| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116694951
Identifier: 116694951
GI number: 116694951
Start: 1131587
End: 1132597
Strand: Direct
Name: 116694951
Synonym: H16_B1006
Alternate gene names: NA
Gene position: 1131587-1132597 (Clockwise)
Preceding gene: 116694950
Following gene: 116694952
Centisome position: 38.85
GC content: 68.25
Gene sequence:
>1011_bases ATGAATCAAGCACAACCGTCGGCGCGCCGCAGGGCGTCGCTGTCATGCATGCTCGGCCTGGCGCTGTCGGTGGCGCTGCC GGCTGCGCTCCCATCGACCGCCCAGGCTCAGGCGTGGCCGACCAAGGTGGTCAGGATCGTGGTCGGCGGCCCCGCCGGCG GCACCGCCGATATCCTCGGGCGCCTGCTGGCCGAGGGGCTGACGCAGTCGCTGGGCAAGCCGGTGATCGTCGAGCAGAAG CCGGGCGGCGCCGGCGCGATCGCGGTCAACACACTGCTTTCCGCACCGCATGACGGACATACGCTGCTGCTGATCCAGGG CGGCATCGTTTCCGAAACGCCGCTGGCGCTGAAGGTCTCGTTCGATCCTTTCAAGGACCTGAAACCTGTTGCCCAGGTGG CCCGTACGGGGCTGGTGCTGGTGGGCAACCCCAAGCTGCCGGCGAAGAACTTCAGCGAACTGCTTGCCTACATCAAGAGC AAGCCCGGGCAGATCGACTATGCCTCTTATGCCGCCGGCATGCGCGGCCAGACCATCGGCGTCCAGTTCAACCGCCTGGC CGGCGTGGATATGAAGCATGTCGGCTACAAGGGATCGCCGCCCGCGCTGCAGGACGTGATGGGCGGCCATGTGCCGCTGA TGTTCGACGGCCTGGCCACGTCGCTGCCGCTGATCAAGTCCGGCAAGCTCAAGGCCTATGCCGTGGCGTATCCCAAGCGC ATCCCCGCGCTGCCGGATGTGCCGACCTTCGCCGAAGTCGGCTTCCCGGCGATGACGGAGCCCGGCTGGATGGGGGTGTG GCTGCCGCCGGACGTGCCGGCGGCGGTGCAGGAAAAGATCCGCAACGCCACGCTGGCCATCGTGCAGCAGCCCGGCTACC GCGAGCGCGTGGAGGCCATGGGCATGGACGCCGGGCAGCCGCTCAGCAGCGAGGCCCTGTCCAGGGATGCGCGCGCCGCC CATGAGCGGCAGGCGGAGTTGCTGCGGTCGATACATTTCGTGCCGGAGTAG
Upstream 100 bases:
>100_bases CACTGGCGATGCGCCAGCAGAAGGGCAGGGGTGGCAGATCACCGGCTCACGATGAAGCCGGCTGCTGCCCTGAACAACCC TCGAACATTCGGAGACAACC
Downstream 100 bases:
>100_bases GGGGCGGCCCGCCTTGCGCGGGCCTCGGCGAATCGTTCAGCAAAGTTGTATGCTTTCTGCATGGCGCGCCGGGCGCCTTC AGCGCGTCCCGGCCACGGCG
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNQAQPSARRRASLSCMLGLALSVALPAALPSTAQAQAWPTKVVRIVVGGPAGGTADILGRLLAEGLTQSLGKPVIVEQK PGGAGAIAVNTLLSAPHDGHTLLLIQGGIVSETPLALKVSFDPFKDLKPVAQVARTGLVLVGNPKLPAKNFSELLAYIKS KPGQIDYASYAAGMRGQTIGVQFNRLAGVDMKHVGYKGSPPALQDVMGGHVPLMFDGLATSLPLIKSGKLKAYAVAYPKR IPALPDVPTFAEVGFPAMTEPGWMGVWLPPDVPAAVQEKIRNATLAIVQQPGYRERVEAMGMDAGQPLSSEALSRDARAA HERQAELLRSIHFVPE
Sequences:
>Translated_336_residues MNQAQPSARRRASLSCMLGLALSVALPAALPSTAQAQAWPTKVVRIVVGGPAGGTADILGRLLAEGLTQSLGKPVIVEQK PGGAGAIAVNTLLSAPHDGHTLLLIQGGIVSETPLALKVSFDPFKDLKPVAQVARTGLVLVGNPKLPAKNFSELLAYIKS KPGQIDYASYAAGMRGQTIGVQFNRLAGVDMKHVGYKGSPPALQDVMGGHVPLMFDGLATSLPLIKSGKLKAYAVAYPKR IPALPDVPTFAEVGFPAMTEPGWMGVWLPPDVPAAVQEKIRNATLAIVQQPGYRERVEAMGMDAGQPLSSEALSRDARAA HERQAELLRSIHFVPE >Mature_336_residues MNQAQPSARRRASLSCMLGLALSVALPAALPSTAQAQAWPTKVVRIVVGGPAGGTADILGRLLAEGLTQSLGKPVIVEQK PGGAGAIAVNTLLSAPHDGHTLLLIQGGIVSETPLALKVSFDPFKDLKPVAQVARTGLVLVGNPKLPAKNFSELLAYIKS KPGQIDYASYAAGMRGQTIGVQFNRLAGVDMKHVGYKGSPPALQDVMGGHVPLMFDGLATSLPLIKSGKLKAYAVAYPKR IPALPDVPTFAEVGFPAMTEPGWMGVWLPPDVPAAVQEKIRNATLAIVQQPGYRERVEAMGMDAGQPLSSEALSRDARAA HERQAELLRSIHFVPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35359; Mature: 35359
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAQPSARRRASLSCMLGLALSVALPAALPSTAQAQAWPTKVVRIVVGGPAGGTADILG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEECCCCCHHHHHH RLLAEGLTQSLGKPVIVEQKPGGAGAIAVNTLLSAPHDGHTLLLIQGGIVSETPLALKVS HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEE FDPFKDLKPVAQVARTGLVLVGNPKLPAKNFSELLAYIKSKPGQIDYASYAAGMRGQTIG CCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEC VQFNRLAGVDMKHVGYKGSPPALQDVMGGHVPLMFDGLATSLPLIKSGKLKAYAVAYPKR EEEHHHCCCCHHHCCCCCCCHHHHHHHCCCCCEEECCHHHCCCCEECCCEEEEEEECCHH IPALPDVPTFAEVGFPAMTEPGWMGVWLPPDVPAAVQEKIRNATLAIVQQPGYRERVEAM CCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHH GMDAGQPLSSEALSRDARAAHERQAELLRSIHFVPE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQAQPSARRRASLSCMLGLALSVALPAALPSTAQAQAWPTKVVRIVVGGPAGGTADILG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEEEEEEEECCCCCHHHHHH RLLAEGLTQSLGKPVIVEQKPGGAGAIAVNTLLSAPHDGHTLLLIQGGIVSETPLALKVS HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEE FDPFKDLKPVAQVARTGLVLVGNPKLPAKNFSELLAYIKSKPGQIDYASYAAGMRGQTIG CCCCHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEC VQFNRLAGVDMKHVGYKGSPPALQDVMGGHVPLMFDGLATSLPLIKSGKLKAYAVAYPKR EEEHHHCCCCHHHCCCCCCCHHHHHHHCCCCCEEECCHHHCCCCEECCCEEEEEEECCHH IPALPDVPTFAEVGFPAMTEPGWMGVWLPPDVPAAVQEKIRNATLAIVQQPGYRERVEAM CCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHH GMDAGQPLSSEALSRDARAAHERQAELLRSIHFVPE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271; 9524276 [H]