| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116694524
Identifier: 116694524
GI number: 116694524
Start: 645443
End: 646282
Strand: Direct
Name: 116694524
Synonym: H16_B0573
Alternate gene names: NA
Gene position: 645443-646282 (Clockwise)
Preceding gene: 116694523
Following gene: 116694525
Centisome position: 22.16
GC content: 72.14
Gene sequence:
>840_bases ATGTCTCTCACGGTCTTCGCTGTCGTCCTGCTCGCCGCGTTCCTGCATGCCGCCTGGAACGCGGTGGTCAAGGGCGGCGG CGACAAGATGCTGTCGACGGTGATGGTGGCGGTGAGCGCCGGACTGACGGGCGCCGTGGCGCTGCCGGCGTTGCCGCAGC CGGCGCCGGCGAGCTGGCCGTTCATCGCCGCGTCAGTGGGCGTGCACGTGGTGTATTTCGCGCTGGTGGCACGCATCTAC CACACCGCGGACATGAGCCAGACCTACCCCCTGATGCGCGGCACCGCGCCGCTGCTGGTGGCGGTGGCCAGCGTGGGCTG GCTGGGCGAGCACCTGTCGGCGCTGGCGTGGAGCGGCATCGCCGTGATCAGCCTGGGCATCCTGGCCATGGCGGGTGGTG CCCGCGGTGCCCCTGGCAGCCGTGAGGGCATGTGGCTGGCGCTGCTGAACGCAGTGGTGATCGCCGCCTATACGCTGATC GACGGCACCGGCGTGCGCCGCTCCGGCGCACCTGTGGCGTATGCATTCTGGATCTTCGTGCTGACCGCGGTGCCGCTGGC GGCGTGGGCGCTGGTGGCGCGCCGGCCGGCACTGGGCGGCTATGTGCGGCGCAACCTGGTGTTCGCGCTGGTGGGCGGCG GCGGCACGCTGGCGTCCTATGGGCTGTCGCTGTGGGCGATGACACGCGCGCCGGTGGCCCCGGTAGCGGCCCTGCGTGAG TCCTCGATCCTGTTCGGCGCGTTGATCTCCGGGCTGCTGCTCAAGGAGCGCGTGGGCGCCGCCCGCCTGGGCGCGGCCTG CCTGATTGCCGCCGGCGTGGCCACGCTGCGCTTTGCCTGA
Upstream 100 bases:
>100_bases GGCGGGTCAGCGGCGCGAAGTAGGCGGGCCAGGGCGCGGCAGCGGCGGCACCGCACCGCTAGAATGACGGCGTCCCCACA CGCCGAGCCCGCTGCCGTCC
Downstream 100 bases:
>100_bases GGGCACGTCCGGGTGCCGCTCTGAACGCCCGGCCGCTGAGCGCCGCCAGCGCTGTCTATACTTGGTTTTACCGGGGTCAG ACGGCGGAGGGGCACTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Transporter Of DMT Superfamily; Transporter Dme Family; DMT Family Permease; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Small Multidrug Resistance Protein; Permease Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSLTVFAVVLLAAFLHAAWNAVVKGGGDKMLSTVMVAVSAGLTGAVALPALPQPAPASWPFIAASVGVHVVYFALVARIY HTADMSQTYPLMRGTAPLLVAVASVGWLGEHLSALAWSGIAVISLGILAMAGGARGAPGSREGMWLALLNAVVIAAYTLI DGTGVRRSGAPVAYAFWIFVLTAVPLAAWALVARRPALGGYVRRNLVFALVGGGGTLASYGLSLWAMTRAPVAPVAALRE SSILFGALISGLLLKERVGAARLGAACLIAAGVATLRFA
Sequences:
>Translated_279_residues MSLTVFAVVLLAAFLHAAWNAVVKGGGDKMLSTVMVAVSAGLTGAVALPALPQPAPASWPFIAASVGVHVVYFALVARIY HTADMSQTYPLMRGTAPLLVAVASVGWLGEHLSALAWSGIAVISLGILAMAGGARGAPGSREGMWLALLNAVVIAAYTLI DGTGVRRSGAPVAYAFWIFVLTAVPLAAWALVARRPALGGYVRRNLVFALVGGGGTLASYGLSLWAMTRAPVAPVAALRE SSILFGALISGLLLKERVGAARLGAACLIAAGVATLRFA >Mature_278_residues SLTVFAVVLLAAFLHAAWNAVVKGGGDKMLSTVMVAVSAGLTGAVALPALPQPAPASWPFIAASVGVHVVYFALVARIYH TADMSQTYPLMRGTAPLLVAVASVGWLGEHLSALAWSGIAVISLGILAMAGGARGAPGSREGMWLALLNAVVIAAYTLID GTGVRRSGAPVAYAFWIFVLTAVPLAAWALVARRPALGGYVRRNLVFALVGGGGTLASYGLSLWAMTRAPVAPVAALRES SILFGALISGLLLKERVGAARLGAACLIAAGVATLRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28470; Mature: 28339
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVFAVVLLAAFLHAAWNAVVKGGGDKMLSTVMVAVSAGLTGAVALPALPQPAPASWP CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC FIAASVGVHVVYFALVARIYHTADMSQTYPLMRGTAPLLVAVASVGWLGEHLSALAWSGI HHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVISLGILAMAGGARGAPGSREGMWLALLNAVVIAAYTLIDGTGVRRSGAPVAYAFWIFV HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LTAVPLAAWALVARRPALGGYVRRNLVFALVGGGGTLASYGLSLWAMTRAPVAPVAALRE HHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHH SSILFGALISGLLLKERVGAARLGAACLIAAGVATLRFA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLTVFAVVLLAAFLHAAWNAVVKGGGDKMLSTVMVAVSAGLTGAVALPALPQPAPASWP CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCC FIAASVGVHVVYFALVARIYHTADMSQTYPLMRGTAPLLVAVASVGWLGEHLSALAWSGI HHHHHHHHHHHHHHHHHHHHHHHCCHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AVISLGILAMAGGARGAPGSREGMWLALLNAVVIAAYTLIDGTGVRRSGAPVAYAFWIFV HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH LTAVPLAAWALVARRPALGGYVRRNLVFALVGGGGTLASYGLSLWAMTRAPVAPVAALRE HHHHHHHHHHHHHHCCCHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHH SSILFGALISGLLLKERVGAARLGAACLIAAGVATLRFA HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA