Click here to switch to the map view.

The map label for this gene is poxD [H]

Identifier: 116694493

GI number: 116694493

Start: 612831

End: 614351

Strand: Direct

Name: poxD [H]

Synonym: H16_B0542

Alternate gene names: 116694493

Gene position: 612831-614351 (Clockwise)

Preceding gene: 116694492

Following gene: 116694494

Centisome position: 21.04

GC content: 64.5

Gene sequence:

>1521_bases
ATGGACGCACGCAAGAAGCTCAACCTGCGCGAGAAGTACGCCTCGATGACGCGGGACCTGGCCTGGGAAACGACCTACGA
GCCGATGGACAAGGTCTTCCCGTTCGACAAGTACGAGGGCATCCGCATCCACGACTGGGACAAATGGGAAGACCCGTTCC
GCATGACCATGGATGCCTACTGGAAGTACCAGTCGGAGAAGGAGCGCAAGCTGTACGCGATCATCGACTCGTTCGTGCAG
AACAACGGCCACCTGAACGTATCCGACCCGCGCTACCTGAACGCGCTGCGGTTGTTCCTGACCGGCGTGACGCCGCTGGA
ATACGCCGCCCACCGCGGCTACGCGCACCTGGGCCGCCATTTCCGCGGCGCCGGCGCGCGCGTGGCGGCGCAGATGCAGT
CGGTCGACGAGCTGCGCCACGCCCAGACCCAGCTGCACACGCTGTCGGTCTACAACAAGTACTTCCACGGCTTTGGCGAA
TGGCGCCACATGCACGACCGGGTCTGGTACCTGTCGGTGCCCAAGTCCTACTTCGAGGACGCGATGAGCGCGGGGCCGTT
CGAGTTCATCACCGCGATCTCGTTCTCGTTCGAGTATGTGCTGACCAACCTGCTGTTCATGCCGTTCATGTCCGGCGCCG
CCTACAACGGCGACATGGCCACGGTGACCTTCGGCTTCTCCGCGCAGTCCGACGAGTCGCGCCACATGACGCTGGGCCTG
GAAGTGGTCAAGTTCCTGTGCGAGCAGGACCCCGGCAATATCCCGATCCTGCAGAAGTGGCTGGACAAGTGGTTCTGGCG
CGGCTTCCGACTGCTCACGCTGGTCGGCATGATGATGGACTACATGCTGCCCAAGCGCGTGATGTCGTGGGCCGAGGCCT
GGGAGATGTACTTCGAGCAGGCGGGCGGGGCCCTGTTCAAGGATCTGGAGCGCTACGGCCTGCGCATGCCCAAGTACCAC
GAAGTGGCCACCAGGACCAAGGACCGCATCACGCACGAGGCCTGGGCCACCTTCTACAACTACGCGGGCGCCGCCGGCTT
CCACACCTGGGTGCCCAAGGCCGACGAGATGGCATGGCTGGCCGAGAAGTACCCCCAGACCTTCGAGCGCTACTACAAGC
CGCGCCTGGACCACTGGCAGGAGCGCCAGCAGGCCGGCGAGCGCTTCTACAACACCACGCTGCCGATGCTGTGCCAGACC
TGCCAGATCCCGATGGTGTTCTCGGAGCCGGACGACCCGACCCAGACCTGCTACCGCGAAAGCAGCTACCACGGCATGAA
GTTCCATTTCTGCTCGGACGGCTGCAAGGACATCTTCGACGACGAGCCCGCCAAGTACGCGCAGGCCTGGCTGCCGGTGC
ACCAGATCTACCAGGGCAACTGCGGCGGCGCCACGCTGGAGGACGTGCTCAAGTGGTACCGGCTGAACCCGGGCGCTGAC
AACCTCGACTTCGAGGGCTCGCAGGACCAGCGCAACTGGAACGCGTGGAAGGGCATCGGGCCTGCCGCGGACGCCGCCTG
A

Upstream 100 bases:

>100_bases
TGATCTCGCTGTGCGGAAACATCGACGAAGACGAAGACGCCTTCACGCTGCGCTGGAACGCCTGACCGGGCAGCGGCACA
CAGAACATCACGGAGACATC

Downstream 100 bases:

>100_bases
AGCGGCCCCCATCACAAGACAAGGAGACAACCATGCCCGTCGTATCCATCGGCGACTACGCCTTCGAGGCGGCCGACCGC
GAGGCCGTGTTCCACGGCAA

Product: phenol hydroxylase P3 protein

Products: NA

Alternate protein names: Phenol 2-monooxygenase P3 component [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MDARKKLNLREKYASMTRDLAWETTYEPMDKVFPFDKYEGIRIHDWDKWEDPFRMTMDAYWKYQSEKERKLYAIIDSFVQ
NNGHLNVSDPRYLNALRLFLTGVTPLEYAAHRGYAHLGRHFRGAGARVAAQMQSVDELRHAQTQLHTLSVYNKYFHGFGE
WRHMHDRVWYLSVPKSYFEDAMSAGPFEFITAISFSFEYVLTNLLFMPFMSGAAYNGDMATVTFGFSAQSDESRHMTLGL
EVVKFLCEQDPGNIPILQKWLDKWFWRGFRLLTLVGMMMDYMLPKRVMSWAEAWEMYFEQAGGALFKDLERYGLRMPKYH
EVATRTKDRITHEAWATFYNYAGAAGFHTWVPKADEMAWLAEKYPQTFERYYKPRLDHWQERQQAGERFYNTTLPMLCQT
CQIPMVFSEPDDPTQTCYRESSYHGMKFHFCSDGCKDIFDDEPAKYAQAWLPVHQIYQGNCGGATLEDVLKWYRLNPGAD
NLDFEGSQDQRNWNAWKGIGPAADAA

Sequences:

>Translated_506_residues
MDARKKLNLREKYASMTRDLAWETTYEPMDKVFPFDKYEGIRIHDWDKWEDPFRMTMDAYWKYQSEKERKLYAIIDSFVQ
NNGHLNVSDPRYLNALRLFLTGVTPLEYAAHRGYAHLGRHFRGAGARVAAQMQSVDELRHAQTQLHTLSVYNKYFHGFGE
WRHMHDRVWYLSVPKSYFEDAMSAGPFEFITAISFSFEYVLTNLLFMPFMSGAAYNGDMATVTFGFSAQSDESRHMTLGL
EVVKFLCEQDPGNIPILQKWLDKWFWRGFRLLTLVGMMMDYMLPKRVMSWAEAWEMYFEQAGGALFKDLERYGLRMPKYH
EVATRTKDRITHEAWATFYNYAGAAGFHTWVPKADEMAWLAEKYPQTFERYYKPRLDHWQERQQAGERFYNTTLPMLCQT
CQIPMVFSEPDDPTQTCYRESSYHGMKFHFCSDGCKDIFDDEPAKYAQAWLPVHQIYQGNCGGATLEDVLKWYRLNPGAD
NLDFEGSQDQRNWNAWKGIGPAADAA
>Mature_506_residues
MDARKKLNLREKYASMTRDLAWETTYEPMDKVFPFDKYEGIRIHDWDKWEDPFRMTMDAYWKYQSEKERKLYAIIDSFVQ
NNGHLNVSDPRYLNALRLFLTGVTPLEYAAHRGYAHLGRHFRGAGARVAAQMQSVDELRHAQTQLHTLSVYNKYFHGFGE
WRHMHDRVWYLSVPKSYFEDAMSAGPFEFITAISFSFEYVLTNLLFMPFMSGAAYNGDMATVTFGFSAQSDESRHMTLGL
EVVKFLCEQDPGNIPILQKWLDKWFWRGFRLLTLVGMMMDYMLPKRVMSWAEAWEMYFEQAGGALFKDLERYGLRMPKYH
EVATRTKDRITHEAWATFYNYAGAAGFHTWVPKADEMAWLAEKYPQTFERYYKPRLDHWQERQQAGERFYNTTLPMLCQT
CQIPMVFSEPDDPTQTCYRESSYHGMKFHFCSDGCKDIFDDEPAKYAQAWLPVHQIYQGNCGGATLEDVLKWYRLNPGAD
NLDFEGSQDQRNWNAWKGIGPAADAA

Specific function: Catabolizes phenol, and some of its methylated derivatives. P3 is required for growth on phenol, and for in vitro phenol hydroxylase activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR003430
- InterPro:   IPR012348
- InterPro:   IPR007029 [H]

Pfam domain/function: PF02332 Phenol_Hydrox; PF04945 YHS [H]

EC number: =1.14.13.7 [H]

Molecular weight: Translated: 59397; Mature: 59397

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254258 [H]