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The map label for this gene is flgC [H]

Identifier: 116694217

GI number: 116694217

Start: 297995

End: 298402

Strand: Direct

Name: flgC [H]

Synonym: H16_B0262

Alternate gene names: 116694217

Gene position: 297995-298402 (Clockwise)

Preceding gene: 116694216

Following gene: 116694218

Centisome position: 10.23

GC content: 65.69

Gene sequence:

>408_bases
ATGCCGGCAATGAACATCTTCGACGTCGCGGGCTCGGCCATGGCCGCGCAGTCGCAGCGCATGAACGTGACCGCTTCCAA
CCTGGCCAACGCCGACAGCGTGGTCAGCCCCGACGGCCAGGCCTATCGCGCCAAGCAGGTCGTGTTCGGCATGGCGCCCA
CGCCGGGGCAGACGGACATCGGCGGCGTGCAGGTGCGAGGCGTGTCGGAAGACCCGTCGCCGCCGCGCATGGTGCACAAC
CCCACGCACCCCATGGCCAATGCCCAGGGCTACGTGGTGATGCCCAACGTCAACCCGGTGGAGGAGATGGTCAACATGAT
CTCGGCCTCGCGCTCCTACCAGGCCAACGTGGAAGTGCTCAATACCGCCAAGAACATGATGCTCAAGACGCTGACGATCG
GCCAGTGA

Upstream 100 bases:

>100_bases
CGCCGTGCACTTCGAGTCCGGCCTGACGGTGATGAATTCAAAGATCAAGACCATGCTGGCCGCCATCCAGCAATAGATCG
AGCAGTAAGGGAGAGAGCGC

Downstream 100 bases:

>100_bases
CAAGCCTCGGCCTGTATCGGCAACGCCTCCACCAGCACGCACACAACGAACCGACATGACAACCACCTCCGCGGTAGGCA
GCAACACCCAGGGCATCAAC

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVRGVSEDPSPPRMVHN
PTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ

Sequences:

>Translated_135_residues
MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVRGVSEDPSPPRMVHN
PTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ
>Mature_134_residues
PAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDIGGVQVRGVSEDPSPPRMVHNP
THPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=135, Percent_Identity=65.9259259259259, Blast_Score=176, Evalue=6e-46,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14319; Mature: 14187

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDI
CCCCCCHHHCCCHHHHHCCCCCEEHHHCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCC
GGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVL
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH
NTAKNMMLKTLTIGQ
HHHHHHHHHEEECCC
>Mature Secondary Structure 
PAMNIFDVAGSAMAAQSQRMNVTASNLANADSVVSPDGQAYRAKQVVFGMAPTPGQTDI
CCCCCHHHCCCHHHHHCCCCCEEHHHCCCCCCEECCCCCCEEEEEEEEECCCCCCCCCC
GGVQVRGVSEDPSPPRMVHNPTHPMANAQGYVVMPNVNPVEEMVNMISASRSYQANVEVL
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH
NTAKNMMLKTLTIGQ
HHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA