| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is yfcX [C]
Identifier: 116695290
GI number: 116695290
Start: 1492238
End: 1493203
Strand: Direct
Name: yfcX [C]
Synonym: H16_B1346
Alternate gene names: 116695290
Gene position: 1492238-1493203 (Clockwise)
Preceding gene: 116695289
Following gene: 116695291
Centisome position: 51.24
GC content: 61.18
Gene sequence:
>966_bases ATGTCGACTATCTCCAGGCGTTCATTTGTCCAGTCCGTCGGCGCTGCAACACTCGCGCCGGGAATGTTGCTCGTCTCGGC CGAAACTGGGGCCGCGTCCGAAAGCTCCGCTTCGCCCCAAGGGGCCAGCGCAAACTACGCCGATTACAAACATATCCAGG TCACCAAAGACCACGGCGTCGCCACCGTAACATTGAACTATGCGCCGCTCAACCTGCTCGATGAGGTACTGTCGGATGAG TTCGATCGGGTGACCCGACAACTGGAACAGGATGCGAGCGTACGCGTCATCATCCTGCAGAGCGCTGTGCCGAAATTCTT TATCGCACACTCGGGCCTGCACCGTGTCGGCTCGGCGCCGAAGACGACTTCGAATACACGCACATTCCGTCTGACCCAGA TGCTCGGAGAGCGCCTGCGCAACATGCCAAAAGCCGTGATCGCAAAGGTCGAAGGCATCGCTCGTGGTGGTGGCTGCGAG ATCGCGCTGGCCGCGGACATGTGTTTCGCCGCGATCGGCAAGGCTGTGTTCGGCCAGCCGGAAGTCGTCTGCGGACTCGT CCCCGGCGGGGGCAACACACAGCGCCTGCCGCGGCGCATGGGGCGCGCACGTGCCCTTGAGGTGCTGCTCGTCGGCGGAG ACTTCTCGGCAGAACTGGCCGACCACTACGGTTATATCAATCGAGCGCTGCCGGCAGGAGAACTGGGGCAATTCGTGGAC AAGCTCGCCCGCCGCATTGCAACCTTCCCCACCACCACGATTGCCCATCTGAAAAAGGCCGTGGACATGGGGTCGGACGT ATCGTTCTCCGAAGGGTTGTTGATGGAAGCGCATGAGGCCGACCTTTGCGTAGCCAACGAAGCGATACAGGCGCGGGTCA AGGCGATACTCAAAGCTGGCGCTGAGACCTACGAAGGCGAACTCCATTTTCCTGAACTGTCCGCGAAGCTGCCGCCCGCC GATTAA
Upstream 100 bases:
>100_bases ACCGCGACGCCCCGGTGGAGGGCAACCGCATCACTCGACCCGCCGCGAACTACGGGCCAAGCCTGGCTCGGCAAGCGGTA GATGAATCCAAGGACCTGCC
Downstream 100 bases:
>100_bases GCGATCGACCTGCGTCCGAACCGTGGTTGCCCGCAAGTGCGAAAAAAACATTGATACGAGCGGGAAGGTGAAGTGCACAT AGCAAGGCGCCGGAATGCAT
Product: enoyl-CoA hydratase/carnithine racemase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSTISRRSFVQSVGAATLAPGMLLVSAETGAASESSASPQGASANYADYKHIQVTKDHGVATVTLNYAPLNLLDEVLSDE FDRVTRQLEQDASVRVIILQSAVPKFFIAHSGLHRVGSAPKTTSNTRTFRLTQMLGERLRNMPKAVIAKVEGIARGGGCE IALAADMCFAAIGKAVFGQPEVVCGLVPGGGNTQRLPRRMGRARALEVLLVGGDFSAELADHYGYINRALPAGELGQFVD KLARRIATFPTTTIAHLKKAVDMGSDVSFSEGLLMEAHEADLCVANEAIQARVKAILKAGAETYEGELHFPELSAKLPPA D
Sequences:
>Translated_321_residues MSTISRRSFVQSVGAATLAPGMLLVSAETGAASESSASPQGASANYADYKHIQVTKDHGVATVTLNYAPLNLLDEVLSDE FDRVTRQLEQDASVRVIILQSAVPKFFIAHSGLHRVGSAPKTTSNTRTFRLTQMLGERLRNMPKAVIAKVEGIARGGGCE IALAADMCFAAIGKAVFGQPEVVCGLVPGGGNTQRLPRRMGRARALEVLLVGGDFSAELADHYGYINRALPAGELGQFVD KLARRIATFPTTTIAHLKKAVDMGSDVSFSEGLLMEAHEADLCVANEAIQARVKAILKAGAETYEGELHFPELSAKLPPA D >Mature_320_residues STISRRSFVQSVGAATLAPGMLLVSAETGAASESSASPQGASANYADYKHIQVTKDHGVATVTLNYAPLNLLDEVLSDEF DRVTRQLEQDASVRVIILQSAVPKFFIAHSGLHRVGSAPKTTSNTRTFRLTQMLGERLRNMPKAVIAKVEGIARGGGCEI ALAADMCFAAIGKAVFGQPEVVCGLVPGGGNTQRLPRRMGRARALEVLLVGGDFSAELADHYGYINRALPAGELGQFVDK LARRIATFPTTTIAHLKKAVDMGSDVSFSEGLLMEAHEADLCVANEAIQARVKAILKAGAETYEGELHFPELSAKLPPAD
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=239, Percent_Identity=30.9623430962343, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI20127408, Length=226, Percent_Identity=28.3185840707965, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI68989263, Length=265, Percent_Identity=28.6792452830189, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI31542718, Length=159, Percent_Identity=29.559748427673, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1788682, Length=190, Percent_Identity=31.5789473684211, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787659, Length=256, Percent_Identity=28.515625, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI221142681, Length=225, Percent_Identity=32, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787660, Length=225, Percent_Identity=32, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1790281, Length=98, Percent_Identity=38.7755102040816, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25145438, Length=222, Percent_Identity=31.5315315315315, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17554946, Length=225, Percent_Identity=31.5555555555556, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17540714, Length=227, Percent_Identity=30.3964757709251, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17558304, Length=183, Percent_Identity=32.2404371584699, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17508951, Length=180, Percent_Identity=30, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI25144276, Length=180, Percent_Identity=30, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508953, Length=180, Percent_Identity=30, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI20129971, Length=237, Percent_Identity=31.6455696202532, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI24653477, Length=237, Percent_Identity=31.6455696202532, Blast_Score=107, Evalue=9e-24, Organism=Drosophila melanogaster, GI24653139, Length=245, Percent_Identity=29.7959183673469, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24583077, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24583079, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI19921000, Length=223, Percent_Identity=30.0448430493274, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24654903, Length=241, Percent_Identity=26.1410788381743, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 34116; Mature: 33985
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTISRRSFVQSVGAATLAPGMLLVSAETGAASESSASPQGASANYADYKHIQVTKDHGV CCCCHHHHHHHHHCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE ATVTLNYAPLNLLDEVLSDEFDRVTRQLEQDASVRVIILQSAVPKFFIAHSGLHRVGSAP EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCHHHHCCCC KTTSNTRTFRLTQMLGERLRNMPKAVIAKVEGIARGGGCEIALAADMCFAAIGKAVFGQP CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCC EVVCGLVPGGGNTQRLPRRMGRARALEVLLVGGDFSAELADHYGYINRALPAGELGQFVD CEEEEEECCCCCHHHHHHHHCHHHEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH KLARRIATFPTTTIAHLKKAVDMGSDVSFSEGLLMEAHEADLCVANEAIQARVKAILKAG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHC AETYEGELHFPELSAKLPPAD CHHCCCCEECCCCCCCCCCCC >Mature Secondary Structure STISRRSFVQSVGAATLAPGMLLVSAETGAASESSASPQGASANYADYKHIQVTKDHGV CCCHHHHHHHHHCHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE ATVTLNYAPLNLLDEVLSDEFDRVTRQLEQDASVRVIILQSAVPKFFIAHSGLHRVGSAP EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCHHHHCCCC KTTSNTRTFRLTQMLGERLRNMPKAVIAKVEGIARGGGCEIALAADMCFAAIGKAVFGQP CCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHCCCC EVVCGLVPGGGNTQRLPRRMGRARALEVLLVGGDFSAELADHYGYINRALPAGELGQFVD CEEEEEECCCCCHHHHHHHHCHHHEEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHH KLARRIATFPTTTIAHLKKAVDMGSDVSFSEGLLMEAHEADLCVANEAIQARVKAILKAG HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHC AETYEGELHFPELSAKLPPAD CHHCCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA