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The map label for this gene is ycfQ [C]

Identifier: 116695044

GI number: 116695044

Start: 1243671

End: 1244219

Strand: Direct

Name: ycfQ [C]

Synonym: H16_B1099

Alternate gene names: 116695044

Gene position: 1243671-1244219 (Clockwise)

Preceding gene: 116695043

Following gene: 116695045

Centisome position: 42.7

GC content: 69.22

Gene sequence:

>549_bases
ATGGCCACGCCTTCCGCCCGCGACCGCATCCTCGACACCGCTGCCCGCCTGTTCTACCAGGGGGGCTACCGCGCCACCGG
CATCGACAAGATCATTGCCGAATCCGGCGTCGCCAAGATGTCGCTCTACCGCCATTTCGCCTCCAAGAACGAGTTGATTT
CGGCGTTCCTGGACCGCCGCCATGACGAGTGGATGACGTGGTTCCGGCAGGACGTGGAAGCCCGGCTGGCCGCGCGCCCG
CACCTGGACGTGATTGCCGACGCGCTGGCGGACTGGTTCGGCCGAGACTTCCGTGGCTGCGCCTTTATCAACGTGGTGGC
CGAGGCGGGCGGCGACGCGCGCGCGGCCGAACAGGCCGCGGCGCACAAGGCCGAGTTGGCCGCATTCGTCGCCGACATCG
CCACGCGCCTGGGCCTGGACCAGCCGCAAGCGGTGGCCGAGGAAGCGATGCTGTGCATCGAAGGCATGATCGTGCGCTAC
CAGATGCAGCCGGATGCGGCGGTGATCGAGGCGGGGCGGCGGTTGCTGGGCCGGCTGCAGGCCGGCTGA

Upstream 100 bases:

>100_bases
TTTGCTAGACAGGTCTGTCTGTCATAGTATCGACCTATAGAGAGGCAGGGCGGCGCAGGGCGCTGTCCGGCCGCGCACCT
TTACCGACTACGCCGCCACC

Downstream 100 bases:

>100_bases
TTGGCTTGGGGGGCTGGCCACTGAGGCCGGGGACTGCCCAACACTTCCTTCGTCTGGCTTAGCGCCGAGGCAGCATCCGG
TGCGAATAGAAAATGTCTCG

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator Tetr Family; Regulatory Protein; Regulatory Protein Tetr; TetR-Family Protein Transcriptional Regulator; Transcriptional Regulator TetR; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MATPSARDRILDTAARLFYQGGYRATGIDKIIAESGVAKMSLYRHFASKNELISAFLDRRHDEWMTWFRQDVEARLAARP
HLDVIADALADWFGRDFRGCAFINVVAEAGGDARAAEQAAAHKAELAAFVADIATRLGLDQPQAVAEEAMLCIEGMIVRY
QMQPDAAVIEAGRRLLGRLQAG

Sequences:

>Translated_182_residues
MATPSARDRILDTAARLFYQGGYRATGIDKIIAESGVAKMSLYRHFASKNELISAFLDRRHDEWMTWFRQDVEARLAARP
HLDVIADALADWFGRDFRGCAFINVVAEAGGDARAAEQAAAHKAELAAFVADIATRLGLDQPQAVAEEAMLCIEGMIVRY
QMQPDAAVIEAGRRLLGRLQAG
>Mature_181_residues
ATPSARDRILDTAARLFYQGGYRATGIDKIIAESGVAKMSLYRHFASKNELISAFLDRRHDEWMTWFRQDVEARLAARPH
LDVIADALADWFGRDFRGCAFINVVAEAGGDARAAEQAAAHKAELAAFVADIATRLGLDQPQAVAEEAMLCIEGMIVRYQ
MQPDAAVIEAGRRLLGRLQAG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20022; Mature: 19891

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPSARDRILDTAARLFYQGGYRATGIDKIIAESGVAKMSLYRHFASKNELISAFLDRR
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
HDEWMTWFRQDVEARLAARPHLDVIADALADWFGRDFRGCAFINVVAEAGGDARAAEQAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
AHKAELAAFVADIATRLGLDQPQAVAEEAMLCIEGMIVRYQMQPDAAVIEAGRRLLGRLQ
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHC
AG
CC
>Mature Secondary Structure 
ATPSARDRILDTAARLFYQGGYRATGIDKIIAESGVAKMSLYRHFASKNELISAFLDRR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
HDEWMTWFRQDVEARLAARPHLDVIADALADWFGRDFRGCAFINVVAEAGGDARAAEQAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
AHKAELAAFVADIATRLGLDQPQAVAEEAMLCIEGMIVRYQMQPDAAVIEAGRRLLGRLQ
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA