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The map label for this gene is 116694363

Identifier: 116694363

GI number: 116694363

Start: 467614

End: 468786

Strand: Direct

Name: 116694363

Synonym: H16_B0410

Alternate gene names: NA

Gene position: 467614-468786 (Clockwise)

Preceding gene: 116694362

Following gene: 116694364

Centisome position: 16.06

GC content: 64.45

Gene sequence:

>1173_bases
ATGAAGAAAACAAAATTGGCCCTGGCGGTATGGGGAGCGCTTGCCGGGTTCAATGCTGCCGCGCAAACGAGCAGCGTGAC
GCTGTACGGTGTGATCGACGTGCCGATCGAGTATGTAAACCGGGTCGCCACGGCGCAGCCGACCGTGGTGAACGGGCAGC
CGGTGTTCGCTAACACCGGCGGCTCGCGCGTGTCGATGCTGCCGCTGGGCGGCAGGGCGCCGTCGCGCTGGGGACTGCGC
GGCGTGGAGGACCTGGGGGGCGGAAACAGCGCCATCTTCGTGCTGGAAAGCGGCTTCACGGCTGATTCGGGCGCCATGAC
ATCGGGCAGGCTGTTCGGCCGCCAGTCCTATGTCGGCCTGCAGAGCAAGACCTACGGCAAGCTGATGTTCGGCCGCCAGT
ACACCTCTCTTTTCGAGGGGCTGTCGAACTTCACGCCCACGCGGTATGCGTCGACGTATGACCCCGTCGCCTGGCAGCTC
GGCATCAACTATCGCGAGGACAACACGATCAAATACCTGGGCACGTTCGGCCCGGTAACGGTGGCGGCGCACTACTCGTT
TGGCGTTGGCGTGCCGCTGATTGGCGCCACGCCGCTCGCAGGCGGCGGTGCCGGCGAGACGCCGGGGGCGTTCCGCGACA
ACAACGGCTATGGCGCGGCGGTGACATACCTGAACGGCACCTTCGGCGCGACGCTGGCGTATGACGAATGGCATCCCGCG
GTCACGTCGGGCCAGCAAGGCGTCGCCCGCAAGCTTGGCACCGCCGTCAGCTATGCCGCTGGCCCGTTCAAGGCCATGCT
GGGCTATCGCTGGGCTAAGACCGACTTCGCCAATGGCAACACGCTGGCGCGCGACGACTATTACTGGGCTGGCATCAATT
ATGACATTACCCGGGCACTCGAGCTGACGCTAGCCTACTACTACGCCGACTTCAAATCCCTGCGCCTGGGGCCGACCGCG
CCGAGCCTTGCTCCCGCGAACCCGTGGCAGACGACGCTTATTCTCGACTACCGCCTCTCGAAGCGTACCGACGTCTACTT
GGCCACGGCCTACGCACGCAACGCGGGCCTGAACTTCGACTCCACACAGACCGCGTTCCTGTTCAACTATCCGTCGATGG
CCGGACAGAAGGGCATGTTCGGCGTTTCCACCGGCATTCGTCACACCTTCTGA

Upstream 100 bases:

>100_bases
GGGATTCGAAGTGCGCCGCGTACCCGGCGGTCCGGGGCCAGAGACGGTGGCCTCCGCCATTCAACCGGGGCGCAGGGGAT
CCACATGGAGAAGACGAGCT

Downstream 100 bases:

>100_bases
TCCGCAGACGGTTCGTAGCAAGGGCGGGTTGCTGCCCGCAGCCGCCCGCCACTACCGGTGCCGCGACATCCGCTCTGTGC
GGGTGCGCGCGCGGTGCCGG

Product: outer membrane protein (porin)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKKTKLALAVWGALAGFNAAAQTSSVTLYGVIDVPIEYVNRVATAQPTVVNGQPVFANTGGSRVSMLPLGGRAPSRWGLR
GVEDLGGGNSAIFVLESGFTADSGAMTSGRLFGRQSYVGLQSKTYGKLMFGRQYTSLFEGLSNFTPTRYASTYDPVAWQL
GINYREDNTIKYLGTFGPVTVAAHYSFGVGVPLIGATPLAGGGAGETPGAFRDNNGYGAAVTYLNGTFGATLAYDEWHPA
VTSGQQGVARKLGTAVSYAAGPFKAMLGYRWAKTDFANGNTLARDDYYWAGINYDITRALELTLAYYYADFKSLRLGPTA
PSLAPANPWQTTLILDYRLSKRTDVYLATAYARNAGLNFDSTQTAFLFNYPSMAGQKGMFGVSTGIRHTF

Sequences:

>Translated_390_residues
MKKTKLALAVWGALAGFNAAAQTSSVTLYGVIDVPIEYVNRVATAQPTVVNGQPVFANTGGSRVSMLPLGGRAPSRWGLR
GVEDLGGGNSAIFVLESGFTADSGAMTSGRLFGRQSYVGLQSKTYGKLMFGRQYTSLFEGLSNFTPTRYASTYDPVAWQL
GINYREDNTIKYLGTFGPVTVAAHYSFGVGVPLIGATPLAGGGAGETPGAFRDNNGYGAAVTYLNGTFGATLAYDEWHPA
VTSGQQGVARKLGTAVSYAAGPFKAMLGYRWAKTDFANGNTLARDDYYWAGINYDITRALELTLAYYYADFKSLRLGPTA
PSLAPANPWQTTLILDYRLSKRTDVYLATAYARNAGLNFDSTQTAFLFNYPSMAGQKGMFGVSTGIRHTF
>Mature_390_residues
MKKTKLALAVWGALAGFNAAAQTSSVTLYGVIDVPIEYVNRVATAQPTVVNGQPVFANTGGSRVSMLPLGGRAPSRWGLR
GVEDLGGGNSAIFVLESGFTADSGAMTSGRLFGRQSYVGLQSKTYGKLMFGRQYTSLFEGLSNFTPTRYASTYDPVAWQL
GINYREDNTIKYLGTFGPVTVAAHYSFGVGVPLIGATPLAGGGAGETPGAFRDNNGYGAAVTYLNGTFGATLAYDEWHPA
VTSGQQGVARKLGTAVSYAAGPFKAMLGYRWAKTDFANGNTLARDDYYWAGINYDITRALELTLAYYYADFKSLRLGPTA
PSLAPANPWQTTLILDYRLSKRTDVYLATAYARNAGLNFDSTQTAFLFNYPSMAGQKGMFGVSTGIRHTF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 41756; Mature: 41756

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTKLALAVWGALAGFNAAAQTSSVTLYGVIDVPIEYVNRVATAQPTVVNGQPVFANTG
CCCCEEEHEEHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCEEEEECC
GSRVSMLPLGGRAPSRWGLRGVEDLGGGNSAIFVLESGFTADSGAMTSGRLFGRQSYVGL
CCEEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEECC
QSKTYGKLMFGRQYTSLFEGLSNFTPTRYASTYDPVAWQLGINYREDNTIKYLGTFGPVT
CCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECEECCCCEEEEEECCCCEE
VAAHYSFGVGVPLIGATPLAGGGAGETPGAFRDNNGYGAAVTYLNGTFGATLAYDEWHPA
EEEEEECCCCCCEECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCCC
VTSGQQGVARKLGTAVSYAAGPFKAMLGYRWAKTDFANGNTLARDDYYWAGINYDITRAL
CCCCCHHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCEEECCCEEEECCCCCHHHHH
ELTLAYYYADFKSLRLGPTAPSLAPANPWQTTLILDYRLSKRTDVYLATAYARNAGLNFD
HHHHHEEEHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEHHCCCCCCC
STQTAFLFNYPSMAGQKGMFGVSTGIRHTF
CCCEEEEEECCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MKKTKLALAVWGALAGFNAAAQTSSVTLYGVIDVPIEYVNRVATAQPTVVNGQPVFANTG
CCCCEEEHEEHHHHHCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCEEEEECC
GSRVSMLPLGGRAPSRWGLRGVEDLGGGNSAIFVLESGFTADSGAMTSGRLFGRQSYVGL
CCEEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEECC
QSKTYGKLMFGRQYTSLFEGLSNFTPTRYASTYDPVAWQLGINYREDNTIKYLGTFGPVT
CCCCCCCEEECHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECEECCCCEEEEEECCCCEE
VAAHYSFGVGVPLIGATPLAGGGAGETPGAFRDNNGYGAAVTYLNGTFGATLAYDEWHPA
EEEEEECCCCCCEECCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCCEEEEECCCCCC
VTSGQQGVARKLGTAVSYAAGPFKAMLGYRWAKTDFANGNTLARDDYYWAGINYDITRAL
CCCCCHHHHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCEEECCCEEEECCCCCHHHHH
ELTLAYYYADFKSLRLGPTAPSLAPANPWQTTLILDYRLSKRTDVYLATAYARNAGLNFD
HHHHHEEEHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEHHCCCCCCC
STQTAFLFNYPSMAGQKGMFGVSTGIRHTF
CCCEEEEEECCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]