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The map label for this gene is yfbE [C]

Identifier: 116693999

GI number: 116693999

Start: 48738

End: 49991

Strand: Direct

Name: yfbE [C]

Synonym: H16_B0039

Alternate gene names: 116693999

Gene position: 48738-49991 (Clockwise)

Preceding gene: 116693996

Following gene: 116694000

Centisome position: 1.67

GC content: 64.11

Gene sequence:

>1254_bases
ATGCTGGATACCAGTTTTTCTCCCTGGCCAAGTTTCACTGCCGACGAGGCGGCTGCCGTGCAGAAGGTGCTGCTGTCGAA
CCGGGTGAACTACTGGACCGGCTCTGAATGCCGGAAGTTCGAGGAGGAATTCGCCAGGTGGGCCGGGACGCCCTATGCGA
TCGCGCTGGCAAACGGGACACTTGCGCTCGATGTCGCGCTGAAGGCGCTGGACATTGGCCTTGGCGACGAGGTCGTGGTG
ACGCCGCGAACATTCATCGCCAGCATTTCAAGCGTGGTGAATGCGGGAGCAAAGCCGGTATTTGCAGACGTCGATCTTGC
GAGCGGCAATCTTTCCGCGGTGACGATCAGCAAGGTTCTGACGCCAAGGACGCGAGCCGTCATATGCGTGCACCTTGCCG
GCATACCCTGCGACATGGACCCGATCATGGCGCTGGCGCGCGAGCACGGCATCAAGGTGATCGAGGATTGTGCCCAGGCA
CATGGTGCGCGCTACAAAGGGCGTTCGGTCGGCTCGATCGGGGACGTGGGTGCATGGTCCTTCTGCCAGGACAAGATTAT
GACCACCGGCGGCGAGGGCGGCATGGTGACGACCAGCGCGAGGGACCTCTGGCTGCGCATGTGGTCGTACAAGGACCATG
GCAAGAGCTGGGACGCTGTCTATGAGCGTCAGCACCCCCCGGGATTCCGGTGGTTGCACGAATCCTTCGGGACGAACTGG
CGCATGATAGAAATGCAGGCGGTGATCGGGCGCATCCAGCTTGCGCGCATGAAGCAATGGACAGCGCAGCGCACTGCCAA
TGCGGAGGTCATTGCCGGCGCGCTTCGGCAATGTGCTGCGGTCTGGTTGCCCGCCTGCCCACCGGATGCACAATCAGCCT
GGTACAAGTTCTATGCATTCGTCCGCCCGGAATGGCTGAGGGATGGCTGGAGCCGTGACCGCATCGTGGCCGAGATCCAG
GCAGGCGGCGTGCCCTGCTATGCGGGCGGCTGCTCGGAGGCTTATCTCGAGAAGGCGTTCGATTACACGGGCTGGCGCCC
GCCGCACCGGTTGCCCAACGCCAGGCTGCTGGGTGAAAACAGCCTGATGCTGCTGGTGCATCCCACCCTGACCGACGCCG
AGATTGCCCTGACTGCGCAGGTGCTGCGCGAGGTCATGCTTCGTGCAACGCTGCCGACCGGTGCCGGGCGGGACGCCGAC
GGCGGGGTGGTGCCCGGCCTGGCGCAGGACTGCGCGGGCGCCATGCGGCGATGA

Upstream 100 bases:

>100_bases
CACCTGCCCATGCAAGTCTGGTTAGATGGATGCGTTCCCGGTACCCGGTCGGGTTCGTGCAGGGCACCCGCTCCGACTTT
CATTACTGAGGTGGACCACC

Downstream 100 bases:

>100_bases
TGCACTGGCCGTCGCTGATCCAGCTTGGCACCATTACCTTGCTGGTGCCCGTTGCGCTGGTCATTGCGCTAGCGCTGTCC
GTGGGGGGCGCATGGCGCAG

Product: EPS aminotransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLDTSFSPWPSFTADEAAAVQKVLLSNRVNYWTGSECRKFEEEFARWAGTPYAIALANGTLALDVALKALDIGLGDEVVV
TPRTFIASISSVVNAGAKPVFADVDLASGNLSAVTISKVLTPRTRAVICVHLAGIPCDMDPIMALAREHGIKVIEDCAQA
HGARYKGRSVGSIGDVGAWSFCQDKIMTTGGEGGMVTTSARDLWLRMWSYKDHGKSWDAVYERQHPPGFRWLHESFGTNW
RMIEMQAVIGRIQLARMKQWTAQRTANAEVIAGALRQCAAVWLPACPPDAQSAWYKFYAFVRPEWLRDGWSRDRIVAEIQ
AGGVPCYAGGCSEAYLEKAFDYTGWRPPHRLPNARLLGENSLMLLVHPTLTDAEIALTAQVLREVMLRATLPTGAGRDAD
GGVVPGLAQDCAGAMRR

Sequences:

>Translated_417_residues
MLDTSFSPWPSFTADEAAAVQKVLLSNRVNYWTGSECRKFEEEFARWAGTPYAIALANGTLALDVALKALDIGLGDEVVV
TPRTFIASISSVVNAGAKPVFADVDLASGNLSAVTISKVLTPRTRAVICVHLAGIPCDMDPIMALAREHGIKVIEDCAQA
HGARYKGRSVGSIGDVGAWSFCQDKIMTTGGEGGMVTTSARDLWLRMWSYKDHGKSWDAVYERQHPPGFRWLHESFGTNW
RMIEMQAVIGRIQLARMKQWTAQRTANAEVIAGALRQCAAVWLPACPPDAQSAWYKFYAFVRPEWLRDGWSRDRIVAEIQ
AGGVPCYAGGCSEAYLEKAFDYTGWRPPHRLPNARLLGENSLMLLVHPTLTDAEIALTAQVLREVMLRATLPTGAGRDAD
GGVVPGLAQDCAGAMRR
>Mature_417_residues
MLDTSFSPWPSFTADEAAAVQKVLLSNRVNYWTGSECRKFEEEFARWAGTPYAIALANGTLALDVALKALDIGLGDEVVV
TPRTFIASISSVVNAGAKPVFADVDLASGNLSAVTISKVLTPRTRAVICVHLAGIPCDMDPIMALAREHGIKVIEDCAQA
HGARYKGRSVGSIGDVGAWSFCQDKIMTTGGEGGMVTTSARDLWLRMWSYKDHGKSWDAVYERQHPPGFRWLHESFGTNW
RMIEMQAVIGRIQLARMKQWTAQRTANAEVIAGALRQCAAVWLPACPPDAQSAWYKFYAFVRPEWLRDGWSRDRIVAEIQ
AGGVPCYAGGCSEAYLEKAFDYTGWRPPHRLPNARLLGENSLMLLVHPTLTDAEIALTAQVLREVMLRATLPTGAGRDAD
GGVVPGLAQDCAGAMRR

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=31.701030927835, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI2367285, Length=272, Percent_Identity=31.25, Blast_Score=134, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 45572; Mature: 45572

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDTSFSPWPSFTADEAAAVQKVLLSNRVNYWTGSECRKFEEEFARWAGTPYAIALANGT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
LALDVALKALDIGLGDEVVVTPRTFIASISSVVNAGAKPVFADVDLASGNLSAVTISKVL
EEEEEHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHH
TPRTRAVICVHLAGIPCDMDPIMALAREHGIKVIEDCAQAHGARYKGRSVGSIGDVGAWS
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTTSARDLWLRMWSYKDHGKSWDAVYERQHPPGFRWLHESFGTNW
HHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCE
RMIEMQAVIGRIQLARMKQWTAQRTANAEVIAGALRQCAAVWLPACPPDAQSAWYKFYAF
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VRPEWLRDGWSRDRIVAEIQAGGVPCYAGGCSEAYLEKAFDYTGWRPPHRLPNARLLGEN
CCCHHHHCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC
SLMLLVHPTLTDAEIALTAQVLREVMLRATLPTGAGRDADGGVVPGLAQDCAGAMRR
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLDTSFSPWPSFTADEAAAVQKVLLSNRVNYWTGSECRKFEEEFARWAGTPYAIALANGT
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
LALDVALKALDIGLGDEVVVTPRTFIASISSVVNAGAKPVFADVDLASGNLSAVTISKVL
EEEEEHHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEHHHHH
TPRTRAVICVHLAGIPCDMDPIMALAREHGIKVIEDCAQAHGARYKGRSVGSIGDVGAWS
CCCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
FCQDKIMTTGGEGGMVTTSARDLWLRMWSYKDHGKSWDAVYERQHPPGFRWLHESFGTNW
HHHHHHHCCCCCCCEEEECHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCE
RMIEMQAVIGRIQLARMKQWTAQRTANAEVIAGALRQCAAVWLPACPPDAQSAWYKFYAF
EEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VRPEWLRDGWSRDRIVAEIQAGGVPCYAGGCSEAYLEKAFDYTGWRPPHRLPNARLLGEN
CCCHHHHCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCC
SLMLLVHPTLTDAEIALTAQVLREVMLRATLPTGAGRDADGGVVPGLAQDCAGAMRR
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]