| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is phnB [H]
Identifier: 116694778
GI number: 116694778
Start: 941453
End: 942757
Strand: Direct
Name: phnB [H]
Synonym: H16_B0832
Alternate gene names: 116694778
Gene position: 941453-942757 (Clockwise)
Preceding gene: 116694777
Following gene: 116694779
Centisome position: 32.32
GC content: 65.98
Gene sequence:
>1305_bases ATGGAAACTGCCGATCGCATCCAGGCAGGGGCGTTCGTCGCTCCGGCCGAGCATTCGTTCCGGCGCGCCCAGTGGCGCAT GCTGCTGGCCGCGATGTTCTGCTACTTCTTCTTCTACACGGGGCGGCAGACCTTTGGCTTCGCCATTCCCGGCATCCAGC AGGAATTCGGGTTTTCCAAGGAAGCGCTGGGCTGGGCCTCCACCTGCCTGCTGTGGTGCTACGCCATCGGGCAGGCCATC AACGGCAACCTGGGTGACAAGTTCGGCGGCCGCCGCGTGATGACCGCCGGCGCGATCCTGTCGTGCGCGGCCAACTGGGT GGTCAGCTTCGCCGTCGGCTTCAAGAGCCTGGCGATTCCCTGGGGCATCAACGGCTACTTCCAGGCCCTTGGCTGGGCGC CCGGCAGCCGGCTGCTGTCGAACTGGTGGGGCGCCGAAGAGCGCGGCAAAGTCTACGGCTTCTACGTGTTCGCGGCCGGC TGCGCCTCGGTGCTGTCGTTCGTCACCTCGATCGTGGTCGTGAATATCCTGCACCTGGACTGGCGCTGGATCTTCCGCCT GCCGGTGCTGCTGATGCTGGTGGGCGGCATCACCTTCTTCCTGATCGTGCGCGAGCGGCCGGAAGACCTTGGCTTCAAGT CGCCCGATACCGGCGTTGCCAAGGCCGAGGGTGCGGAGAAGGCTACCGCAGTCGAGACCGATGCCGGCGAAAGCTCCTGG TCGCGCTACAAGGCCGTGCTGCGCAACCCGCGGCTTCTGATCGCGGGCCTGTCGATCGGTTTCCAGAATGCCGCGCGCTA TGGCCTGATCGTCTGGGTGCCGGTCCACTTCCTGGGCAAGAACTGGAAGAGCGCCGAGACCCTGATCGACCCGGCCTGGA TCTCGGTGGCGCTGCCGGTGGGCATGGCCTTCGGCGCGCTGTCCAACGGCTGGATTTCCGACCGCCTGTTCGGCTCCAGC CGCAGCAAGGCCATCATGCTCTACATGGTGCTGGGTGCGATTGCCTCGATGATCATGTACCAGCTGCCCACGGGCATGGG CGCGATCGTCGCGCTGTTCCTTGCCGGCTTCTTCGTGTACGGCCCCGCCTCGTCCTTCTGGGCGCTGTGCCCGGACCTGG TCGGCGCCAAGCGGGCCGGCACCGCCACCGGTATCCTGAACTTCTTCTCGTACCTGCTCGCAGGCCTGGGCGAACCCCTG ATCGGCCGCATCCTGGACCAGTCCGGCAATACCTCGCTGGTGTTCCCGATCGTGGCAACCAGCTGCATCATCAGCGCCGT GATCGCGGCCTTCATCCGCCGCTGA
Upstream 100 bases:
>100_bases ATCGGCGCTGTGCCGGCCTAGTAGCACGACCCCCGGCCGACGGGTGCAGCCGGCCAACACGAGCCCGCAATACGGGCCGA CAATACAAGAGGAGACAAAA
Downstream 100 bases:
>100_bases GCGCGCCGGGCCGGCGCCTTGCCGGCCCGCCCGCGACGGCTGCATCTCCTTCCACACACTGCTCAAGACCCGAGAGGGCA AGCTCATGACCGCATTGCAA
Product: 2-phosphonopropionate transporter
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: G-3-P transporter; G-3-P permease [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues METADRIQAGAFVAPAEHSFRRAQWRMLLAAMFCYFFFYTGRQTFGFAIPGIQQEFGFSKEALGWASTCLLWCYAIGQAI NGNLGDKFGGRRVMTAGAILSCAANWVVSFAVGFKSLAIPWGINGYFQALGWAPGSRLLSNWWGAEERGKVYGFYVFAAG CASVLSFVTSIVVVNILHLDWRWIFRLPVLLMLVGGITFFLIVRERPEDLGFKSPDTGVAKAEGAEKATAVETDAGESSW SRYKAVLRNPRLLIAGLSIGFQNAARYGLIVWVPVHFLGKNWKSAETLIDPAWISVALPVGMAFGALSNGWISDRLFGSS RSKAIMLYMVLGAIASMIMYQLPTGMGAIVALFLAGFFVYGPASSFWALCPDLVGAKRAGTATGILNFFSYLLAGLGEPL IGRILDQSGNTSLVFPIVATSCIISAVIAAFIRR
Sequences:
>Translated_434_residues METADRIQAGAFVAPAEHSFRRAQWRMLLAAMFCYFFFYTGRQTFGFAIPGIQQEFGFSKEALGWASTCLLWCYAIGQAI NGNLGDKFGGRRVMTAGAILSCAANWVVSFAVGFKSLAIPWGINGYFQALGWAPGSRLLSNWWGAEERGKVYGFYVFAAG CASVLSFVTSIVVVNILHLDWRWIFRLPVLLMLVGGITFFLIVRERPEDLGFKSPDTGVAKAEGAEKATAVETDAGESSW SRYKAVLRNPRLLIAGLSIGFQNAARYGLIVWVPVHFLGKNWKSAETLIDPAWISVALPVGMAFGALSNGWISDRLFGSS RSKAIMLYMVLGAIASMIMYQLPTGMGAIVALFLAGFFVYGPASSFWALCPDLVGAKRAGTATGILNFFSYLLAGLGEPL IGRILDQSGNTSLVFPIVATSCIISAVIAAFIRR >Mature_434_residues METADRIQAGAFVAPAEHSFRRAQWRMLLAAMFCYFFFYTGRQTFGFAIPGIQQEFGFSKEALGWASTCLLWCYAIGQAI NGNLGDKFGGRRVMTAGAILSCAANWVVSFAVGFKSLAIPWGINGYFQALGWAPGSRLLSNWWGAEERGKVYGFYVFAAG CASVLSFVTSIVVVNILHLDWRWIFRLPVLLMLVGGITFFLIVRERPEDLGFKSPDTGVAKAEGAEKATAVETDAGESSW SRYKAVLRNPRLLIAGLSIGFQNAARYGLIVWVPVHFLGKNWKSAETLIDPAWISVALPVGMAFGALSNGWISDRLFGSS RSKAIMLYMVLGAIASMIMYQLPTGMGAIVALFLAGFFVYGPASSFWALCPDLVGAKRAGTATGILNFFSYLLAGLGEPL IGRILDQSGNTSLVFPIVATSCIISAVIAAFIRR
