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The map label for this gene is vdlD [H]

Identifier: 116695180

GI number: 116695180

Start: 1396322

End: 1396864

Strand: Direct

Name: vdlD [H]

Synonym: H16_B1236

Alternate gene names: 116695180

Gene position: 1396322-1396864 (Clockwise)

Preceding gene: 116695179

Following gene: 116695181

Centisome position: 47.94

GC content: 64.64

Gene sequence:

>543_bases
ATGCCGCCGTCGCAGGTTCGCCCCAGAAATCCCGCCCCCGCAATCCGTACCCGCATCATGAACGATCTGTCCCACCAGCT
TTCCATGACCGTGCTGATGACGCCGGACATGGCCAACTTCTCCGGCAACGTCCACGGCGGCACCATCCTCAAGTACCTGG
ACATGGTTGCCTATGCGTGCGCCAGCCGCTACGCCGGCCGCTACGTGGTAACGCTGTCGGTCGACCAGGTGGTGTTTCGC
CAGCCGATCCACGTGGGCGAGCTGGTGACCTTCCTGGCCTCGGTCAACTTCACCGGCCGCAGCTCGATGGAAATCGGCAT
CAAGGTGGTGACGGAAAATATCCGCAGCAAGCTGGTGCGCCATACCAACAGCTGCTACTTCACCATGGTGGCCGTGGACG
ACAACGGCACGCCGGCCGAGGTGCCGCCGCTGGAGCCGCGCGACGAGGTGGAGCGCCAGCGCTTTGCCGCCGCCCAGCAG
CGCCGCGCGCTGCGCCAGGAAATGGAAAAGCGCCACGACGACATCAAGTCGTCGGTGACCTGA

Upstream 100 bases:

>100_bases
CTGGCACGGCCACGCCTGCCGGTACCGGGCTGCAGCCGGCAACGGCGGGCACGATCCGGGTTAAACTGCCGGCGCCAGCG
TTCCGGCGTGCAGTCAGGCA

Downstream 100 bases:

>100_bases
ATACCCCCGCCATGAAGCGCTACTGCAATCGCATCCGCACGGTCCTGGCCGTCGTCTGTCTGACGGCCGCCTCGGGCGCC
CACGCCGAGGAGATCGGCAG

Product: Acyl-CoA hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MPPSQVRPRNPAPAIRTRIMNDLSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFR
QPIHVGELVTFLASVNFTGRSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGTPAEVPPLEPRDEVERQRFAAAQQ
RRALRQEMEKRHDDIKSSVT

Sequences:

>Translated_180_residues
MPPSQVRPRNPAPAIRTRIMNDLSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFR
QPIHVGELVTFLASVNFTGRSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGTPAEVPPLEPRDEVERQRFAAAQQ
RRALRQEMEKRHDDIKSSVT
>Mature_179_residues
PPSQVRPRNPAPAIRTRIMNDLSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYACASRYAGRYVVTLSVDQVVFRQ
PIHVGELVTFLASVNFTGRSSMEIGIKVVTENIRSKLVRHTNSCYFTMVAVDDNGTPAEVPPLEPRDEVERQRFAAAQQR
RALRQEMEKRHDDIKSSVT

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI22165355, Length=140, Percent_Identity=33.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI22165400, Length=140, Percent_Identity=33.5714285714286, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI32528286, Length=164, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI32528284, Length=164, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI75709208, Length=164, Percent_Identity=32.9268292682927, Blast_Score=74, Evalue=6e-14,
Organism=Homo sapiens, GI32528282, Length=155, Percent_Identity=32.9032258064516, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI18640736, Length=135, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 20220; Mature: 20088

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSQVRPRNPAPAIRTRIMNDLSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYAC
CCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
ASRYAGRYVVTLSVDQVVFRQPIHVGELVTFLASVNFTGRSSMEIGIKVVTENIRSKLVR
HHHCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HTNSCYFTMVAVDDNGTPAEVPPLEPRDEVERQRFAAAQQRRALRQEMEKRHDDIKSSVT
CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PPSQVRPRNPAPAIRTRIMNDLSHQLSMTVLMTPDMANFSGNVHGGTILKYLDMVAYAC
CCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
ASRYAGRYVVTLSVDQVVFRQPIHVGELVTFLASVNFTGRSSMEIGIKVVTENIRSKLVR
HHHCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
HTNSCYFTMVAVDDNGTPAEVPPLEPRDEVERQRFAAAQQRRALRQEMEKRHDDIKSSVT
CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]