Click here to switch to the map view.

The map label for this gene is tadC3

Identifier: 116694144

GI number: 116694144

Start: 213686

End: 214723

Strand: Direct

Name: tadC3

Synonym: H16_B0189

Alternate gene names: NA

Gene position: 213686-214723 (Clockwise)

Preceding gene: 116694143

Following gene: 116694145

Centisome position: 7.34

GC content: 71.1

Gene sequence:

>1038_bases
ATGGACCGCCTGACACTGATTTCGCTCAGCCTGCTAGCCGCCGCCTGCGGCGTGGGCGTACTGACGCTGCCGCTGTTGCG
CGACTGGCGCCAGCGCCGGCTGTCGGCGCGCACCATCGACGGCGCGCTGGCGCGGCAGCGCGCGGCAGAAGCCGCCCAGG
CCGCCCACGCCGCAGTCCCCGCCGCGTCGGGCACCCAGGCTGCGGCAAAGGCCGGTGCCGCCGCGCCGCAGGGCAGGGGC
GGGGCGGCTACCGCAATCGGGGCACAACTGGGCGCGCGCGTGGGCGAGCGCATCAATGCCCACTGGCTGGATTCGCGCCT
CGGGCGCGCGGTGGTGACGCCGGAAGACCAGCAGTTGCTGGAGCAATGTGGATGGTACGGGCCGCAGTCGCGCATGCTGT
TTGGCGTGCTGCGGCTGGGGTTGCCGTCGGCCCTGGCGCTCGCCGCCATGCTCTGGCACGTGGGCGCGGGCGCCTTTGCC
ATCGTCGCGTGGGGCTTCGGCACGTTTGCGCTGGCCTACCTGGCCCCCAAGTGGCACCTGCGCCGCCGTGCCGCGGCGCG
CCTGCGCATGGTCGATGACGAGCTGCCGGTGCTGATCGACATGCTGCGCCTGCTGCAGGGCGTGGGCCTGTCGATCGACC
AGAGCCTGCAGGTGATCGTGGCCGAGTTCGGCAGCATGCTGCGCGTGCTGGGGCCGGAGCTGGCACGCGCCAACCAGCAG
TTTGCCTCGGGACGCTCGCGCGAACAGACGCTCTTGCGCATCGGCCGGCTGTTCGACAGTGAAGACCTGAAGAGCCTGAT
CACGCTGCTGACGCAGGTGGACAAGCACGGCGGCGCGGTGCAGGAGCCGCTGCGCCAGTTCGGCCTGCGCATGCAGGAGG
CGCGCAAATCGCGCTTGAAGGATGAGATCGGCCGGCTCACGGTCAAGATGACCGCGGTGATGGTGGTGAGCCTGCTGCCG
GTGCTGCTGATCCTGACCGCGGGCCCCGGCTTCCTCGGGGTGATCCGCATGCTGGCACATATGGGAGGGACGCGATGA

Upstream 100 bases:

>100_bases
CTGCTGTCGGCCCTGGCGCTGGAAATTGCCGGGGCCTTCATGCTGTACCGGCTGGCCAAGTCGATCTGAGCGGCATGCCA
GCACGCAGACAAGAGCCAAC

Downstream 100 bases:

>100_bases
CGCGCTCAGTCGGTCCGGCGCTGGGCCGGATCTCGAAAACGGCGGCGTGCCTGCTGCTCGCGGCGCTGTCTGGCTGCGCC
GCCAATCAGAACGGGGCCGC

Product: flp pilus assembly protein TadC

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein F Subunit; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Transmembrane Type II Secretion Protein; Tight Adherence TadC Related Transmembrane Protein; Type II/IV Secretion System Membrane Protein; Type II Secretion System Protein Transmembrane; Flp Pilus Assembly Protein

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MDRLTLISLSLLAAACGVGVLTLPLLRDWRQRRLSARTIDGALARQRAAEAAQAAHAAVPAASGTQAAAKAGAAAPQGRG
GAATAIGAQLGARVGERINAHWLDSRLGRAVVTPEDQQLLEQCGWYGPQSRMLFGVLRLGLPSALALAAMLWHVGAGAFA
IVAWGFGTFALAYLAPKWHLRRRAAARLRMVDDELPVLIDMLRLLQGVGLSIDQSLQVIVAEFGSMLRVLGPELARANQQ
FASGRSREQTLLRIGRLFDSEDLKSLITLLTQVDKHGGAVQEPLRQFGLRMQEARKSRLKDEIGRLTVKMTAVMVVSLLP
VLLILTAGPGFLGVIRMLAHMGGTR

Sequences:

>Translated_345_residues
MDRLTLISLSLLAAACGVGVLTLPLLRDWRQRRLSARTIDGALARQRAAEAAQAAHAAVPAASGTQAAAKAGAAAPQGRG
GAATAIGAQLGARVGERINAHWLDSRLGRAVVTPEDQQLLEQCGWYGPQSRMLFGVLRLGLPSALALAAMLWHVGAGAFA
IVAWGFGTFALAYLAPKWHLRRRAAARLRMVDDELPVLIDMLRLLQGVGLSIDQSLQVIVAEFGSMLRVLGPELARANQQ
FASGRSREQTLLRIGRLFDSEDLKSLITLLTQVDKHGGAVQEPLRQFGLRMQEARKSRLKDEIGRLTVKMTAVMVVSLLP
VLLILTAGPGFLGVIRMLAHMGGTR
>Mature_345_residues
MDRLTLISLSLLAAACGVGVLTLPLLRDWRQRRLSARTIDGALARQRAAEAAQAAHAAVPAASGTQAAAKAGAAAPQGRG
GAATAIGAQLGARVGERINAHWLDSRLGRAVVTPEDQQLLEQCGWYGPQSRMLFGVLRLGLPSALALAAMLWHVGAGAFA
IVAWGFGTFALAYLAPKWHLRRRAAARLRMVDDELPVLIDMLRLLQGVGLSIDQSLQVIVAEFGSMLRVLGPELARANQQ
FASGRSREQTLLRIGRLFDSEDLKSLITLLTQVDKHGGAVQEPLRQFGLRMQEARKSRLKDEIGRLTVKMTAVMVVSLLP
VLLILTAGPGFLGVIRMLAHMGGTR

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37016; Mature: 37016

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLTLISLSLLAAACGVGVLTLPLLRDWRQRRLSARTIDGALARQRAAEAAQAAHAAVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AASGTQAAAKAGAAAPQGRGGAATAIGAQLGARVGERINAHWLDSRLGRAVVTPEDQQLL
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHH
EQCGWYGPQSRMLFGVLRLGLPSALALAAMLWHVGAGAFAIVAWGFGTFALAYLAPKWHL
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RRRAAARLRMVDDELPVLIDMLRLLQGVGLSIDQSLQVIVAEFGSMLRVLGPELARANQQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FASGRSREQTLLRIGRLFDSEDLKSLITLLTQVDKHGGAVQEPLRQFGLRMQEARKSRLK
HHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DEIGRLTVKMTAVMVVSLLPVLLILTAGPGFLGVIRMLAHMGGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDRLTLISLSLLAAACGVGVLTLPLLRDWRQRRLSARTIDGALARQRAAEAAQAAHAAVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AASGTQAAAKAGAAAPQGRGGAATAIGAQLGARVGERINAHWLDSRLGRAVVTPEDQQLL
CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHH
EQCGWYGPQSRMLFGVLRLGLPSALALAAMLWHVGAGAFAIVAWGFGTFALAYLAPKWHL
HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RRRAAARLRMVDDELPVLIDMLRLLQGVGLSIDQSLQVIVAEFGSMLRVLGPELARANQQ
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
FASGRSREQTLLRIGRLFDSEDLKSLITLLTQVDKHGGAVQEPLRQFGLRMQEARKSRLK
HHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DEIGRLTVKMTAVMVVSLLPVLLILTAGPGFLGVIRMLAHMGGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA