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The map label for this gene is 116695209

Identifier: 116695209

GI number: 116695209

Start: 1423114

End: 1425360

Strand: Direct

Name: 116695209

Synonym: H16_B1265

Alternate gene names: NA

Gene position: 1423114-1425360 (Clockwise)

Preceding gene: 116695207

Following gene: 116695210

Centisome position: 48.86

GC content: 69.65

Gene sequence:

>2247_bases
GTGGCCGTGCGCGCGCTGTGCGAATTCACCGCCAAGGCGGGCGACCTGGACCTGCGCTTCGTGCCGACGCCATCGGCGCA
GGAGGGCGTGGCCGGGCATGCGGTAGTAACCAGCCGGCGCGGGGAGGCCTACCAGGCCGAAGTGGCGCTTGCCGCCGATT
TCGGGCCCTTGCGTGTGCGCGGCCGTGCCGACGGCTACGATCCCGTCGCCAACCGGCTCGAAGAAATCAAGACCGTGCGC
GGCGATGCCGCGGTGCCGGACAACCACCGCCACCTGCACTGGGCGCAGGCCAAGGTCTACGGCTGCCTGTTATGCCGCAA
GCTGGGGCTGCCGGGGCTGGAGATCGCGGTGGTCTATTTCGACATCATCAGCCAGCGCGAGCACCCGGTTGCGGAGCACT
TCACTGCGCAGGCGCTTGAAGCCTTCTTCGTGCAGACCTGCGAGCAGTTCCTGCACTGGGCGCAGGCGGAACTGGCCCAC
CGGCAGGCACGCGATGGCGCGCTGGCGCAGCTGGCCTTTCCGCACCAGGGTTTCCGCCCGGGCCAGCGCGAACTGGCGCA
GGCGGTCTATAACGCCAACCGCGCGGGCCGCCACCTGCTGGCGCAGGCGCCCACCGGCATCGGCAAGTCGGTCGGCACAT
TGTTCCCGGTGCTCAAGGCCATGCCGGGGCAGGGCATCGACAAGGTCTACTTCCTGTCGGCCCGCTCCACCGGGCGCGGG
GTGGCGCTGCACGCCGCCAATGCGTTGCGCGGCCACGGCGCGCGGCCGCTGCATGTGCTGGAGCTGGTGGCCCGCGACAA
GGCTTGCGAGCATCCGGAGCTGGCCTGCCATGGCGAGTCCTGCCCGCTGGCGCGCGGCTTCTATGACCGTCTGCCGGCAG
CACGCGAAGCGGCGCGCGGCGTGCCGGTGCGCGACCGCGCCGCGGTGCGCACGCTGGCGCTGGCACACGGAATCTGCCCT
TACTACTTGTCGCAGGAGCTGGTGCGCTGGAGCGACGTGGTGGTGGCCGACTACAACTACTACTTCGACCGCAGCGCGTT
GCTGTATGCGCTGACCGCGGCCAATGGCTGGCGCGCCAGCGTGCTGGTCGACGAGGCCCACAACTTGGTCGAACGCGGCC
GCGCCATGTACACCGGGGAACTCGACCCCCAATCGCTGCGCGAGGTGCGCCGCGGTGCGCCCGCCGTCGTACGCAAGCCA
TTGACACGGCTGGCCCGGCAATGGGGCGCGCTGGCACGCCAGAGCGACGATGCCTATGAAGTCCTGCCCGAAGTGCCCGC
CGTCTTCCGCCGCGCACTGGACGAATGCTGTGCGGCGGCATTGACGCATATGACCGAGCACCCAGGCGCGCAGGATCCGG
CGCTGCAGCGCTTCTATTTCGATGCGCTGCATTTTGGACGCCTGGCCGAGCAGCTCGACGCGCATTCGCTGTTCGATATC
CAGCGCGTGCCGCGCAGCGGCCGCGGCCACCGTGCGCGGCTGTGCCTGCGCAATGTCATCCCGGCCCCGTTCCTGCGCCC
GCGCTTTGGCGCCGCGCATTCGGTCACGCTGTTCTCCGCGACCCTCGATCCCGCCGCCTACTACCTCGATACGCTGGGTT
TGCCGGCCGATTGCGCGCGGGTGCAAGTGCCATCGCCGTTCCGCGCCGAGCAACTGTCGGTGCGGATTGCAGCGCGCATC
TCCACCCGCTATGCGCGGCGCGAACAATCGCTGCCGGCCATCGTCGCGCTGATGGCCGGCCAGTTCCGCGCACGGCGCGG
CAACTACCTGGCGTTCTTCAGCAGCCACGAGTACTTGCAGCAAGCCGTGGCCCGCTTCGCCCAGTCTCACCCCGACATTC
CGCATTGGGTGCAGTCGCGGGGCATGGACGAAGCCGCGCAGGCGGCGTTCCTGGGTACGTTTGCGGAAGGCGGCGAGGGC
ATCGGCTTTGCGGCGCTCGGCGGCGCCTTTGCCGAAGGCGTTGACCTGCCCGGCGAGCGCCTGATCGGCGCCTTCGTTGC
CACCCTGGGGCTGCCCCAGTTCAACTCGGTCAACGAGCAGTTCCGTGCGCGCATGCAGCAGGCGTTCGGGCAGGGCTATG
CCTATGCCTACCTGTATCCCGGGCTGCGCAAGGTGGTGCAGGCGGCAGGCCGGGTCATCCGCACGCAGCAGGACCAGGGC
GTGGTCTACCTGATCGACGACCGCTTTGCCGCGGCCGAGGTGCGCGAACTGCTGCCGGCATGGTGGGAAATCGCCACGGC
GGCCTAG

Upstream 100 bases:

>100_bases
TGTATATTCATACAGTTGCTGCCGCGCCCCGTTTCCTGTGTCCGCCGTCCCGCCACCCATTCCAGCCCCGCCTGCCATGG
CAGCCGCACCGGCCTACGTG

Downstream 100 bases:

>100_bases
AAATTACACAGCCGGGCCAGTCTGGGGCATCCTCTTTGCGCGGTGCCTGCCCGAAGTCGCCGCTGGAACGAATCTGGCAG
GCATGCGGATACCATCAGCC

Product: Rad3-related DNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 747

Protein sequence:

>748_residues
MAVRALCEFTAKAGDLDLRFVPTPSAQEGVAGHAVVTSRRGEAYQAEVALAADFGPLRVRGRADGYDPVANRLEEIKTVR
GDAAVPDNHRHLHWAQAKVYGCLLCRKLGLPGLEIAVVYFDIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELAH
RQARDGALAQLAFPHQGFRPGQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQGIDKVYFLSARSTGRG
VALHAANALRGHGARPLHVLELVARDKACEHPELACHGESCPLARGFYDRLPAAREAARGVPVRDRAAVRTLALAHGICP
YYLSQELVRWSDVVVADYNYYFDRSALLYALTAANGWRASVLVDEAHNLVERGRAMYTGELDPQSLREVRRGAPAVVRKP
LTRLARQWGALARQSDDAYEVLPEVPAVFRRALDECCAAALTHMTEHPGAQDPALQRFYFDALHFGRLAEQLDAHSLFDI
QRVPRSGRGHRARLCLRNVIPAPFLRPRFGAAHSVTLFSATLDPAAYYLDTLGLPADCARVQVPSPFRAEQLSVRIAARI
STRYARREQSLPAIVALMAGQFRARRGNYLAFFSSHEYLQQAVARFAQSHPDIPHWVQSRGMDEAAQAAFLGTFAEGGEG
IGFAALGGAFAEGVDLPGERLIGAFVATLGLPQFNSVNEQFRARMQQAFGQGYAYAYLYPGLRKVVQAAGRVIRTQQDQG
VVYLIDDRFAAAEVRELLPAWWEIATAA

Sequences:

>Translated_748_residues
MAVRALCEFTAKAGDLDLRFVPTPSAQEGVAGHAVVTSRRGEAYQAEVALAADFGPLRVRGRADGYDPVANRLEEIKTVR
GDAAVPDNHRHLHWAQAKVYGCLLCRKLGLPGLEIAVVYFDIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELAH
RQARDGALAQLAFPHQGFRPGQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQGIDKVYFLSARSTGRG
VALHAANALRGHGARPLHVLELVARDKACEHPELACHGESCPLARGFYDRLPAAREAARGVPVRDRAAVRTLALAHGICP
YYLSQELVRWSDVVVADYNYYFDRSALLYALTAANGWRASVLVDEAHNLVERGRAMYTGELDPQSLREVRRGAPAVVRKP
LTRLARQWGALARQSDDAYEVLPEVPAVFRRALDECCAAALTHMTEHPGAQDPALQRFYFDALHFGRLAEQLDAHSLFDI
QRVPRSGRGHRARLCLRNVIPAPFLRPRFGAAHSVTLFSATLDPAAYYLDTLGLPADCARVQVPSPFRAEQLSVRIAARI
STRYARREQSLPAIVALMAGQFRARRGNYLAFFSSHEYLQQAVARFAQSHPDIPHWVQSRGMDEAAQAAFLGTFAEGGEG
IGFAALGGAFAEGVDLPGERLIGAFVATLGLPQFNSVNEQFRARMQQAFGQGYAYAYLYPGLRKVVQAAGRVIRTQQDQG
VVYLIDDRFAAAEVRELLPAWWEIATAA
>Mature_747_residues
AVRALCEFTAKAGDLDLRFVPTPSAQEGVAGHAVVTSRRGEAYQAEVALAADFGPLRVRGRADGYDPVANRLEEIKTVRG
DAAVPDNHRHLHWAQAKVYGCLLCRKLGLPGLEIAVVYFDIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELAHR
QARDGALAQLAFPHQGFRPGQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQGIDKVYFLSARSTGRGV
ALHAANALRGHGARPLHVLELVARDKACEHPELACHGESCPLARGFYDRLPAAREAARGVPVRDRAAVRTLALAHGICPY
YLSQELVRWSDVVVADYNYYFDRSALLYALTAANGWRASVLVDEAHNLVERGRAMYTGELDPQSLREVRRGAPAVVRKPL
TRLARQWGALARQSDDAYEVLPEVPAVFRRALDECCAAALTHMTEHPGAQDPALQRFYFDALHFGRLAEQLDAHSLFDIQ
RVPRSGRGHRARLCLRNVIPAPFLRPRFGAAHSVTLFSATLDPAAYYLDTLGLPADCARVQVPSPFRAEQLSVRIAARIS
TRYARREQSLPAIVALMAGQFRARRGNYLAFFSSHEYLQQAVARFAQSHPDIPHWVQSRGMDEAAQAAFLGTFAEGGEGI
GFAALGGAFAEGVDLPGERLIGAFVATLGLPQFNSVNEQFRARMQQAFGQGYAYAYLYPGLRKVVQAAGRVIRTQQDQGV
VYLIDDRFAAAEVRELLPAWWEIATAA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 82209; Mature: 82078

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRALCEFTAKAGDLDLRFVPTPSAQEGVAGHAVVTSRRGEAYQAEVALAADFGPLRVR
CCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCEEEE
GRADGYDPVANRLEEIKTVRGDAAVPDNHRHLHWAQAKVYGCLLCRKLGLPGLEIAVVYF
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELAHRQARDGALAQLAFPHQGFRP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
GQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQGIDKVYFLSARSTGRG
CHHHHHHHHHCCCHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
VALHAANALRGHGARPLHVLELVARDKACEHPELACHGESCPLARGFYDRLPAAREAARG
EEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHCCHHHHHHCC
VPVRDRAAVRTLALAHGICPYYLSQELVRWSDVVVADYNYYFDRSALLYALTAANGWRAS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEECCCHHCCCHHHEEEEECCCCCEEE
VLVDEAHNLVERGRAMYTGELDPQSLREVRRGAPAVVRKPLTRLARQWGALARQSDDAYE
EEHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VLPEVPAVFRRALDECCAAALTHMTEHPGAQDPALQRFYFDALHFGRLAEQLDAHSLFDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVPRSGRGHRARLCLRNVIPAPFLRPRFGAAHSVTLFSATLDPAAYYLDTLGLPADCAR
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCE
VQVPSPFRAEQLSVRIAARISTRYARREQSLPAIVALMAGQFRARRGNYLAFFSSHEYLQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH
QAVARFAQSHPDIPHWVQSRGMDEAAQAAFLGTFAEGGEGIGFAALGGAFAEGVDLPGER
HHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHH
LIGAFVATLGLPQFNSVNEQFRARMQQAFGQGYAYAYLYPGLRKVVQAAGRVIRTQQDQG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCC
VVYLIDDRFAAAEVRELLPAWWEIATAA
EEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVRALCEFTAKAGDLDLRFVPTPSAQEGVAGHAVVTSRRGEAYQAEVALAADFGPLRVR
CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCEEEE
GRADGYDPVANRLEEIKTVRGDAAVPDNHRHLHWAQAKVYGCLLCRKLGLPGLEIAVVYF
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH
DIISQREHPVAEHFTAQALEAFFVQTCEQFLHWAQAELAHRQARDGALAQLAFPHQGFRP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
GQRELAQAVYNANRAGRHLLAQAPTGIGKSVGTLFPVLKAMPGQGIDKVYFLSARSTGRG
CHHHHHHHHHCCCHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
VALHAANALRGHGARPLHVLELVARDKACEHPELACHGESCPLARGFYDRLPAAREAARG
EEEEEHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHCCHHHHHHCC
VPVRDRAAVRTLALAHGICPYYLSQELVRWSDVVVADYNYYFDRSALLYALTAANGWRAS
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEECCCHHCCCHHHEEEEECCCCCEEE
VLVDEAHNLVERGRAMYTGELDPQSLREVRRGAPAVVRKPLTRLARQWGALARQSDDAYE
EEHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH
VLPEVPAVFRRALDECCAAALTHMTEHPGAQDPALQRFYFDALHFGRLAEQLDAHSLFDI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVPRSGRGHRARLCLRNVIPAPFLRPRFGAAHSVTLFSATLDPAAYYLDTLGLPADCAR
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCE
VQVPSPFRAEQLSVRIAARISTRYARREQSLPAIVALMAGQFRARRGNYLAFFSSHEYLQ
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHHH
QAVARFAQSHPDIPHWVQSRGMDEAAQAAFLGTFAEGGEGIGFAALGGAFAEGVDLPGER
HHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHH
LIGAFVATLGLPQFNSVNEQFRARMQQAFGQGYAYAYLYPGLRKVVQAAGRVIRTQQDQG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCCC
VVYLIDDRFAAAEVRELLPAWWEIATAA
EEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]