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The map label for this gene is yncE [C]

Identifier: 116694987

GI number: 116694987

Start: 1177719

End: 1178747

Strand: Direct

Name: yncE [C]

Synonym: H16_B1042

Alternate gene names: 116694987

Gene position: 1177719-1178747 (Clockwise)

Preceding gene: 116694986

Following gene: 116694988

Centisome position: 40.44

GC content: 69.58

Gene sequence:

>1029_bases
ATGAACAAGATGCCATCTCCCCGCTGGTTTGCCGGCGCCTTGCTGCTGGTCACGACGCTGCTGGTTGCCGCCGGCCTGGC
CGAAGGCGCGCAGGGCGGGGCCGCGCGACCCGCCGGCCAGGCTGGCAACCAGGTCTTTGTCTCGAGCGAGAAGGACGATG
CCCTCGCCGTCTTCGATGCCCGCAGCCGGCAGCTGGTCGCGGTATGGCGGCAGTGCAAGCGCCCGCGCCACCTGCAACTG
TCGCCCGACCGGACGCGCCTGTACGTGGCCTGCAGCGACGACAACCGGGTGGATGTGGTCGACGTGGCCAGCCGCAAGAC
CGTGGCATCGCTGCCGGTGGGGGATGATCCGGAGTTGTTCGATCTCAGCCAGGACGGCCGCACGCTCTATGTCTCGAATG
AAGAGGACGGGCTGCTGTCGGCCTACGACACGGCGTCGGGCAAGCGCGTGTTCGCGGTCAGGGTGGGCGAGGAGCCGGAG
GGCGTCAAGGTCAGCGCCGACGGCAGGCATGTGTACGTGACCTCGGAGGTGGCCAACCTGGTCCATGTCATCGACGTGGC
CTCGCGCAAGGTGATCCGCAATATCCAGGTCGGCAACCGGCCGCGGCGGCTGCTGCTGGTGCGCGACGGCAAGGAGCTGT
GGGTATCCAACGAGCTCTCGGCCAGCGTCAGCGTGATCCGTACCGATACCTTCGAGGTGGCCCAGACCATCGCCTTCGCG
CCGCGGGGCTTTCGCGCCGAGGACGTGACCCCGGTGGGCATGGCGGCCAGCGGCGACGGCACGCGCGCCTATATCGGGCT
CGGCCGCGCCAACCATGTCGCGGTGGTCGAGGTGGCGTCGCGCCGGGTGCAGGACTATGTGCTGGTCGGCCGCCGCGCAT
GGGGGCTGGCGCTGAGCCGCGACAACGCGCGGCTGTATGTCGCCAACGGCCTGTCCGACGATGTCAGCGTGGTGGCCACC
GCCAGCCGCAAGGCGGTGGCCACGCTCAAGGCGGGCCGGGTGCCGCATTCGGTGGCGATCGATGACTGA

Upstream 100 bases:

>100_bases
CACTGCGCGGCGCCGCTGCGTGCGACACCCTGGAGGGCGCTTTCCTGGCCATGACGCCGCGGGCCCCTGTCACTGACCCG
GCCGCGAGGCGCGTACCCGC

Downstream 100 bases:

>100_bases
GCGCTCGCGTGCGTGGTGGCAGTGGTGGCGTGCCGGGCTGGGCGCCGTGGCGCTGGGGTGGCTGCCTGCCGCGGTGCACG
CTGCCGAGGTGCGCGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Cell Surface Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Vegetative Incompatibility; Beta-Propeller Fold Protein; Surface Antigen; Triple Helix Repeat-Containing Collagen; Yvtn Beta-Propeller Repeat Family Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; IPT/TIG Domain Protein; Transmembrane Protein; Signal Peptide; Beta-Propeller Repeat Protein YVTN Family; LOW QUALITY PROTEIN Surface Antigen Protein; Surface Antigen-Like Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; WD-40 Repeat-Containing Protein; Cytochrome D1 Heme Region; Serine/Threonine Protein Kinase; Signal Peptide Protein; YVTN Family Beta-Propeller Repeat-Containing Protein; Alpha-1 2-Mannosidase; SGL Domain-Containing Protein; Secreted Protein; Lipoprotein; YVTN Family Beta-Propeller Repeat Family Protein

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNKMPSPRWFAGALLLVTTLLVAAGLAEGAQGGAARPAGQAGNQVFVSSEKDDALAVFDARSRQLVAVWRQCKRPRHLQL
SPDRTRLYVACSDDNRVDVVDVASRKTVASLPVGDDPELFDLSQDGRTLYVSNEEDGLLSAYDTASGKRVFAVRVGEEPE
GVKVSADGRHVYVTSEVANLVHVIDVASRKVIRNIQVGNRPRRLLLVRDGKELWVSNELSASVSVIRTDTFEVAQTIAFA
PRGFRAEDVTPVGMAASGDGTRAYIGLGRANHVAVVEVASRRVQDYVLVGRRAWGLALSRDNARLYVANGLSDDVSVVAT
ASRKAVATLKAGRVPHSVAIDD

Sequences:

>Translated_342_residues
MNKMPSPRWFAGALLLVTTLLVAAGLAEGAQGGAARPAGQAGNQVFVSSEKDDALAVFDARSRQLVAVWRQCKRPRHLQL
SPDRTRLYVACSDDNRVDVVDVASRKTVASLPVGDDPELFDLSQDGRTLYVSNEEDGLLSAYDTASGKRVFAVRVGEEPE
GVKVSADGRHVYVTSEVANLVHVIDVASRKVIRNIQVGNRPRRLLLVRDGKELWVSNELSASVSVIRTDTFEVAQTIAFA
PRGFRAEDVTPVGMAASGDGTRAYIGLGRANHVAVVEVASRRVQDYVLVGRRAWGLALSRDNARLYVANGLSDDVSVVAT
ASRKAVATLKAGRVPHSVAIDD
>Mature_342_residues
MNKMPSPRWFAGALLLVTTLLVAAGLAEGAQGGAARPAGQAGNQVFVSSEKDDALAVFDARSRQLVAVWRQCKRPRHLQL
SPDRTRLYVACSDDNRVDVVDVASRKTVASLPVGDDPELFDLSQDGRTLYVSNEEDGLLSAYDTASGKRVFAVRVGEEPE
GVKVSADGRHVYVTSEVANLVHVIDVASRKVIRNIQVGNRPRRLLLVRDGKELWVSNELSASVSVIRTDTFEVAQTIAFA
PRGFRAEDVTPVGMAASGDGTRAYIGLGRANHVAVVEVASRRVQDYVLVGRRAWGLALSRDNARLYVANGLSDDVSVVAT
ASRKAVATLKAGRVPHSVAIDD

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36797; Mature: 36797

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKMPSPRWFAGALLLVTTLLVAAGLAEGAQGGAARPAGQAGNQVFVSSEKDDALAVFDA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
RSRQLVAVWRQCKRPRHLQLSPDRTRLYVACSDDNRVDVVDVASRKTVASLPVGDDPELF
CCCHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCEE
DLSQDGRTLYVSNEEDGLLSAYDTASGKRVFAVRVGEEPEGVKVSADGRHVYVTSEVANL
EECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEEEHHHHHH
VHVIDVASRKVIRNIQVGNRPRRLLLVRDGKELWVSNELSASVSVIRTDTFEVAQTIAFA
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHCC
PRGFRAEDVTPVGMAASGDGTRAYIGLGRANHVAVVEVASRRVQDYVLVGRRAWGLALSR
CCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHEEEECCCEEEEEEEC
DNARLYVANGLSDDVSVVATASRKAVATLKAGRVPHSVAIDD
CCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEECCC
>Mature Secondary Structure
MNKMPSPRWFAGALLLVTTLLVAAGLAEGAQGGAARPAGQAGNQVFVSSEKDDALAVFDA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
RSRQLVAVWRQCKRPRHLQLSPDRTRLYVACSDDNRVDVVDVASRKTVASLPVGDDPELF
CCCHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCEE
DLSQDGRTLYVSNEEDGLLSAYDTASGKRVFAVRVGEEPEGVKVSADGRHVYVTSEVANL
EECCCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCEEEECCCCEEEEEHHHHHH
VHVIDVASRKVIRNIQVGNRPRRLLLVRDGKELWVSNELSASVSVIRTDTFEVAQTIAFA
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECHHHHHHHHHCC
PRGFRAEDVTPVGMAASGDGTRAYIGLGRANHVAVVEVASRRVQDYVLVGRRAWGLALSR
CCCCCCCCCCCCCEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHEEEECCCEEEEEEEC
DNARLYVANGLSDDVSVVATASRKAVATLKAGRVPHSVAIDD
CCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA