Click here to switch to the map view.

The map label for this gene is cyt [H]

Identifier: 116694993

GI number: 116694993

Start: 1184571

End: 1184894

Strand: Direct

Name: cyt [H]

Synonym: H16_B1048

Alternate gene names: 116694993

Gene position: 1184571-1184894 (Clockwise)

Preceding gene: 116694992

Following gene: 116694998

Centisome position: 40.67

GC content: 67.59

Gene sequence:

>324_bases
ATGAAGAAGGAATGGATGGCGCTGGCGGTGGCTTCGGCGCTGCTGCCGGGCGCGGCGCTGGCCGGCACGGCCGCCGACAT
GCAGGCCCTGGCCGACAAGAGCGGCTGCTTTTCCTGCCATGGCATGCAGTCAAAGCTGGTGGGCCCGGGGTTTGCCGAGG
TGGCTGCCAAGTACAAGGGCGACAGCCAGGCGGCGGAGCGGCTGGCAAAGAAGATCCGCGAAGGCGGCAAGGGCGCGTGG
GGGCGGATTCCGATGCCGCCGCATGGCAGCCTTGCTGAGGACGATGCGAAGAAACTGGCGGAGTGGGTGTTGAGTGCCAG
CTGA

Upstream 100 bases:

>100_bases
CTGAGCTGGCGGGAGATGACACTGCCAGGCGCCCGCATCGCATCATGGGTGCGATGCGGGCGCCGGGCGCGGGTGCAACA
GGATGAAACGGGACTCAGGT

Downstream 100 bases:

>100_bases
GGCCGGCGACTGTCTTGACGATGCCGGCATGCCGGCAAGGAACCCCGGCTGGCGCCTGCCATGCCGGGGTTTTTCCTTTC
TTAGCGCTGGCCGCTGCTCA

Product: cytochrome c551/c552

Products: NA

Alternate protein names: Cytochrome c-551; Cytochrome c552 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKKEWMALAVASALLPGAALAGTAADMQALADKSGCFSCHGMQSKLVGPGFAEVAAKYKGDSQAAERLAKKIREGGKGAW
GRIPMPPHGSLAEDDAKKLAEWVLSAS

Sequences:

>Translated_107_residues
MKKEWMALAVASALLPGAALAGTAADMQALADKSGCFSCHGMQSKLVGPGFAEVAAKYKGDSQAAERLAKKIREGGKGAW
GRIPMPPHGSLAEDDAKKLAEWVLSAS
>Mature_107_residues
MKKEWMALAVASALLPGAALAGTAADMQALADKSGCFSCHGMQSKLVGPGFAEVAAKYKGDSQAAERLAKKIREGGKGAW
GRIPMPPHGSLAEDDAKKLAEWVLSAS

Specific function: Monoheme c-type cytochrome. Probable electron donor to membrane cytochrome oxidase and to periplasmic nitrite reductase [H]

COG id: COG4654

COG function: function code C; Cytochrome c551/c552

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002324 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11070; Mature: 11070

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEWMALAVASALLPGAALAGTAADMQALADKSGCFSCHGMQSKLVGPGFAEVAAKYKG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
DSQAAERLAKKIREGGKGAWGRIPMPPHGSLAEDDAKKLAEWVLSAS
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKEWMALAVASALLPGAALAGTAADMQALADKSGCFSCHGMQSKLVGPGFAEVAAKYKG
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
DSQAAERLAKKIREGGKGAWGRIPMPPHGSLAEDDAKKLAEWVLSAS
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746537; 12700255 [H]