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The map label for this gene is flhD1

Identifier: 116694190

GI number: 116694190

Start: 264211

End: 264528

Strand: Direct

Name: flhD1

Synonym: H16_B0235

Alternate gene names: 116694190

Gene position: 264211-264528 (Clockwise)

Preceding gene: 116694189

Following gene: 116694191

Centisome position: 9.07

GC content: 57.86

Gene sequence:

>318_bases
TTGGAAAGCAGTGAAGTTCTCCAGGAGATCAGGGAGGTTAACCTCGCCTATCTGCTGCTCGCGCAACGCCTGGTGCGCGA
AAACCAGGTCGAAGCCATGTTCCGGCTCGGGGTCAGCAAGGAAATTGCGGATATTCTTGCCAAGCTGACTTCCGCGCAAC
TCGTCAAGCTGGCGGCATCCAACATGGTGCTGTGCAGGTTCCGCTTCGACGACCATGCGCTTCTGTCCACTCTCACCCAC
ACGGCCAAGAGTCATGACATGCAGCAGATCCACGCCGCGATCCTGCTTGCACGCCAGCCTGTGGAGTCGCTCAATTGA

Upstream 100 bases:

>100_bases
CCCGCCCAGCCGCATACAAACGATCTGGTCGCCGGGCCCGCAAGGGCATCGGTAAGCGCCGGACAAGCGGCCACGGTGGG
TTTTTGGTAGCGGGGATAAA

Downstream 100 bases:

>100_bases
CCGCGCTCCTGCAGGCCGAGCCCACCCGGAGTTACACGGCCACCTCCGTTCCCAGCCGCAAGAGCGTGCTCCAGGATGCG
AACCAGACCCAGCTTGCGAT

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIADILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN

Sequences:

>Translated_105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIADILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN
>Mature_105_residues
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIADILAKLTSAQLVKLAASNMVLCRFRFDDHALLSTLTH
TAKSHDMQQIHAAILLARQPVESLN

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family

Homologues:

Organism=Escherichia coli, GI145693151, Length=111, Percent_Identity=46.8468468468468, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLHD_CUPNH (Q0K4N8)

Other databases:

- EMBL:   AM260480
- RefSeq:   YP_728401.1
- ProteinModelPortal:   Q0K4N8
- SMR:   Q0K4N8
- STRING:   Q0K4N8
- GeneID:   4456838
- GenomeReviews:   AM260480_GR
- KEGG:   reh:H16_B0235
- eggNOG:   NOG07455
- HOGENOM:   HBG367151
- OMA:   MGTSELL
- PhylomeDB:   Q0K4N8
- ProtClustDB:   PRK02909
- BioCyc:   REUT381666:H16_B0235-MONOMER
- GO:   GO:0005737
- GO:   GO:0006350
- HAMAP:   MF_00725
- InterPro:   IPR007911
- ProDom:   PD015582

Pfam domain/function: PF05247 FlhD; SSF63592 Flagellar_transcriptional_act

EC number: NA

Molecular weight: Translated: 11827; Mature: 11827

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIADILAKLTSAQLVKLAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NMVLCRFRFDDHALLSTLTHTAKSHDMQQIHAAILLARQPVESLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MESSEVLQEIREVNLAYLLLAQRLVRENQVEAMFRLGVSKEIADILAKLTSAQLVKLAAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NMVLCRFRFDDHALLSTLTHTAKSHDMQQIHAAILLARQPVESLN
CEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA