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The map label for this gene is acrR [C]

Identifier: 116694846

GI number: 116694846

Start: 1021628

End: 1022212

Strand: Direct

Name: acrR [C]

Synonym: H16_B0900

Alternate gene names: 116694846

Gene position: 1021628-1022212 (Clockwise)

Preceding gene: 116694836

Following gene: 116694847

Centisome position: 35.08

GC content: 58.8

Gene sequence:

>585_bases
ATGAATAAAGCTCAGCGAACCCGCCAGTTCATCGTCGAGAAGACAGCCCCGATCTTCAACGTCAAAGGCTATGCCGGTAC
GTCCCTGGCCGATATGACGGAGGCCACCGGGCTGACGAAGGGCAGCGTCTACGGCAACTTTGCCAACAAGGAGGAAGTGG
CCCTGGCTGCTTTCGATCACAACTGGAAGCAGGCGCAGGCGGCAGTCCGGGCCGTAATGGCCACGAGAGAAACCAGCAAG
GAGCAGCTGCTCGCATTGACAGGCGTGTATGAAAGCCTGCCTGAGGAATTCCCCGTGGGGGGATGCCCGCTGCTCAACAC
AGCGATTGAAGCCGACGACACGCACCCGGCCCTGCGCGAGAAAGCCATGGAGGCTTTCCGGGGCTGGAAGACGCATCTTG
TCAAAGTCATCAAGGCAGGGATTGCTTCGCAGGAGTTCCGCAAAGACGTCGATGCCGAGCAGACTGCCGTCACGCTGATT
GCATTGATCGAGGGCGCCATCATGATCTCTCGCCTCACAGGCAACGCTGGCTACAGCAAGGCCGTGATGTCGGCGGTAGA
AAAAACCATCGTCGATCTGAAGTGA

Upstream 100 bases:

>100_bases
GAACGCATTCATCAGGCTGATGGCGGGGGCAGGGGGGATCACTCCGAGCGGATTCATCGATGCACTTGACAAAAATACCA
ATTGGTATATTCTGGCTTCC

Downstream 100 bases:

>100_bases
TTTTTTCGACCAAAAATATACCAATTGGTATTCTATCTGCCAAAGGAAGCAACCATGAGCGTGCAGCTGAAACGGAAAGT
CGCATTCGCCCTGTCGATGG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNKAQRTRQFIVEKTAPIFNVKGYAGTSLADMTEATGLTKGSVYGNFANKEEVALAAFDHNWKQAQAAVRAVMATRETSK
EQLLALTGVYESLPEEFPVGGCPLLNTAIEADDTHPALREKAMEAFRGWKTHLVKVIKAGIASQEFRKDVDAEQTAVTLI
ALIEGAIMISRLTGNAGYSKAVMSAVEKTIVDLK

Sequences:

>Translated_194_residues
MNKAQRTRQFIVEKTAPIFNVKGYAGTSLADMTEATGLTKGSVYGNFANKEEVALAAFDHNWKQAQAAVRAVMATRETSK
EQLLALTGVYESLPEEFPVGGCPLLNTAIEADDTHPALREKAMEAFRGWKTHLVKVIKAGIASQEFRKDVDAEQTAVTLI
ALIEGAIMISRLTGNAGYSKAVMSAVEKTIVDLK
>Mature_194_residues
MNKAQRTRQFIVEKTAPIFNVKGYAGTSLADMTEATGLTKGSVYGNFANKEEVALAAFDHNWKQAQAAVRAVMATRETSK
EQLLALTGVYESLPEEFPVGGCPLLNTAIEADDTHPALREKAMEAFRGWKTHLVKVIKAGIASQEFRKDVDAEQTAVTLI
ALIEGAIMISRLTGNAGYSKAVMSAVEKTIVDLK

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21033; Mature: 21033

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAQRTRQFIVEKTAPIFNVKGYAGTSLADMTEATGLTKGSVYGNFANKEEVALAAFDH
CCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
NWKQAQAAVRAVMATRETSKEQLLALTGVYESLPEEFPVGGCPLLNTAIEADDTHPALRE
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
KAMEAFRGWKTHLVKVIKAGIASQEFRKDVDAEQTAVTLIALIEGAIMISRLTGNAGYSK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVMSAVEKTIVDLK
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNKAQRTRQFIVEKTAPIFNVKGYAGTSLADMTEATGLTKGSVYGNFANKEEVALAAFDH
CCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC
NWKQAQAAVRAVMATRETSKEQLLALTGVYESLPEEFPVGGCPLLNTAIEADDTHPALRE
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
KAMEAFRGWKTHLVKVIKAGIASQEFRKDVDAEQTAVTLIALIEGAIMISRLTGNAGYSK
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AVMSAVEKTIVDLK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10475962; 12004073 [H]