| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694607
Identifier: 116694607
GI number: 116694607
Start: 730585
End: 731385
Strand: Direct
Name: 116694607
Synonym: H16_B0656
Alternate gene names: NA
Gene position: 730585-731385 (Clockwise)
Preceding gene: 116694606
Following gene: 116694608
Centisome position: 25.08
GC content: 70.79
Gene sequence:
>801_bases GTGAGCGCCACTTATGAATTCACCCGCGCCGAGCTGATGATTGCCGCCGCCGCCCGCGAATGGCGCGACGACGGCGAGGT GCTGGCCACCGGCATCGGCACCGGCCCGCGCATCGCCGCCAGCCTGGCGCGGCTTGCGCACAACCCGGGCCTGCTGCTGA CCGACGGCGAGGCCTACCTGGTGGAAACGCCGGTGCCGCTGGGCCCGCGCGAGCCCGGCTACAAGGTGCGCGCCAGCGGC TGGATGGGCTACTCGCGCGTGTTCGACTGCCTGTGGGGCGGGCGGCGCCATGCGCTGGTGATGCCGACACAGATCGACCG CTTCGGCCAGGCCAATATTTCCTGCCTGGGCGGCACCCATGCGCAGCCCAGGACCCAGCTGCTGGGCGCGCGCGGCTTTC CCGGCAACAGCATCCACCACGCCAATTCCTTCTTCGTGCCGGCGCACAGCACGCGCGCGTTCGTCGCCGGTGAAGTCGAC ATGGTCTGCAGCGCCGGCTACAACCCGGCCCGCCGGCTGGAGGGCATGCGCAGCTTCGTTGACCTGCGCGTGATTGTCAC CGACCTGTGCGTGATGGATTTCGGGGGGGCTGACCATGCCATCCGCGTGCGCTCGCTGCACCCGGGGGCGAGCTTCGACC AGGTACAGGCGGCCACCGGCTTTGCGCTGGCGAACACGCCCGGCGAGGCCCTGCCGGAGACGGCGCCGCCGACACCGGAA GAGCTGCGGCTGATCGCCCAGCTTGATCCGCACAACCTGCGCGCGGCCATCGTGCGCGGCAATCCTTCCGGACGCGTGTG A
Upstream 100 bases:
>100_bases GCGCGAGCGAAGCGGCCTACCTGGAGCGCATCGGCGGCCTTGGCCACGTGCACGACCTGCCGCTGCCGGTACTTTGAACC CGCCAACCCAAGGAGCGACC
Downstream 100 bases:
>100_bases GGCCGACATGACAACGCCAGCTACCGAAGCCATCAGCCTTGGCCCCAATGCCGAGGTGCTCTACCAGGTCGCGGACGGCA TTGCCACCGTGACCATGAAC
Product: Acyl CoA:acetate/3-ketoacid CoA transferase,beta subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSATYEFTRAELMIAAAAREWRDDGEVLATGIGTGPRIAASLARLAHNPGLLLTDGEAYLVETPVPLGPREPGYKVRASG WMGYSRVFDCLWGGRRHALVMPTQIDRFGQANISCLGGTHAQPRTQLLGARGFPGNSIHHANSFFVPAHSTRAFVAGEVD MVCSAGYNPARRLEGMRSFVDLRVIVTDLCVMDFGGADHAIRVRSLHPGASFDQVQAATGFALANTPGEALPETAPPTPE ELRLIAQLDPHNLRAAIVRGNPSGRV
Sequences:
>Translated_266_residues MSATYEFTRAELMIAAAAREWRDDGEVLATGIGTGPRIAASLARLAHNPGLLLTDGEAYLVETPVPLGPREPGYKVRASG WMGYSRVFDCLWGGRRHALVMPTQIDRFGQANISCLGGTHAQPRTQLLGARGFPGNSIHHANSFFVPAHSTRAFVAGEVD MVCSAGYNPARRLEGMRSFVDLRVIVTDLCVMDFGGADHAIRVRSLHPGASFDQVQAATGFALANTPGEALPETAPPTPE ELRLIAQLDPHNLRAAIVRGNPSGRV >Mature_265_residues SATYEFTRAELMIAAAAREWRDDGEVLATGIGTGPRIAASLARLAHNPGLLLTDGEAYLVETPVPLGPREPGYKVRASGW MGYSRVFDCLWGGRRHALVMPTQIDRFGQANISCLGGTHAQPRTQLLGARGFPGNSIHHANSFFVPAHSTRAFVAGEVDM VCSAGYNPARRLEGMRSFVDLRVIVTDLCVMDFGGADHAIRVRSLHPGASFDQVQAATGFALANTPGEALPETAPPTPEE LRLIAQLDPHNLRAAIVRGNPSGRV
Specific function: Probable subunit of a CoA-transferase composed of Rv3551 and Rv3552 [H]
COG id: COG2057
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28534; Mature: 28403
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATYEFTRAELMIAAAAREWRDDGEVLATGIGTGPRIAASLARLAHNPGLLLTDGEAYL CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCEEE VETPVPLGPREPGYKVRASGWMGYSRVFDCLWGGRRHALVMPTQIDRFGQANISCLGGTH EECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCCCCCEEEECCCC AQPRTQLLGARGFPGNSIHHANSFFVPAHSTRAFVAGEVDMVCSAGYNPARRLEGMRSFV CCCHHHHEECCCCCCCCEECCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHH DLRVIVTDLCVMDFGGADHAIRVRSLHPGASFDQVQAATGFALANTPGEALPETAPPTPE HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCEEEECCCCHHCCCCCCCCHH ELRLIAQLDPHNLRAAIVRGNPSGRV HEEEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure SATYEFTRAELMIAAAAREWRDDGEVLATGIGTGPRIAASLARLAHNPGLLLTDGEAYL CCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCEEE VETPVPLGPREPGYKVRASGWMGYSRVFDCLWGGRRHALVMPTQIDRFGQANISCLGGTH EECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEECHHHHCCCCCCEEEECCCC AQPRTQLLGARGFPGNSIHHANSFFVPAHSTRAFVAGEVDMVCSAGYNPARRLEGMRSFV CCCHHHHEECCCCCCCCEECCCEEEEECCCCCEEEECCEEEEEECCCCHHHHHHHHHHHH DLRVIVTDLCVMDFGGADHAIRVRSLHPGASFDQVQAATGFALANTPGEALPETAPPTPE HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHCCEEEECCCCHHCCCCCCCCHH ELRLIAQLDPHNLRAAIVRGNPSGRV HEEEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]