| Definition | Ralstonia eutropha H16 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008314 |
| Length | 2,912,490 |
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The map label for this gene is 116693986
Identifier: 116693986
GI number: 116693986
Start: 30504
End: 31847
Strand: Direct
Name: 116693986
Synonym: H16_B0026
Alternate gene names: NA
Gene position: 30504-31847 (Clockwise)
Preceding gene: 116693980
Following gene: 116693995
Centisome position: 1.05
GC content: 62.57
Gene sequence:
>1344_bases ATGACCCCGGAAGCCCTTTCCTGGCTACAGCGGATTCTGGCCGAGCGATTCGGCCATGGCTTTCACCTGCAAGCTGCTGG CGCGGACTTTGTCCACCTGTGCCTTGCTGGTTCCGGCCAGAGGTCGATTGAGATTGCCGCAGATCCCGGCACCTTCCGGC GCGCCGACTCTGAGCTCGCCTTCACGAGCTGGGACGCGCTTGCCGAGGGTTGGCAGCCGGCCCTCGGCAGTCCCTTGCCA GCGCCAGGCCTCGCGCGCGCACCGTCACCGCTGATCGAGGCGACCACTACCGGCTATCGCATCCACTATGACGTTCTCGG TCTAAGCTACTGGATGCTGTCGCGCCAGGAGGAGGTCGGCCGCTCCGACCTCGACAGCTACGGTCGTTTCCCGGCCAGCG CGTCGCATGCCGGGAAACATGGCTATCTGGAGCGGCCGGTGGTGGACGAATGGCTGCATATCCTTGGCCAGGTGATCAGC CGGCTATGGCCCGAACTGCAGCTCAGGCAGCAGCGGGCCAGCATGAAGGTGTCGCATGACGTGGATGTGCCCAGCCGCTA TGGCTTTGCCTCTGCGGCGAGAATCATCCGCCGCATGGCGGGCGACATACTGATACGCCGGGACGTGAAAAGCGTGCTGC AGGCTCCCGTGATACGGCTTAAGACCCGGACCGCGCTGCATCCGACGGATCGGGTCAATACCTTCGACTGGATCATGGAT GTTTCCGAGCGCCATGGACTGGTCAGCGCTTTCTACTTCATCTGTGGCTGTACCGACCCCAGCAAGGATGCCGACTACGA GCCCGAGCATCCCGCCATATGTGGACTGATGCAGCGCATCCATGCCCGCGGCCACGAAATCGGCCTGCATCCGAGCTTCA ATACCTATCGCGCCCCCGAAAAGCTCCAGGCGGAAGCAAAGCGGCTGCGGCGGATATGCGAGCAGGAGAATATCGAACAG GAAGCATGGGGCGGCCGCATGCATTACCTGCGCTGGGAACACCCCACCACCATGCTTGGTTGGGAGCAGGCAGGCATGAC CTACGACAGCACGCTCACCTACGCCGACCACGCCGGATTCCGCTGCGGAACCTGCTTCGAGTATCCGGCCTTCGACCCGG TCGCGGGAACGGCGCTGAACCTGCGCATCCGTCCGCTGATTGCGATGGAAGGCAGCGTCATTGGTTATATGGGGCTTGGA ACCGGCGAAGCAGCCTGGAAGAAGTTCCGGGAACTGAAGGATACCTGCAAGGCGGTGAACGGCTGTTTCACGATGCTCTG GCATAACTCATCGCTCGGCAGTGCCGAAGAACGGGATCTGTACCAGGCGGTGCTTGAGCACTGA
Upstream 100 bases:
>100_bases CGGCTTGCGTGGCGCCGATCCAGGACCGGCTCGTGGAACTGACAGCCATCATTCCCATCGGAGCATTGGCATATTCACAC TGGAAATCTGAATGAGGCAT
Downstream 100 bases:
>100_bases CCAGCCATCGCATTGGCAAGCAGCCGGTCCGCACCCGCCAGGGCCGCCCTCGCCCGCAGGCGAACAGCGCCGCGATGCTT TTGTCCTTCAGCGCGAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTPEALSWLQRILAERFGHGFHLQAAGADFVHLCLAGSGQRSIEIAADPGTFRRADSELAFTSWDALAEGWQPALGSPLP APGLARAPSPLIEATTTGYRIHYDVLGLSYWMLSRQEEVGRSDLDSYGRFPASASHAGKHGYLERPVVDEWLHILGQVIS RLWPELQLRQQRASMKVSHDVDVPSRYGFASAARIIRRMAGDILIRRDVKSVLQAPVIRLKTRTALHPTDRVNTFDWIMD VSERHGLVSAFYFICGCTDPSKDADYEPEHPAICGLMQRIHARGHEIGLHPSFNTYRAPEKLQAEAKRLRRICEQENIEQ EAWGGRMHYLRWEHPTTMLGWEQAGMTYDSTLTYADHAGFRCGTCFEYPAFDPVAGTALNLRIRPLIAMEGSVIGYMGLG TGEAAWKKFRELKDTCKAVNGCFTMLWHNSSLGSAEERDLYQAVLEH
Sequences:
>Translated_447_residues MTPEALSWLQRILAERFGHGFHLQAAGADFVHLCLAGSGQRSIEIAADPGTFRRADSELAFTSWDALAEGWQPALGSPLP APGLARAPSPLIEATTTGYRIHYDVLGLSYWMLSRQEEVGRSDLDSYGRFPASASHAGKHGYLERPVVDEWLHILGQVIS RLWPELQLRQQRASMKVSHDVDVPSRYGFASAARIIRRMAGDILIRRDVKSVLQAPVIRLKTRTALHPTDRVNTFDWIMD VSERHGLVSAFYFICGCTDPSKDADYEPEHPAICGLMQRIHARGHEIGLHPSFNTYRAPEKLQAEAKRLRRICEQENIEQ EAWGGRMHYLRWEHPTTMLGWEQAGMTYDSTLTYADHAGFRCGTCFEYPAFDPVAGTALNLRIRPLIAMEGSVIGYMGLG TGEAAWKKFRELKDTCKAVNGCFTMLWHNSSLGSAEERDLYQAVLEH >Mature_446_residues TPEALSWLQRILAERFGHGFHLQAAGADFVHLCLAGSGQRSIEIAADPGTFRRADSELAFTSWDALAEGWQPALGSPLPA PGLARAPSPLIEATTTGYRIHYDVLGLSYWMLSRQEEVGRSDLDSYGRFPASASHAGKHGYLERPVVDEWLHILGQVISR LWPELQLRQQRASMKVSHDVDVPSRYGFASAARIIRRMAGDILIRRDVKSVLQAPVIRLKTRTALHPTDRVNTFDWIMDV SERHGLVSAFYFICGCTDPSKDADYEPEHPAICGLMQRIHARGHEIGLHPSFNTYRAPEKLQAEAKRLRRICEQENIEQE AWGGRMHYLRWEHPTTMLGWEQAGMTYDSTLTYADHAGFRCGTCFEYPAFDPVAGTALNLRIRPLIAMEGSVIGYMGLGT GEAAWKKFRELKDTCKAVNGCFTMLWHNSSLGSAEERDLYQAVLEH
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50195; Mature: 50063
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEALSWLQRILAERFGHGFHLQAAGADFVHLCLAGSGQRSIEIAADPGTFRRADSELA CCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCE FTSWDALAEGWQPALGSPLPAPGLARAPSPLIEATTTGYRIHYDVLGLSYWMLSRQEEVG EHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHC RSDLDSYGRFPASASHAGKHGYLERPVVDEWLHILGQVISRLWPELQLRQQRASMKVSHD HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC VDVPSRYGFASAARIIRRMAGDILIRRDVKSVLQAPVIRLKTRTALHPTDRVNTFDWIMD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VSERHGLVSAFYFICGCTDPSKDADYEPEHPAICGLMQRIHARGHEIGLHPSFNTYRAPE HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCH KLQAEAKRLRRICEQENIEQEAWGGRMHYLRWEHPTTMLGWEQAGMTYDSTLTYADHAGF HHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCEECHHHCCCCCCCEEEECCCCCC RCGTCFEYPAFDPVAGTALNLRIRPLIAMEGSVIGYMGLGTGEAAWKKFRELKDTCKAVN CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHH GCFTMLWHNSSLGSAEERDLYQAVLEH HHHHEEEECCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TPEALSWLQRILAERFGHGFHLQAAGADFVHLCLAGSGQRSIEIAADPGTFRRADSELA CHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHCCCCCCE FTSWDALAEGWQPALGSPLPAPGLARAPSPLIEATTTGYRIHYDVLGLSYWMLSRQEEVG EHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHHC RSDLDSYGRFPASASHAGKHGYLERPVVDEWLHILGQVISRLWPELQLRQQRASMKVSHD HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC VDVPSRYGFASAARIIRRMAGDILIRRDVKSVLQAPVIRLKTRTALHPTDRVNTFDWIMD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH VSERHGLVSAFYFICGCTDPSKDADYEPEHPAICGLMQRIHARGHEIGLHPSFNTYRAPE HHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCH KLQAEAKRLRRICEQENIEQEAWGGRMHYLRWEHPTTMLGWEQAGMTYDSTLTYADHAGF HHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEECCCCCEECHHHCCCCCCCEEEECCCCCC RCGTCFEYPAFDPVAGTALNLRIRPLIAMEGSVIGYMGLGTGEAAWKKFRELKDTCKAVN CCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHH GCFTMLWHNSSLGSAEERDLYQAVLEH HHHHEEEECCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA