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The map label for this gene is yhjB [H]

Identifier: 116694813

GI number: 116694813

Start: 982740

End: 984122

Strand: Direct

Name: yhjB [H]

Synonym: H16_B0867

Alternate gene names: 116694813

Gene position: 982740-984122 (Clockwise)

Preceding gene: 116694812

Following gene: 116694814

Centisome position: 33.74

GC content: 64.79

Gene sequence:

>1383_bases
ATGACCACAGCGGTATTCGTCGGCTTCATTGTCTTCTCGCTCTACCTCGCCATCCGCTCGAAGAAAGGCCACGGCGCGCA
GAGCGTGCATGACTTCTTCGTGGCGTCGCGGCAGTTCGGCGCCTACCTGGTGTTCTTCCTCGCGGCGGGCGAGATCTACA
GCATCGGCACGATGGTGGGCTTTCCCGGTGGCATCTACGCCAAGGGACCGACCTACGGGGTCTGGTTCCTCGGCTACATC
CTGCTGGCGTATCCGCTCGGCTATTTCCTCGGGCCCAAGATCTGGCAGGCGGGCGCGCGCTATAACGCGATCACGCTGCC
AGACCTGTTCAAGGGCCACTATGGCAGCCGTGCGCTGGAGCTGATCGTGGCGGGCTCGGCGATCCTGTTCCTGCTGCCCT
GGGGCCAGCTGCAGTTCACCGGGCTGGTGGCGGCGCTCAAGGGGCTGGGCTGGGAGTTCGAGCCGGTGTACCTGGTGATG
ATCTCGGCGGCACTGGCCTTTACCTACATTGCCATCTCCGGCGTGCGCGCATCGGCCTATATCGCCATCCTCAAGGACAT
CCTGATGGTGGTGGCGATCGTCGTCACCGGCGTTGCGGTGGGCTGGAAGGCGGGCGTGGGCGAAGTGTTCCATGCCGCCA
GCATGCAGGTCAGCAACCAGATGAATGACACCCAGCTGCGCTTCTCGATGAGCACCATGCTGTTCCAGGCGCTGGGCTTC
TACGTGATGCCGTTCGCGGTGCAGAACTTCTTCACGGCCAAGAGCGCCAACACCATCCGGCGCACGCAGGTGGCGATGCC
GCTGTACATGCTGATGTATCCGTTCCTGGTGCTGGCGTCGTACTACGCGATCAGCCAGAACCTGCAGCTCGCCTCCCCCA
ACGAGGCCTTCTTCGCGGCCGCGGTGCGGCTGTTGCCGGACTGGCTGCTCGGACTGGTGACCGCCGGCGCGGCGCTGTCG
GGACTGCTGGTGCTGGCCGGCATCTGCCTGGCGATCGGCCCCATCGTCACGCGCAACCTGCTGCCGGGCATGCCCGAGGC
GCGCCAGAAGCAGGGCGCCAAGGTGGTGATTGTGATCTACCTGGTGCTGTCGATCGCCATGACACTGGCCACGCCGAACC
TGATGCTGACGCTGATCAATACCACCTACTACGGCGTGACGCAGTTCTTCCCTGGCGTGCTGGTGATCCTGTTCTCGCTG
AAGGTGCGTCCGCTGGCGATTGCGCTCGGCATCGTCACCGGCCAGGCACTGGCGATCGCGCTGTATGTGCAGCAGGTCGA
CTTCGGCGGCATCAACCTCGGGCTGGTCAGCCTGGGCGTCAACCTGCTGGTGACCGCGCTGGTGAACTACACGCCCCGAC
TGGCCCGCGTGCAGGCGGCGTGA

Upstream 100 bases:

>100_bases
TGCCTGGTTCGTGCTGACCTCCGGCTGCATGCTGGCGTGCTGGCTGCTGTTCGACCGCCACGCCGCCGACGCGGCGCATG
AAGCCTGAAGGGAGACCACC

Downstream 100 bases:

>100_bases
ATGACCGGAATCATGCAATCCATGACACAAGACGACACGGCGCGCACGCAGGTATTCGTGGCGCGCAAGATCCTCACGAT
GGAAGCCGGCCAGCCCGAGG

Product: SSS family APC transporter

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 459

Protein sequence:

>460_residues
MTTAVFVGFIVFSLYLAIRSKKGHGAQSVHDFFVASRQFGAYLVFFLAAGEIYSIGTMVGFPGGIYAKGPTYGVWFLGYI
LLAYPLGYFLGPKIWQAGARYNAITLPDLFKGHYGSRALELIVAGSAILFLLPWGQLQFTGLVAALKGLGWEFEPVYLVM
ISAALAFTYIAISGVRASAYIAILKDILMVVAIVVTGVAVGWKAGVGEVFHAASMQVSNQMNDTQLRFSMSTMLFQALGF
YVMPFAVQNFFTAKSANTIRRTQVAMPLYMLMYPFLVLASYYAISQNLQLASPNEAFFAAAVRLLPDWLLGLVTAGAALS
GLLVLAGICLAIGPIVTRNLLPGMPEARQKQGAKVVIVIYLVLSIAMTLATPNLMLTLINTTYYGVTQFFPGVLVILFSL
KVRPLAIALGIVTGQALAIALYVQQVDFGGINLGLVSLGVNLLVTALVNYTPRLARVQAA

