| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is pcpA [H]
Identifier: 116694913
GI number: 116694913
Start: 1090994
End: 1091875
Strand: Direct
Name: pcpA [H]
Synonym: H16_B0968
Alternate gene names: 116694913
Gene position: 1090994-1091875 (Clockwise)
Preceding gene: 116694910
Following gene: 116694914
Centisome position: 37.46
GC content: 62.7
Gene sequence:
>882_bases ATGCGAAACCTCAATGAAGACACGATCACGCAGGCGGTGCTTGCGTCGATGGCGAACTGCCGCGATGCGCGCCTGCGCAC CGTGATGACCAGTCTCGTCCAGCATTTGCATGCCTTCGCGCGTGATGTGAAGCTGAGCGAGGAAGAATGGTTCGCGGCCA TTCGTTTTCTGACTGCGGTGGGCCATATCACCGATGACAAGCGCCAGGAATTCATCCTGCTGTCCGATGTGCTTGGCCTG TCGATGCTGGTGACGGCACAAAACAACGTGAAGCCGGCAGGCTGCACCGAGTCCACTGTATTTGGCCCGTTTTACGTGGA AGACAGTCCCGCGTACGACAGCGGCGCGGATATCTCGAATGGCGCGCAAGGCGAGCCCTGCTTTGTGCGCGGGCAGGTGC GGGACTGGGAGGGGACGGCCATTCCGGATGCCACCATCGAAGTCTGGCAGGCGGACCAGCACGGCCACTATGACGTGCAG ATTCCGGGCCCTGACGGCGCGCATACCCACCGTGCGCGCGGGCGTTTGCGAACCGGCGAAGACGGCAGGTTTTCGTTTCG CTCGATCCTGGCCGAACCCTATCCGATTCCGCATGACGGCCCGGTCGGCGCGCTGCTGGAGGCGCTTGGCCGCCATCCCT GGCGGCCTGCCCACCTGCACTTCATGATCAGTGCACCGGGTTGCGAGACGCTGATTACCCATGTCTTTCGCGACGGTGAC CGCTACCTCGACTCCGACGCCGTGTTCGGCGTGCGCTCGACGCTGGTGGCTGACTGGGTGCAGCACCCGCCGGGCATTGC GCCTGATGGCAGCTTGCTCGAGGACCCTTACTACACCCTCGATTTTGATTTTGTCCTGAGCCGCGCGCACGAACGGAAAT GA
Upstream 100 bases:
>100_bases AGAGGAGAACACTACTTCGCTGCCACCTCTTTTTACCTGTGGAGGAAGGAATTAATGTTAGCAGCAAGCGAGAAGCAGAA AACATGCGGAGACACCCGGA
Downstream 100 bases:
>100_bases TCAGGCACATCGTCATGTGGAAGGTGAAGGGTGAGACGGCGCATGAACGGGCTGATGCCCAGCAACGCATCAAGGCGGCC TTCGAGGCCTTGCCCGGCCG
Product: 6-chlorohydroxyquinol-1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-HQD [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRNLNEDTITQAVLASMANCRDARLRTVMTSLVQHLHAFARDVKLSEEEWFAAIRFLTAVGHITDDKRQEFILLSDVLGL SMLVTAQNNVKPAGCTESTVFGPFYVEDSPAYDSGADISNGAQGEPCFVRGQVRDWEGTAIPDATIEVWQADQHGHYDVQ IPGPDGAHTHRARGRLRTGEDGRFSFRSILAEPYPIPHDGPVGALLEALGRHPWRPAHLHFMISAPGCETLITHVFRDGD RYLDSDAVFGVRSTLVADWVQHPPGIAPDGSLLEDPYYTLDFDFVLSRAHERK
Sequences:
>Translated_293_residues MRNLNEDTITQAVLASMANCRDARLRTVMTSLVQHLHAFARDVKLSEEEWFAAIRFLTAVGHITDDKRQEFILLSDVLGL SMLVTAQNNVKPAGCTESTVFGPFYVEDSPAYDSGADISNGAQGEPCFVRGQVRDWEGTAIPDATIEVWQADQHGHYDVQ IPGPDGAHTHRARGRLRTGEDGRFSFRSILAEPYPIPHDGPVGALLEALGRHPWRPAHLHFMISAPGCETLITHVFRDGD RYLDSDAVFGVRSTLVADWVQHPPGIAPDGSLLEDPYYTLDFDFVLSRAHERK >Mature_293_residues MRNLNEDTITQAVLASMANCRDARLRTVMTSLVQHLHAFARDVKLSEEEWFAAIRFLTAVGHITDDKRQEFILLSDVLGL SMLVTAQNNVKPAGCTESTVFGPFYVEDSPAYDSGADISNGAQGEPCFVRGQVRDWEGTAIPDATIEVWQADQHGHYDVQ IPGPDGAHTHRARGRLRTGEDGRFSFRSILAEPYPIPHDGPVGALLEALGRHPWRPAHLHFMISAPGCETLITHVFRDGD RYLDSDAVFGVRSTLVADWVQHPPGIAPDGSLLEDPYYTLDFDFVLSRAHERK
Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.37 [H]
Molecular weight: Translated: 32543; Mature: 32543
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLNEDTITQAVLASMANCRDARLRTVMTSLVQHLHAFARDVKLSEEEWFAAIRFLTAV CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GHITDDKRQEFILLSDVLGLSMLVTAQNNVKPAGCTESTVFGPFYVEDSPAYDSGADISN HCCCCCCHHHEEHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC GAQGEPCFVRGQVRDWEGTAIPDATIEVWQADQHGHYDVQIPGPDGAHTHRARGRLRTGE CCCCCCEEEECCEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCCC DGRFSFRSILAEPYPIPHDGPVGALLEALGRHPWRPAHLHFMISAPGCETLITHVFRDGD CCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCC RYLDSDAVFGVRSTLVADWVQHPPGIAPDGSLLEDPYYTLDFDFVLSRAHERK HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCC >Mature Secondary Structure MRNLNEDTITQAVLASMANCRDARLRTVMTSLVQHLHAFARDVKLSEEEWFAAIRFLTAV CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GHITDDKRQEFILLSDVLGLSMLVTAQNNVKPAGCTESTVFGPFYVEDSPAYDSGADISN HCCCCCCHHHEEHHHHHHHHEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC GAQGEPCFVRGQVRDWEGTAIPDATIEVWQADQHGHYDVQIPGPDGAHTHRARGRLRTGE CCCCCCEEEECCEECCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCCC DGRFSFRSILAEPYPIPHDGPVGALLEALGRHPWRPAHLHFMISAPGCETLITHVFRDGD CCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCC RYLDSDAVFGVRSTLVADWVQHPPGIAPDGSLLEDPYYTLDFDFVLSRAHERK HHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141483 [H]