| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
Click here to switch to the map view.
The map label for this gene is 116694351
Identifier: 116694351
GI number: 116694351
Start: 454869
End: 455879
Strand: Direct
Name: 116694351
Synonym: H16_B0398
Alternate gene names: NA
Gene position: 454869-455879 (Clockwise)
Preceding gene: 116694350
Following gene: 116694354
Centisome position: 15.62
GC content: 70.23
Gene sequence:
>1011_bases ATGACCAGACCCCATTCGACACGCCGCCGCCACATCCTGGCGCTGGCCGCCAGCAGCGTCATCCAGACGCTGGCACCGGC CGCGCGGGCGCAGGCGCGCGGCTACCCGGACCGCCCGCTCAGGATCGTGTCCGTCGCGAGCCCGGGATCGGGCATCGACG ACTACACGCGCCTGCTGGCCAAGTTCCTGGGCGAGAAGCTGGGCCAGGGCGTGGTCGTGGAGAACCGGCCCGGGGCCAAC ATGATCATCGCCAGCGACTACGTGGCCAAGTCAGCGCCGGACGGCTATACGCTGCTGCTGACCGCATCGAGCTCGATGGC GGCGAATCCCTTCCTGTTCCGCCAGCTGCCGTACAACCCCAACAAGGACTTCGTGCCGGTGGCCCGGCTGTCGACGTTGC CCATCGTGCTGGTGGTGCCGGCCGCATCGCCATACAGGACCGTGGCCGACCTGGTCAACGCCGCGCGCGCCAATCCGGGC AAGCTCAATGGCGCCAGCAGCAGCACCGGCTACCGGCTGATGGCCGCCGCGTTCACGCAGGCGGCGGGCATCCGGACGAC CGACGTGCCGTACAAGGCGACCGCCAGCCTGCTGACGGACCTGATGGGGGGCAGCGTCGATTTCACCATGGTGGAGTTCG GGGCGGCGCTGGCGCTGATCCGCTCGAACAAGCTGCGTGCGCTTGCCATGCTGAGTCCGAAGCGGCTGCCGCAGTTGCCC GACGTGCCGACGCTGGCGGAAGCCGGCATGCGCAACGGCACGCTGGTGGAGTCGGTGTCGCGCATCAACTGGAGCGGGCT GTTCGCGCCCGCGGGCACACCGGCGCCGATCGTGGAGCGGCTCGGGCGGCTGTCGCTGGAGTTCGTCAATTCGCCGGAGG CGGCGGCGCACTACGCCAGCCGGGGCAGCCTGGCGAATCCCGGCTCGGGCCCGGAACTGGGCAAGGCGGTGCTGGACGAC CAGCAGGTCTGGAAAACGCTGATCGCCGCGGCTGGCGTGCAGCCCGAGTAG
Upstream 100 bases:
>100_bases CGCTGGATTCCCGCCTGCGCGGGAATGACGGTAGCGCTTGATGCCTTAACAGGACTACGTCATCCCCATGCAGGGGACTC AATAGAAGGAGGAGACAGGC
Downstream 100 bases:
>100_bases TGAATTAGTTAAGGTTTCTATTCCTGCTGTCATTCCCGCGAAAGCGGGAACCCAGCGTCTTTCAAAGCCACTGGGTCCCC GCTTTCGCGGGGACGACGGC
Product: extra-cytoplasmic solute receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTRPHSTRRRHILALAASSVIQTLAPAARAQARGYPDRPLRIVSVASPGSGIDDYTRLLAKFLGEKLGQGVVVENRPGAN MIIASDYVAKSAPDGYTLLLTASSSMAANPFLFRQLPYNPNKDFVPVARLSTLPIVLVVPAASPYRTVADLVNAARANPG KLNGASSSTGYRLMAAAFTQAAGIRTTDVPYKATASLLTDLMGGSVDFTMVEFGAALALIRSNKLRALAMLSPKRLPQLP DVPTLAEAGMRNGTLVESVSRINWSGLFAPAGTPAPIVERLGRLSLEFVNSPEAAAHYASRGSLANPGSGPELGKAVLDD QQVWKTLIAAAGVQPE
Sequences:
>Translated_336_residues MTRPHSTRRRHILALAASSVIQTLAPAARAQARGYPDRPLRIVSVASPGSGIDDYTRLLAKFLGEKLGQGVVVENRPGAN MIIASDYVAKSAPDGYTLLLTASSSMAANPFLFRQLPYNPNKDFVPVARLSTLPIVLVVPAASPYRTVADLVNAARANPG KLNGASSSTGYRLMAAAFTQAAGIRTTDVPYKATASLLTDLMGGSVDFTMVEFGAALALIRSNKLRALAMLSPKRLPQLP DVPTLAEAGMRNGTLVESVSRINWSGLFAPAGTPAPIVERLGRLSLEFVNSPEAAAHYASRGSLANPGSGPELGKAVLDD QQVWKTLIAAAGVQPE >Mature_335_residues TRPHSTRRRHILALAASSVIQTLAPAARAQARGYPDRPLRIVSVASPGSGIDDYTRLLAKFLGEKLGQGVVVENRPGANM IIASDYVAKSAPDGYTLLLTASSSMAANPFLFRQLPYNPNKDFVPVARLSTLPIVLVVPAASPYRTVADLVNAARANPGK LNGASSSTGYRLMAAAFTQAAGIRTTDVPYKATASLLTDLMGGSVDFTMVEFGAALALIRSNKLRALAMLSPKRLPQLPD VPTLAEAGMRNGTLVESVSRINWSGLFAPAGTPAPIVERLGRLSLEFVNSPEAAAHYASRGSLANPGSGPELGKAVLDDQ QVWKTLIAAAGVQPE
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 35381; Mature: 35250
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPHSTRRRHILALAASSVIQTLAPAARAQARGYPDRPLRIVSVASPGSGIDDYTRLLA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH KFLGEKLGQGVVVENRPGANMIIASDYVAKSAPDGYTLLLTASSSMAANPFLFRQLPYNP HHHHHHHCCCEEEECCCCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCC NKDFVPVARLSTLPIVLVVPAASPYRTVADLVNAARANPGKLNGASSSTGYRLMAAAFTQ CCCCEEHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AAGIRTTDVPYKATASLLTDLMGGSVDFTMVEFGAALALIRSNKLRALAMLSPKRLPQLP HCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCC DVPTLAEAGMRNGTLVESVSRINWSGLFAPAGTPAPIVERLGRLSLEFVNSPEAAAHYAS CCCHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCEEEECCCCHHHHHHHH RGSLANPGSGPELGKAVLDDQQVWKTLIAAAGVQPE CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCC >Mature Secondary Structure TRPHSTRRRHILALAASSVIQTLAPAARAQARGYPDRPLRIVSVASPGSGIDDYTRLLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHH KFLGEKLGQGVVVENRPGANMIIASDYVAKSAPDGYTLLLTASSSMAANPFLFRQLPYNP HHHHHHHCCCEEEECCCCCCEEEECCHHHCCCCCCEEEEEEECCCCCCCCEEEEECCCCC NKDFVPVARLSTLPIVLVVPAASPYRTVADLVNAARANPGKLNGASSSTGYRLMAAAFTQ CCCCEEHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH AAGIRTTDVPYKATASLLTDLMGGSVDFTMVEFGAALALIRSNKLRALAMLSPKRLPQLP HCCCEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHCCCCC DVPTLAEAGMRNGTLVESVSRINWSGLFAPAGTPAPIVERLGRLSLEFVNSPEAAAHYAS CCCHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHCEEEECCCCHHHHHHHH RGSLANPGSGPELGKAVLDDQQVWKTLIAAAGVQPE CCCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]