Sequences:

>Translated_460_residues
MTTAVFVGFIVFSLYLAIRSKKGHGAQSVHDFFVASRQFGAYLVFFLAAGEIYSIGTMVGFPGGIYAKGPTYGVWFLGYI
LLAYPLGYFLGPKIWQAGARYNAITLPDLFKGHYGSRALELIVAGSAILFLLPWGQLQFTGLVAALKGLGWEFEPVYLVM
ISAALAFTYIAISGVRASAYIAILKDILMVVAIVVTGVAVGWKAGVGEVFHAASMQVSNQMNDTQLRFSMSTMLFQALGF
YVMPFAVQNFFTAKSANTIRRTQVAMPLYMLMYPFLVLASYYAISQNLQLASPNEAFFAAAVRLLPDWLLGLVTAGAALS
GLLVLAGICLAIGPIVTRNLLPGMPEARQKQGAKVVIVIYLVLSIAMTLATPNLMLTLINTTYYGVTQFFPGVLVILFSL
KVRPLAIALGIVTGQALAIALYVQQVDFGGINLGLVSLGVNLLVTALVNYTPRLARVQAA
>Mature_459_residues
TTAVFVGFIVFSLYLAIRSKKGHGAQSVHDFFVASRQFGAYLVFFLAAGEIYSIGTMVGFPGGIYAKGPTYGVWFLGYIL
LAYPLGYFLGPKIWQAGARYNAITLPDLFKGHYGSRALELIVAGSAILFLLPWGQLQFTGLVAALKGLGWEFEPVYLVMI
SAALAFTYIAISGVRASAYIAILKDILMVVAIVVTGVAVGWKAGVGEVFHAASMQVSNQMNDTQLRFSMSTMLFQALGFY
VMPFAVQNFFTAKSANTIRRTQVAMPLYMLMYPFLVLASYYAISQNLQLASPNEAFFAAAVRLLPDWLLGLVTAGAALSG
LLVLAGICLAIGPIVTRNLLPGMPEARQKQGAKVVIVIYLVLSIAMTLATPNLMLTLINTTYYGVTQFFPGVLVILFSLK
VRPLAIALGIVTGQALAIALYVQQVDFGGINLGLVSLGVNLLVTALVNYTPRLARVQAA

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 49547; Mature: 49416

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAVFVGFIVFSLYLAIRSKKGHGAQSVHDFFVASRQFGAYLVFFLAAGEIYSIGTMVG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
FPGGIYAKGPTYGVWFLGYILLAYPLGYFLGPKIWQAGARYNAITLPDLFKGHYGSRALE
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECHHHHCCCCCCHHHH
LIVAGSAILFLLPWGQLQFTGLVAALKGLGWEFEPVYLVMISAALAFTYIAISGVRASAY
HHEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
IAILKDILMVVAIVVTGVAVGWKAGVGEVFHAASMQVSNQMNDTQLRFSMSTMLFQALGF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YVMPFAVQNFFTAKSANTIRRTQVAMPLYMLMYPFLVLASYYAISQNLQLASPNEAFFAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHH
AVRLLPDWLLGLVTAGAALSGLLVLAGICLAIGPIVTRNLLPGMPEARQKQGAKVVIVIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEHHHH
LVLSIAMTLATPNLMLTLINTTYYGVTQFFPGVLVILFSLKVRPLAIALGIVTGQALAIA
HHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYVQQVDFGGINLGLVSLGVNLLVTALVNYTPRLARVQAA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure 
TTAVFVGFIVFSLYLAIRSKKGHGAQSVHDFFVASRQFGAYLVFFLAAGEIYSIGTMVG
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
FPGGIYAKGPTYGVWFLGYILLAYPLGYFLGPKIWQAGARYNAITLPDLFKGHYGSRALE
CCCCEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECHHHHCCCCCCHHHH
LIVAGSAILFLLPWGQLQFTGLVAALKGLGWEFEPVYLVMISAALAFTYIAISGVRASAY
HHEECCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
IAILKDILMVVAIVVTGVAVGWKAGVGEVFHAASMQVSNQMNDTQLRFSMSTMLFQALGF
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
YVMPFAVQNFFTAKSANTIRRTQVAMPLYMLMYPFLVLASYYAISQNLQLASPNEAFFAA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHH
AVRLLPDWLLGLVTAGAALSGLLVLAGICLAIGPIVTRNLLPGMPEARQKQGAKVVIVIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEHHHH
LVLSIAMTLATPNLMLTLINTTYYGVTQFFPGVLVILFSLKVRPLAIALGIVTGQALAIA
HHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LYVQQVDFGGINLGLVSLGVNLLVTALVNYTPRLARVQAA
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]