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The map label for this gene is ttuB [H]

Identifier: 116695116

GI number: 116695116

Start: 1323775

End: 1325079

Strand: Direct

Name: ttuB [H]

Synonym: H16_B1171

Alternate gene names: 116695116

Gene position: 1323775-1325079 (Clockwise)

Preceding gene: 116695115

Following gene: 116695117

Centisome position: 45.45

GC content: 61.38

Gene sequence:

>1305_bases
GTGGATACAACCCTGCAGGCGGGAACAAAGATCAGGACGTTCGAGGATGCGACCTATCGCAAGGTGAGCTGGAGGCTGGT
GCCATTCCTGATGGTCTGCTTCCTGATCGCTTATCTCGATCGCGTCAACGTAGGTTTTGCCAAGCTCCAGATGTCGCAGC
AACTGGGCTTCAGCGAAACCGTCTACGGGCTGGGCGCCGGGATTTTCTTTATCGGCTACTTCCTGTTCGAGGTGCCTAGC
AACCTGGCATTGCACAAGTTCGGCGCCAAGGTGTGGATCGGCCGGATCATGATCACGTGGGGGATACTCTCTGCGTGCTT
TGCGTTCGTGCAGACGCCAACCCAGTTCTACACGCTGCGCTTCCTGCTGGGCCTGGCCGAAGCCGGCTTCACGCCAGGCA
TCGTGTACTACCTGTCGTGCTGGTACCCGTCGCACCGGCGTGCCAAGATCATGGCCATCTACTGCATGGGCTCGCCGCTG
TCCGGCATCATCGGCAACCCGCTGTCCGGCTTCCTGATGGGCAGCATGGCCGGCGTGTCTGGCCTGGGCGGCTGGCAATG
GATGTTCGTCATCGAGGCGGTGCCGGCGGTGCTGCTGGGGTGCTTCTGCTTCTACTACCTGGACAACTCCATTGCCAAGG
CCAATTGGCTGACCAGCGCGGAGAAGCAGGTCCTTGAACTGGCCAAGTCGGAAGACGTCAAGGCGGTGGACCCGCAGGCA
CGCGTCGGCAAGGTGTTTACCGATCCGCGCGTCTGGCTGATCAGCCTGATCTGCTTCTGCTATGTCACTGGCCAGTACGG
CATCACGCTCTGGCTGCCCACGTTCATCAGGTCGACCGGTGTCAGCGACCCGCTCCATATCGGCATGCTGAGCGCGATAC
CGTATATGGCGGCCATTGTCTCGATGTACTTCTTCGGCCGCAGCGCCGACAAGCACCGCGAGCGGCGCTGGCATTTGATC
ATCCCGTGCATGATGGGCGCGATCGGTTTCCTGGCGTTGCCCTGGGTCATGCACAACACCGCGCTGTCCCTGGTGTTCCT
GTCGATCGCCGCAGCCGGCATCCTGACCTGCACGCCGCTGTTCTGGTCCCTGCCGACGGCTTTCCTCAGCGGCGCGGCGT
TGGCCACGGCCATCGCCATGAGCAACTCGATCGGCAACCTTGCCGGCTTTACCAGCGGCTACATGATCGGCTACCTGCGC
GACGTGACCCAGAGCGGCAACAGTGCTTACTACATGATTGCCGGGATGCTGATGCTGGGTGCGTTCTGCATCTGGACAAT
ACCTGCCCGCCTGGTCAACCGATAG

Upstream 100 bases:

>100_bases
AGACGGGGGCGGGCGCCGCGCGTGCGCAACGCCCCCGCCGGACTGGTCGCAACGGATCAGCGCAGCACTGCCGTACCTGA
CAAAAAACAGAGGAGACGCT

Downstream 100 bases:

>100_bases
CGAGACAAGGCGGGGTGCGGCACCGTGCCGCTGCCCCGCCTGCCCATCATCTCGCAAACACTTCGCGCCCTTGCCGGCGC
ATGGAAGGCTCTCATGACAA

Product: MFS transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MDTTLQAGTKIRTFEDATYRKVSWRLVPFLMVCFLIAYLDRVNVGFAKLQMSQQLGFSETVYGLGAGIFFIGYFLFEVPS
NLALHKFGAKVWIGRIMITWGILSACFAFVQTPTQFYTLRFLLGLAEAGFTPGIVYYLSCWYPSHRRAKIMAIYCMGSPL
SGIIGNPLSGFLMGSMAGVSGLGGWQWMFVIEAVPAVLLGCFCFYYLDNSIAKANWLTSAEKQVLELAKSEDVKAVDPQA
RVGKVFTDPRVWLISLICFCYVTGQYGITLWLPTFIRSTGVSDPLHIGMLSAIPYMAAIVSMYFFGRSADKHRERRWHLI
IPCMMGAIGFLALPWVMHNTALSLVFLSIAAAGILTCTPLFWSLPTAFLSGAALATAIAMSNSIGNLAGFTSGYMIGYLR
DVTQSGNSAYYMIAGMLMLGAFCIWTIPARLVNR

Sequences:

>Translated_434_residues
MDTTLQAGTKIRTFEDATYRKVSWRLVPFLMVCFLIAYLDRVNVGFAKLQMSQQLGFSETVYGLGAGIFFIGYFLFEVPS
NLALHKFGAKVWIGRIMITWGILSACFAFVQTPTQFYTLRFLLGLAEAGFTPGIVYYLSCWYPSHRRAKIMAIYCMGSPL
SGIIGNPLSGFLMGSMAGVSGLGGWQWMFVIEAVPAVLLGCFCFYYLDNSIAKANWLTSAEKQVLELAKSEDVKAVDPQA
RVGKVFTDPRVWLISLICFCYVTGQYGITLWLPTFIRSTGVSDPLHIGMLSAIPYMAAIVSMYFFGRSADKHRERRWHLI
IPCMMGAIGFLALPWVMHNTALSLVFLSIAAAGILTCTPLFWSLPTAFLSGAALATAIAMSNSIGNLAGFTSGYMIGYLR
DVTQSGNSAYYMIAGMLMLGAFCIWTIPARLVNR
>Mature_434_residues
MDTTLQAGTKIRTFEDATYRKVSWRLVPFLMVCFLIAYLDRVNVGFAKLQMSQQLGFSETVYGLGAGIFFIGYFLFEVPS
NLALHKFGAKVWIGRIMITWGILSACFAFVQTPTQFYTLRFLLGLAEAGFTPGIVYYLSCWYPSHRRAKIMAIYCMGSPL
SGIIGNPLSGFLMGSMAGVSGLGGWQWMFVIEAVPAVLLGCFCFYYLDNSIAKANWLTSAEKQVLELAKSEDVKAVDPQA
RVGKVFTDPRVWLISLICFCYVTGQYGITLWLPTFIRSTGVSDPLHIGMLSAIPYMAAIVSMYFFGRSADKHRERRWHLI
IPCMMGAIGFLALPWVMHNTALSLVFLSIAAAGILTCTPLFWSLPTAFLSGAALATAIAMSNSIGNLAGFTSGYMIGYLR
DVTQSGNSAYYMIAGMLMLGAFCIWTIPARLVNR

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI6912666, Length=363, Percent_Identity=23.4159779614325, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87082071, Length=422, Percent_Identity=36.4928909952607, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI2367379, Length=313, Percent_Identity=22.6837060702875, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789152, Length=442, Percent_Identity=21.9457013574661, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789515, Length=437, Percent_Identity=20.5949656750572, Blast_Score=66, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322025, Length=197, Percent_Identity=26.9035532994924, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321698, Length=326, Percent_Identity=23.3128834355828, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319250, Length=312, Percent_Identity=24.0384615384615, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321502, Length=374, Percent_Identity=22.7272727272727, Blast_Score=76, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319876, Length=255, Percent_Identity=25.8823529411765, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6323032, Length=373, Percent_Identity=24.3967828418231, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324410, Length=156, Percent_Identity=26.2820512820513, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47931; Mature: 47931

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]