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The map label for this gene is 116694592

Identifier: 116694592

GI number: 116694592

Start: 715567

End: 717273

Strand: Direct

Name: 116694592

Synonym: H16_B0641

Alternate gene names: NA

Gene position: 715567-717273 (Clockwise)

Preceding gene: 116694591

Following gene: 116694593

Centisome position: 24.57

GC content: 72.47

Gene sequence:

>1707_bases
ATGTACCCTCCGACCGATTCCGCCACGCCGGTCCACGCGCCGCTGCGCCTCGACGATCCGGACGCACACCCGTGGCAGGC
CGCCTGCGATGCCGTGGTGGTGGGCTTCGGCGCCGCCGGGGCCTGCGCCGCGCTGGAGGCCGCGCATGGCGGCGCGCGCG
TGATCGTTGCGGAACGCTTCGAAGGCGGGGGCGCCAGCGCCAAGAGCGGCGGGGTGGTCTACGCCGGCGGCGGCACGCCC
TACCAGTCTGCCGCGGGCTATGCCGATACACCGCAGGCGATGGCGGACTACCTGCGCCAGGAGACGGGCGGGGTCGTCAG
CGATGCCACGCTGCAGGCGTTCTGTCAGCGCAGCCGCGAGATGATCGGCTGGCTTGAAGGCCTGGGCGTGGGCTTTGCCG
CCACCGTGCCGCCGCGCAAGACCTCGTATCCGGCGCAGCCCTACTACCTCTACTACTCCGGCAACGAAGCGGTCGCCGCC
TACGCGCAGCATGCCGCGCCCGCGCCGCGCGGTCACCGCGTGAAAGGCCCCGGCATGTCCGGCCGCACGCTGTACGCCGT
CCTGCGCGCCGCCGTGCAGGCCCGGCCGGAGGTGACGGTGATGCGCCAGACCGCGGCAAGGCGGCTGATTCTCGACCAGG
ACGGCGCGGTCGTCGGCATCGAGCTGTGGCAGCTGCCGCCGGGCCGCCACCAGAAACGCCACGCCCGCCTGGCGCGCCTG
GCCGAGCGCCTGCACAACGTAGCGCCTGCGCTGGCCGACCTGCTGCGCGAGCGCGTGCTGCAACTGGAACTGCGCCATGC
GCGCCCGGTCGCGGTGCGCACCGGCGCGGTGGTGCTGGCCACCGGCGGCTTTATCTTCAACCGCGCCATGGTGGCGCGCC
ACGCCGGCAAATACCTGCAGAACTGGCGCCTTGGCGCGACCGGCTGCGACGGCAGCGGCATCCGCCTTGGTGAGTCGGCG
GGCGCGGCCACGCGGCACCTGGAGCGGGTCTCGGCATGGCGCTTCATCAATCCGCCGTTCGACTGGGCGCGCGGCTGCGT
GGTCGATGCGCAGGGTGCGCGCATCGCCAACGAGGAAACCTACGGCGCCACCCTTGGCCACGCCATCTGCGAACAGCACG
GCGGGCGGGCCTGGCTGGTCCTGAACCGCGAACTGGCGCGCGCCGCGCTGCGTGAATGCCTGGGCGGCCGGCTGTGGGCC
TTCCAGGCCTTGCCCGCGGCGCTGCTGATGCTGGCGGGGGCGCGGCGTGCCTCCAGCCTCGAAGCGCTTGCCGGCAAGCT
GGGCATGCCCGGCGCGGCGCTGCGGGCCACCGTCGATGCCTATAACGCCGCGGCCCGCGGCGAGATCCCGGATCCGGCCG
GCAAATCGGCGCCGATGTGCGCGTCGCTCGAAACCGGGCCGTGGCTTGCCATCGACATCTCGGCCAACAGCCGCGTCTTT
CCGTGCCCTGCCATCACGCTGGGCGGATTGTCGGTGGAAGAGTCCAGCGGCCGTGTACTGGCCGCCGCTGGCGGGGCGCC
CATTCCAGGGCTCTACGCCGTGGGCCGCACTGCCGTTGGCATCGCATCCAACCATTACGTAAGCGGCCTGTCGCTTGCCG
ACTGCATCTGGTCGGGGCGCAACGCGGGCCGCCATCTGACACGACAGCCTGCCGGCGACCGGCAGGCACACACCAACGAG
GAGACCACCCATGAGCCAACGTACTGA

Upstream 100 bases:

>100_bases
GCTGGCGAGGTGTCGCCGCTGGTCTATGTCGATGGTGCCTACACCACGTCCGCGCCGCTTGGCGCACTGTGTTCGGCCTA
AGCCGGGAGCGCAAGCCAGC

Downstream 100 bases:

>100_bases
AGGAAAGATCGCCATCGTCACCGGGGCCGCCAGCGGCGTCGGCAAGGAAGACGCGCTGCTGCTGGCGCGCGAGGGCGCGC
GCGTGGTGCTGACCGACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Flavocytochrome c; FL cyt [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MYPPTDSATPVHAPLRLDDPDAHPWQAACDAVVVGFGAAGACAALEAAHGGARVIVAERFEGGGASAKSGGVVYAGGGTP
YQSAAGYADTPQAMADYLRQETGGVVSDATLQAFCQRSREMIGWLEGLGVGFAATVPPRKTSYPAQPYYLYYSGNEAVAA
YAQHAAPAPRGHRVKGPGMSGRTLYAVLRAAVQARPEVTVMRQTAARRLILDQDGAVVGIELWQLPPGRHQKRHARLARL
AERLHNVAPALADLLRERVLQLELRHARPVAVRTGAVVLATGGFIFNRAMVARHAGKYLQNWRLGATGCDGSGIRLGESA
GAATRHLERVSAWRFINPPFDWARGCVVDAQGARIANEETYGATLGHAICEQHGGRAWLVLNRELARAALRECLGGRLWA
FQALPAALLMLAGARRASSLEALAGKLGMPGAALRATVDAYNAAARGEIPDPAGKSAPMCASLETGPWLAIDISANSRVF
PCPAITLGGLSVEESSGRVLAAAGGAPIPGLYAVGRTAVGIASNHYVSGLSLADCIWSGRNAGRHLTRQPAGDRQAHTNE
ETTHEPTY

Sequences:

>Translated_568_residues
MYPPTDSATPVHAPLRLDDPDAHPWQAACDAVVVGFGAAGACAALEAAHGGARVIVAERFEGGGASAKSGGVVYAGGGTP
YQSAAGYADTPQAMADYLRQETGGVVSDATLQAFCQRSREMIGWLEGLGVGFAATVPPRKTSYPAQPYYLYYSGNEAVAA
YAQHAAPAPRGHRVKGPGMSGRTLYAVLRAAVQARPEVTVMRQTAARRLILDQDGAVVGIELWQLPPGRHQKRHARLARL
AERLHNVAPALADLLRERVLQLELRHARPVAVRTGAVVLATGGFIFNRAMVARHAGKYLQNWRLGATGCDGSGIRLGESA
GAATRHLERVSAWRFINPPFDWARGCVVDAQGARIANEETYGATLGHAICEQHGGRAWLVLNRELARAALRECLGGRLWA
FQALPAALLMLAGARRASSLEALAGKLGMPGAALRATVDAYNAAARGEIPDPAGKSAPMCASLETGPWLAIDISANSRVF
PCPAITLGGLSVEESSGRVLAAAGGAPIPGLYAVGRTAVGIASNHYVSGLSLADCIWSGRNAGRHLTRQPAGDRQAHTNE
ETTHEPTY
>Mature_568_residues
MYPPTDSATPVHAPLRLDDPDAHPWQAACDAVVVGFGAAGACAALEAAHGGARVIVAERFEGGGASAKSGGVVYAGGGTP
YQSAAGYADTPQAMADYLRQETGGVVSDATLQAFCQRSREMIGWLEGLGVGFAATVPPRKTSYPAQPYYLYYSGNEAVAA
YAQHAAPAPRGHRVKGPGMSGRTLYAVLRAAVQARPEVTVMRQTAARRLILDQDGAVVGIELWQLPPGRHQKRHARLARL
AERLHNVAPALADLLRERVLQLELRHARPVAVRTGAVVLATGGFIFNRAMVARHAGKYLQNWRLGATGCDGSGIRLGESA
GAATRHLERVSAWRFINPPFDWARGCVVDAQGARIANEETYGATLGHAICEQHGGRAWLVLNRELARAALRECLGGRLWA
FQALPAALLMLAGARRASSLEALAGKLGMPGAALRATVDAYNAAARGEIPDPAGKSAPMCASLETGPWLAIDISANSRVF
PCPAITLGGLSVEESSGRVLAAAGGAPIPGLYAVGRTAVGIASNHYVSGLSLADCIWSGRNAGRHLTRQPAGDRQAHTNE
ETTHEPTY

Specific function: Catalyzes fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown, but evidence indicates that flavocytochrome c participates in electron transfer from formate to fumarate and possibly also to tr

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI71986328, Length=546, Percent_Identity=24.3589743589744, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031
- InterPro:   IPR012286 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 59743; Mature: 59743

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPPTDSATPVHAPLRLDDPDAHPWQAACDAVVVGFGAAGACAALEAAHGGARVIVAERF
CCCCCCCCCCCCCCEEECCCCCCCHHHHHCEEEEECCCCHHHHHHHHCCCCEEEEEEEEC
EGGGASAKSGGVVYAGGGTPYQSAAGYADTPQAMADYLRQETGGVVSDATLQAFCQRSRE
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
MIGWLEGLGVGFAATVPPRKTSYPAQPYYLYYSGNEAVAAYAQHAAPAPRGHRVKGPGMS
HHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEECCCCCC
GRTLYAVLRAAVQARPEVTVMRQTAARRLILDQDGAVVGIELWQLPPGRHQKRHARLARL
CHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHH
AERLHNVAPALADLLRERVLQLELRHARPVAVRTGAVVLATGGFIFNRAMVARHAGKYLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHH
NWRLGATGCDGSGIRLGESAGAATRHLERVSAWRFINPPFDWARGCVVDAQGARIANEET
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEECCCCH
YGATLGHAICEQHGGRAWLVLNRELARAALRECLGGRLWAFQALPAALLMLAGARRASSL
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
EALAGKLGMPGAALRATVDAYNAAARGEIPDPAGKSAPMCASLETGPWLAIDISANSRVF
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEC
PCPAITLGGLSVEESSGRVLAAAGGAPIPGLYAVGRTAVGIASNHYVSGLSLADCIWSGR
CCCCEEECCEEEECCCCCEEEECCCCCCCCHHHHCCHHEEECCCCEECCCHHHHHHHCCC
NAGRHLTRQPAGDRQAHTNEETTHEPTY
CCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYPPTDSATPVHAPLRLDDPDAHPWQAACDAVVVGFGAAGACAALEAAHGGARVIVAERF
CCCCCCCCCCCCCCEEECCCCCCCHHHHHCEEEEECCCCHHHHHHHHCCCCEEEEEEEEC
EGGGASAKSGGVVYAGGGTPYQSAAGYADTPQAMADYLRQETGGVVSDATLQAFCQRSRE
CCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
MIGWLEGLGVGFAATVPPRKTSYPAQPYYLYYSGNEAVAAYAQHAAPAPRGHRVKGPGMS
HHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEECCCCCC
GRTLYAVLRAAVQARPEVTVMRQTAARRLILDQDGAVVGIELWQLPPGRHQKRHARLARL
CHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHH
AERLHNVAPALADLLRERVLQLELRHARPVAVRTGAVVLATGGFIFNRAMVARHAGKYLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHH
NWRLGATGCDGSGIRLGESAGAATRHLERVSAWRFINPPFDWARGCVVDAQGARIANEET
CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCCEECCCCH
YGATLGHAICEQHGGRAWLVLNRELARAALRECLGGRLWAFQALPAALLMLAGARRASSL
HHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
EALAGKLGMPGAALRATVDAYNAAARGEIPDPAGKSAPMCASLETGPWLAIDISANSRVF
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCEEC
PCPAITLGGLSVEESSGRVLAAAGGAPIPGLYAVGRTAVGIASNHYVSGLSLADCIWSGR
CCCCEEECCEEEECCCCCEEEECCCCCCCCHHHHCCHHEEECCCCEECCCHHHHHHHCCC
NAGRHLTRQPAGDRQAHTNEETTHEPTY
CCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11425747; 12368813; 10581551 [H]