTGGCCGAGGTCGATCCGGAGTTGCT
GCGCACCTACGAAAAGCTGGGCGTGCCGCTGCACGAGCGCGAGCTGCTGGCCGGCGTGGCCGTGGACGCGGTATTCGACA
GCGTCTCGGTGGCCACCACCTTCAAGCAGAAACTGGGCGAACTCGGCATCATCTTCTGCTCGTTTTCCGAGGCGGTGCGG
GAGCATCCGGCGCTGGTGCAGCAGTATCTCGGCTCGGTCGTGCCCTATACCGACAACTTCTTCGCCTCGCTCAACTCCGC
CGTGTTCAGCGACGGCTCGTTCTGCTATATCCCGCCCGGGGTACGCTGCCCGATGGAGCTGTCGACCTACTTCCGCATCA
ATGCCAGCAACACCGGCCAGTTCGAGCGCACCCTGATCATCGCCGACCAGGGCGCTTACGTCAGCTACCTGGAAGGCTGC
ACCGCGCCGATGCGCGACGAGAACCAGCTGCATGCCGCGGTGGTGGAGCTGATCGCGCTGGAAGACGCACAGATCAAGTA
CGCGACCGTGCAGAACTGGTATCCGGGCGACAAGGACGGCAAGGGCGGCATCTACAACTTCGTCACCAAGCGCGGTGACT
GCCGCGGCGCGCGCTCGAAGATCTCGTGGACCCAGGTGGAGACCGGCTCCGCCATCACCTGGAAGTATCCGAGCGTGATC
CTGCAGGGCGACGACTCGGTCGGCGAGTTCTATTCAGTCGCGCTGACCAACCACTACCAGCAGGCCGACACCGGGACCAA
GATGACGCACCTCGGCAGGAACACCAGGAGCACCATCCTTTCCAAGGGCATCTCGGCCGGCCACGGCCAGAATGCTTATC
GCGGGCTGGTGAAGATGGCCAGGAGCGCGGTCGGCGCACGCAACTACTCGCAGTGCGATTCGCTGCTGCTGGGCGACAAA
TGCGCCGCCCATACCTTCCCTTATATCGAGGTGAAGAACGCCACCGGCCAGGTCGAGCACGAGGCCTCCACCTCGCGCAT
CGGCGAGGACCAGTTGTTCTACTGCCAGAGCCGCGGCGTCAGCGCGGAGGATGCAGTCTCGATGATCGTGAACGGCTTTT
GCAAGGAAGTATTCAAGGAGCTGCCGATGGAATTCGCGGTGGAAGCCCAGAAGCTGCTGGGCGTGAGCCTGGAAGGCAGT
ATCGGATGA

Upstream 100 bases:

>100_bases
TTGCACCCGGTGGATATCGGCGCCTTGCGCGCCCGACGCGCAAACGGGCCGCAAGCTGACATTTTGTGATTCAGGTGACA
GTGGCAAGCGAAGGCAAACC

Downstream 100 bases:

>100_bases
AAGAAGCCAGCCATGCTTGAGATTCGCAAGCTGCACGTCAGCGTAGACGACAAGCCCATCCTGCACGGCATCGACCTCAG
CGTGAAGGCCGGCGAGGTGC

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MATPARKLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFRHWLTMSEPHWATVTHPPIDY
QAIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHERELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVR
EHPALVQQYLGSVVPYTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGC
TAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWKYPSVI
LQGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTILSKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDK
CAAHTFPYIEVKNATGQVEHEASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGS
IG

Sequences:

>Translated_482_residues
MATPARKLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFRHWLTMSEPHWATVTHPPIDY
QAIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHERELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVR
EHPALVQQYLGSVVPYTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGC
TAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWKYPSVI
LQGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTILSKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDK
CAAHTFPYIEVKNATGQVEHEASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGS
IG
>Mature_481_residues
ATPARKLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFRHWLTMSEPHWATVTHPPIDYQ
AIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHERELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVRE
HPALVQQYLGSVVPYTDNFFASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGCT
APMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSKISWTQVETGSAITWKYPSVIL
QGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTILSKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDKC
AAHTFPYIEVKNATGQVEHEASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGSI
G

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=62.2129436325678, Blast_Score=641, Evalue=0.0,
Organism=Escherichia coli, GI1787971, Length=156, Percent_Identity=28.8461538461538, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53123; Mature: 52991

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPARKLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFR
CCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
HWLTMSEPHWATVTHPPIDYQAIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHER
HHHCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHH
ELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVREHPALVQQYLGSVVPYTDNF
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHCHHHHHHHHCCCCCCCCHH
FASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCC
TAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSK
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
ISWTQVETGSAITWKYPSVILQGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTIL
CEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHHCHHHCCCCCHHHHCCCCHHHHHH
SKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDKCAAHTFPYIEVKNATGQVEH
HCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCC
EASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGS
CCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
IG
CC
>Mature Secondary Structure 
ATPARKLDELISHGYKHGFYTAVETDTVPCGLDEDVIRMISAIKGEPEFMLEWRLKAFR
CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
HWLTMSEPHWATVTHPPIDYQAIAYYAAPRSQKAGPKTLAEVDPELLRTYEKLGVPLHER
HHHCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCHHHHCCHHHHHHHHHHCCCCHHH
ELLAGVAVDAVFDSVSVATTFKQKLGELGIIFCSFSEAVREHPALVQQYLGSVVPYTDNF
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHCHHHHHHHHCCCCCCCCHH
FASLNSAVFSDGSFCYIPPGVRCPMELSTYFRINASNTGQFERTLIIADQGAYVSYLEGC
HHHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEEECCCCHHHHHHCC
TAPMRDENQLHAAVVELIALEDAQIKYATVQNWYPGDKDGKGGIYNFVTKRGDCRGARSK
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
ISWTQVETGSAITWKYPSVILQGDDSVGEFYSVALTNHYQQADTGTKMTHLGRNTRSTIL
CEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHHCHHHCCCCCHHHHCCCCHHHHHH
SKGISAGHGQNAYRGLVKMARSAVGARNYSQCDSLLLGDKCAAHTFPYIEVKNATGQVEH
HCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCEEEEECCCCCCCC
EASTSRIGEDQLFYCQSRGVSAEDAVSMIVNGFCKEVFKELPMEFAVEAQKLLGVSLEGS
CCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
IG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]