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The map label for this gene is 116694826

Identifier: 116694826

GI number: 116694826

Start: 997781

End: 998482

Strand: Direct

Name: 116694826

Synonym: H16_B0880

Alternate gene names: NA

Gene position: 997781-998482 (Clockwise)

Preceding gene: 116694825

Following gene: 116694827

Centisome position: 34.26

GC content: 67.95

Gene sequence:

>702_bases
ATGCGCTTCAATGGAAGCAATGTCACGACCGGCCCCCGCACCATGAAGACCCTGCTTGCCGATACCCCCTGGAGCCGACG
GCTTGCCGCCGGCATTGACCGTATAGCCATCCTGTGCGGATGGTGGCTGATCGTGCTGTCGGTGGCGACCTGCGTCGAAA
TGCTCGGGCGCAAGCTGGGTGGCTTCAGCTTGCAGGGTATCGATGAAATCGGCGGCTATACCTACGCCATCCTTGGCGCG
TGCGGCTTTGCCTACACCCTGGTCGGGCGCGGCCATACCCGGGTGGACTTCCTGCTGACGCGCTTTCCGGTCAAGGTGCG
GGCCGTGCTCAACCTGCTGGCGATGCTGAGCCTGGCTGCGGTGGCCGGACTCTGTCTCTGGCGCGCCGGCCATGTGCTGG
TGGACACCATCGACCTGCACAGCACCGCGTCCACGCCGCTTGCCACGCCCCTGTGGATGCCCCAGACCCTGTGGCTGGCC
GGCTATGCCCTGTTCGCACTGGTGGCGGCCTGCGCTGCCTGGCACGCCCTGCAGCTGCTGGTGCGGCGCGACTGGGCCCG
CCTGAACAGCCAGTTCGGGCCGCAGACCCTGGCCGAGGAGATCGAGGCGGAGGCGGACATCCGCGTCGCCGCCGCGCCCG
CTGAGGGCAATGGCGCAGGCCAGGGCAGCGCTGAAGGCAAGAGCGAAGGAGCGGCAGCATGA

Upstream 100 bases:

>100_bases
GTCCTTGCCTTTCCACGCGGGCGCGCCGGAAAGCTGTTGATTCTTAAGGGTTTATTCAAGAAGTTCCGGCGTGCGGGAAA
GCCGCCGCGCGGGTCTGGCC

Downstream 100 bases:

>100_bases
TCGGTCCCATTGAAATCCTGCTCGGGCTGTGCCTGATGCTGGGGCTGATGTTCCTTGGCTTCCATGTGGCCACCAGCATG
CTGGTGGTGGGCGTGGCCGG

Product: TRAP-type transport system, small permease component

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRFNGSNVTTGPRTMKTLLADTPWSRRLAAGIDRIAILCGWWLIVLSVATCVEMLGRKLGGFSLQGIDEIGGYTYAILGA
CGFAYTLVGRGHTRVDFLLTRFPVKVRAVLNLLAMLSLAAVAGLCLWRAGHVLVDTIDLHSTASTPLATPLWMPQTLWLA
GYALFALVAACAAWHALQLLVRRDWARLNSQFGPQTLAEEIEAEADIRVAAAPAEGNGAGQGSAEGKSEGAAA

Sequences:

>Translated_233_residues
MRFNGSNVTTGPRTMKTLLADTPWSRRLAAGIDRIAILCGWWLIVLSVATCVEMLGRKLGGFSLQGIDEIGGYTYAILGA
CGFAYTLVGRGHTRVDFLLTRFPVKVRAVLNLLAMLSLAAVAGLCLWRAGHVLVDTIDLHSTASTPLATPLWMPQTLWLA
GYALFALVAACAAWHALQLLVRRDWARLNSQFGPQTLAEEIEAEADIRVAAAPAEGNGAGQGSAEGKSEGAAA
>Mature_233_residues
MRFNGSNVTTGPRTMKTLLADTPWSRRLAAGIDRIAILCGWWLIVLSVATCVEMLGRKLGGFSLQGIDEIGGYTYAILGA
CGFAYTLVGRGHTRVDFLLTRFPVKVRAVLNLLAMLSLAAVAGLCLWRAGHVLVDTIDLHSTASTPLATPLWMPQTLWLA
GYALFALVAACAAWHALQLLVRRDWARLNSQFGPQTLAEEIEAEADIRVAAAPAEGNGAGQGSAEGKSEGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24806; Mature: 24806

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNGSNVTTGPRTMKTLLADTPWSRRLAAGIDRIAILCGWWLIVLSVATCVEMLGRKLG
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFSLQGIDEIGGYTYAILGACGFAYTLVGRGHTRVDFLLTRFPVKVRAVLNLLAMLSLAA
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VAGLCLWRAGHVLVDTIDLHSTASTPLATPLWMPQTLWLAGYALFALVAACAAWHALQLL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRDWARLNSQFGPQTLAEEIEAEADIRVAAAPAEGNGAGQGSAEGKSEGAAA
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFNGSNVTTGPRTMKTLLADTPWSRRLAAGIDRIAILCGWWLIVLSVATCVEMLGRKLG
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFSLQGIDEIGGYTYAILGACGFAYTLVGRGHTRVDFLLTRFPVKVRAVLNLLAMLSLAA
CCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VAGLCLWRAGHVLVDTIDLHSTASTPLATPLWMPQTLWLAGYALFALVAACAAWHALQLL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRRDWARLNSQFGPQTLAEEIEAEADIRVAAAPAEGNGAGQGSAEGKSEGAAA
HHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA