Click here to switch to the map view.

The map label for this gene is yliI [H]

Identifier: 116694253

GI number: 116694253

Start: 334674

End: 335927

Strand: Direct

Name: yliI [H]

Synonym: H16_B0299

Alternate gene names: 116694253

Gene position: 334674-335927 (Clockwise)

Preceding gene: 116694251

Following gene: 116694255

Centisome position: 11.49

GC content: 66.59

Gene sequence:

>1254_bases
GTGACCCAGTCGACCACGCTGTCCAACCTGGCTGCTGGCAGCTATACCGTCAGTGCCGCCAGCGTGCTGGCTGGCAGCAC
GCTCCTCAAGCCGCAGCCGCCTTCGCAGACCGTGGCGGTGACCGCGGGCGGCAGTGCTTTGGCAAGCGTGGAATACGGCT
CACCGGAAACAGTGCAGTTGTCGCTGACGCAGGTTGCCGGCGGGTTATCCGAGCCCATCTTCCTGACCGCGCCCCCCGGC
GATCCGCGCCTGTTCGTGGTCGAGCGGGCCGGCCGCATCCGGATCGTGCGCAACGGCGCATTGGTCGCTACGCCGTTCCT
CAATATCGCCGCGCTGACGACGACCGATGGCGAGCGCGGGCTGCTGTCGATGGCGTTCGATCCCAACTATGGGACCAACG
GCCGCTTCTACGTCTATTACACCGACACCAATGGGGCCATCACCATCGCCCGCTACAACGTATCGGCCGCGAATCCGGAT
ATCGCCGCGGCATCCGGCACCGTGCTGCTGTCGATTCCGCACGGCACCTTCTCCAACCATAACGGCGGCCAGCTCGCGTT
CGGCCCGGACGGCATGCTCTATATCGGCACGGGCGACGGCGGCGGCGGTGGCGATCCGTCGGGCAACGCCCAGAACCCGG
CAACGCTGCTCGGCAAGATGCTGCGCATCGACGTCAGCGGGGCATCCGGCTACGGCTTGCCTGCCGGCAATCCCTTCGTC
GGCCAGTCCGGCAGCCGCGGCGAAATCTGGGCTCTCGGCCTGCGCAACCCGTGGCGGTTTACGTTCGACGCCGGCTTGCT
GTATATCGCCGATGTCGGCGAGGACCAGCGCGAGGAAGTCGACGTGGCGCCGGCCACCAGCGCGGGCCTGAACTACGGCT
GGAACCGGACCGAAGGCACCGCCTGCGTGGGTGCGGCCACGTGCGACAAGACCGGGCTGACCATGCCGGTCTTCGAATAC
GGCCACGAAGCGGGCGCTTGTGCCATCGTCGGTGGCTATGCGTACCGGGGCAGTGCCAACCCGGTGCTGCATGGGCGGTA
CTTCTATTCCGACCTTTGCACGGGCAAGCTGCTGAGCTTCATGTATCGCGACGGCGTTGTCGCAGAACAGGTCGACTGGA
ACGTCACGATCCCGGGCAGTGTGTTCTCGTTTGGCGTGGATGACGCGCAGGCGCTGTACGTGCTGGCCGATCCGGGCACG
TCGGCGACGAGCGGGCGGGTGTATCGGATCGATGTGTCGGACGGCACGCCTTAA

Upstream 100 bases:

>100_bases
TGACAGCGCCACCGGCACGCTGACGCTCTCCATCTCCGGCCTGCCGTCCGGGACGTCGGCGGCCATCACGGTATTGGGGC
CCGGCCAGTTCCGCCAGACC

Downstream 100 bases:

>100_bases
CGGCGGGGCGCAGGAGCACTGCGCTTCGGGCAGGGGCTCCTGGCCGTTGAACCGCCGCGGACGTGCTGCTATGGCACTTT
CCTGCACGCGCCCTCATTGC

Product: putative glucose/sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTQSTTLSNLAAGSYTVSAASVLAGSTLLKPQPPSQTVAVTAGGSALASVEYGSPETVQLSLTQVAGGLSEPIFLTAPPG
DPRLFVVERAGRIRIVRNGALVATPFLNIAALTTTDGERGLLSMAFDPNYGTNGRFYVYYTDTNGAITIARYNVSAANPD
IAAASGTVLLSIPHGTFSNHNGGQLAFGPDGMLYIGTGDGGGGGDPSGNAQNPATLLGKMLRIDVSGASGYGLPAGNPFV
GQSGSRGEIWALGLRNPWRFTFDAGLLYIADVGEDQREEVDVAPATSAGLNYGWNRTEGTACVGAATCDKTGLTMPVFEY
GHEAGACAIVGGYAYRGSANPVLHGRYFYSDLCTGKLLSFMYRDGVVAEQVDWNVTIPGSVFSFGVDDAQALYVLADPGT
SATSGRVYRIDVSDGTP

Sequences:

>Translated_417_residues
MTQSTTLSNLAAGSYTVSAASVLAGSTLLKPQPPSQTVAVTAGGSALASVEYGSPETVQLSLTQVAGGLSEPIFLTAPPG
DPRLFVVERAGRIRIVRNGALVATPFLNIAALTTTDGERGLLSMAFDPNYGTNGRFYVYYTDTNGAITIARYNVSAANPD
IAAASGTVLLSIPHGTFSNHNGGQLAFGPDGMLYIGTGDGGGGGDPSGNAQNPATLLGKMLRIDVSGASGYGLPAGNPFV
GQSGSRGEIWALGLRNPWRFTFDAGLLYIADVGEDQREEVDVAPATSAGLNYGWNRTEGTACVGAATCDKTGLTMPVFEY
GHEAGACAIVGGYAYRGSANPVLHGRYFYSDLCTGKLLSFMYRDGVVAEQVDWNVTIPGSVFSFGVDDAQALYVLADPGT
SATSGRVYRIDVSDGTP
>Mature_416_residues
TQSTTLSNLAAGSYTVSAASVLAGSTLLKPQPPSQTVAVTAGGSALASVEYGSPETVQLSLTQVAGGLSEPIFLTAPPGD
PRLFVVERAGRIRIVRNGALVATPFLNIAALTTTDGERGLLSMAFDPNYGTNGRFYVYYTDTNGAITIARYNVSAANPDI
AAASGTVLLSIPHGTFSNHNGGQLAFGPDGMLYIGTGDGGGGGDPSGNAQNPATLLGKMLRIDVSGASGYGLPAGNPFVG
QSGSRGEIWALGLRNPWRFTFDAGLLYIADVGEDQREEVDVAPATSAGLNYGWNRTEGTACVGAATCDKTGLTMPVFEYG
HEAGACAIVGGYAYRGSANPVLHGRYFYSDLCTGKLLSFMYRDGVVAEQVDWNVTIPGSVFSFGVDDAQALYVLADPGTS
ATSGRVYRIDVSDGTP

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Homo sapiens, GI187936955, Length=417, Percent_Identity=37.8896882494005, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI187936953, Length=397, Percent_Identity=38.2871536523929, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI124248546, Length=407, Percent_Identity=37.1007371007371, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI20143973, Length=424, Percent_Identity=27.122641509434, Blast_Score=127, Evalue=3e-29,
Organism=Escherichia coli, GI1787060, Length=254, Percent_Identity=26.7716535433071, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 43105; Mature: 42974

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTTLSNLAAGSYTVSAASVLAGSTLLKPQPPSQTVAVTAGGSALASVEYGSPETVQL
CCCCCCCHHHCCCCEEEEHHHHHCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEE
SLTQVAGGLSEPIFLTAPPGDPRLFVVERAGRIRIVRNGALVATPFLNIAALTTTDGERG
EEHHHCCCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCEEEEEEEECCCCCC
LLSMAFDPNYGTNGRFYVYYTDTNGAITIARYNVSAANPDIAAASGTVLLSIPHGTFSNH
EEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEECCCEEEEEECCCCCCCC
NGGQLAFGPDGMLYIGTGDGGGGGDPSGNAQNPATLLGKMLRIDVSGASGYGLPAGNPFV
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCCCCCC
GQSGSRGEIWALGLRNPWRFTFDAGLLYIADVGEDQREEVDVAPATSAGLNYGWNRTEGT
CCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCHHHEEECCCCCCCCCCCCCCCCCCC
ACVGAATCDKTGLTMPVFEYGHEAGACAIVGGYAYRGSANPVLHGRYFYSDLCTGKLLSF
EEEEEEECCCCCCCCHHHHCCCCCCCEEEEECEEECCCCCCEEEEEEHHHHHHHHHHHHH
MYRDGVVAEQVDWNVTIPGSVFSFGVDDAQALYVLADPGTSATSGRVYRIDVSDGTP
HHHCCCEEEECCEEEEECCHHEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
TQSTTLSNLAAGSYTVSAASVLAGSTLLKPQPPSQTVAVTAGGSALASVEYGSPETVQL
CCCCCCHHHCCCCEEEEHHHHHCCCEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEE
SLTQVAGGLSEPIFLTAPPGDPRLFVVERAGRIRIVRNGALVATPFLNIAALTTTDGERG
EEHHHCCCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCEEEEEEEECCCCCC
LLSMAFDPNYGTNGRFYVYYTDTNGAITIARYNVSAANPDIAAASGTVLLSIPHGTFSNH
EEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCEEECCCEEEEEECCCCCCCC
NGGQLAFGPDGMLYIGTGDGGGGGDPSGNAQNPATLLGKMLRIDVSGASGYGLPAGNPFV
CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCHHHHHEEEEEEEECCCCCCCCCCCCCCC
GQSGSRGEIWALGLRNPWRFTFDAGLLYIADVGEDQREEVDVAPATSAGLNYGWNRTEGT
CCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCHHHEEECCCCCCCCCCCCCCCCCCC
ACVGAATCDKTGLTMPVFEYGHEAGACAIVGGYAYRGSANPVLHGRYFYSDLCTGKLLSF
EEEEEEECCCCCCCCHHHHCCCCCCCEEEEECEEECCCCCCEEEEEEHHHHHHHHHHHHH
MYRDGVVAEQVDWNVTIPGSVFSFGVDDAQALYVLADPGTSATSGRVYRIDVSDGTP
HHHCCCEEEECCEEEEECCHHEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]