Specific function: Responsible for glycerol-3-phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219598, Length=387, Percent_Identity=24.031007751938, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI4503847, Length=387, Percent_Identity=24.031007751938, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI256219483, Length=387, Percent_Identity=24.031007751938, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI256219543, Length=325, Percent_Identity=24.3076923076923, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI46361976, Length=411, Percent_Identity=26.0340632603406, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI223717983, Length=423, Percent_Identity=24.113475177305, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI38093649, Length=423, Percent_Identity=24.113475177305, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788573, Length=396, Percent_Identity=25.7575757575758, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI87082310, Length=419, Percent_Identity=25.2983293556086, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87082320, Length=404, Percent_Identity=25, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI2367379, Length=429, Percent_Identity=23.7762237762238, Blast_Score=75, Evalue=1e-14, Organism=Caenorhabditis elegans, GI133901856, Length=346, Percent_Identity=26.3005780346821, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI133901854, Length=346, Percent_Identity=26.3005780346821, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI133930953, Length=452, Percent_Identity=22.1238938053097, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17542316, Length=396, Percent_Identity=23.4848484848485, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005267 - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47123; Mature: 47123
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METADRIQAGAFVAPAEHSFRRAQWRMLLAAMFCYFFFYTGRQTFGFAIPGIQQEFGFSK CCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHCCCH EALGWASTCLLWCYAIGQAINGNLGDKFGGRRVMTAGAILSCAANWVVSFAVGFKSLAIP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECC WGINGYFQALGWAPGSRLLSNWWGAEERGKVYGFYVFAAGCASVLSFVTSIVVVNILHLD CCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH WRWIFRLPVLLMLVGGITFFLIVRERPEDLGFKSPDTGVAKAEGAEKATAVETDAGESSW HHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHEEECCCCCHHH SRYKAVLRNPRLLIAGLSIGFQNAARYGLIVWVPVHFLGKNWKSAETLIDPAWISVALPV HHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEEEHHHHCCCCCCHHHHCCHHHHHHHHHH GMAFGALSNGWISDRLFGSSRSKAIMLYMVLGAIASMIMYQLPTGMGAIVALFLAGFFVY HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GPASSFWALCPDLVGAKRAGTATGILNFFSYLLAGLGEPLIGRILDQSGNTSLVFPIVAT CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHH SCIISAVIAAFIRR HHHHHHHHHHHHCC >Mature Secondary Structure METADRIQAGAFVAPAEHSFRRAQWRMLLAAMFCYFFFYTGRQTFGFAIPGIQQEFGFSK CCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHCCCH EALGWASTCLLWCYAIGQAINGNLGDKFGGRRVMTAGAILSCAANWVVSFAVGFKSLAIP HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHEECC WGINGYFQALGWAPGSRLLSNWWGAEERGKVYGFYVFAAGCASVLSFVTSIVVVNILHLD CCCCHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH WRWIFRLPVLLMLVGGITFFLIVRERPEDLGFKSPDTGVAKAEGAEKATAVETDAGESSW HHHHHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCHHHEEECCCCCHHH SRYKAVLRNPRLLIAGLSIGFQNAARYGLIVWVPVHFLGKNWKSAETLIDPAWISVALPV HHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEEEHHHHCCCCCCHHHHCCHHHHHHHHHH GMAFGALSNGWISDRLFGSSRSKAIMLYMVLGAIASMIMYQLPTGMGAIVALFLAGFFVY HHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GPASSFWALCPDLVGAKRAGTATGILNFFSYLLAGLGEPLIGRILDQSGNTSLVFPIVAT CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHHHH SCIISAVIAAFIRR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8012593; 9384377 [H]