Definition Ralstonia eutropha H16 chromosome 2, complete sequence.
Accession NC_008314
Length 2,912,490

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The map label for this gene is 116693976

Identifier: 116693976

GI number: 116693976

Start: 17145

End: 19712

Strand: Direct

Name: 116693976

Synonym: H16_B0016

Alternate gene names: NA

Gene position: 17145-19712 (Clockwise)

Preceding gene: 116693975

Following gene: 116693978

Centisome position: 0.59

GC content: 64.95

Gene sequence:

>2568_bases
ATGAAGTCGCAAACTTATCCTGACACAAGCATTCTTGCGTCCGGTCAGCAAGCACTCCCCGGCGGCCGCCCGGGCGTTGC
CATCGGCAGTACCGCGCTCGGCGGCGAGTGGACATGGGTGCAGACACCCGCCGGCGCGGCCGAAAGCCCCGCTGCATTGG
ATCCTGCCGCAGGCTGGCTGCCGGCCCCAGTGCCCGGCACGGTGGCCAGCGCGCTGCGCGCCGCCGGGCGATGGGACGAC
GCAATGCCGCCGCCATTGCACCAGTATGACCATTGGTATCGTGTGAACTTTGCCGGCCGCGGCCGGCGCGTGCTGCGCTT
TAACGGGCTCGCCACGGTGGTCGAAGCCTGGCTGAACGGAAAGCTTGTGCTGAGCGCGCGGCATATGTTTGTCGCTCATG
AAGTCGAGGTCGACCTGGACGGCGACAACCTGATGCACCTCTGCTTCCGTGCGCTCCATCCGTGGTTGCGCAAGCAGCGC
GGCCCGGTGCGGTGGAAGCCAAGAATGATCGTGCCACCAATCCTGCGGGCGATTCGCACGACCCTGCTTGGCCACATGCC
GGGCTGGTGCCCGCCGGTCCATGCGGTTGGGCCCTGGCGGCCGGTGGAACTGCTTGACCCGGCCAGTGACGACATCCTGC
ATGGCGTGCGCGCTGATCTGTGGGGGCGGGTGCAAGGAGATCGCGGTGTGATTGGCCTGCACCTGCACTTCCCGGCATCC
GCGCCAGCGTCTGGATCGTTCGAGGCCATCGACGGCGAGGGATGCATCTATCCGGGCTCGCTGTCGCGTACCGACAGGTT
CACACTCGAAGGCACAGTCTGCGTTGAACGTCCAAAGCTCTGGTGGCCGCATACGCACGGTGAACCCCACCTCTACCGTG
TGGATGCAACCATCGAGGGACGCGCCATCCACTGCGGACGGGTTGGCTTTCGCACCATATCATTGGATTGTTCAAGCGAT
GCCGGGGCCTTCGCACTGCGCATCAACGGAGAGCCGCTGTTCTGCCGGGGGGCGTGCATCTCCAGCAATGATCTGCACGG
CCTTGCCGACACGGATGAAGCATCCCGGCACTGGCTGGAGCTGGCGCGCCGGGGCGGGATGAACATGGTGCGGATCAGCG
GCGTCACGTGCTATCCGGGCGCGGCCTTCTACCGGATATGTGACGAACTTGGCTTGCTGGTCTGGCACGATTTCATGTTC
GCCAATTTTGATTATGGCAGCATCGGACCGGGCCTCGGCCTCACCGAGGACATCACGCGCGAAGTTGGCGACTGGCTAAG
CGCCACCCTAACCCATCCGAGCATTGCCGTGCTGTGTGGCGGCAGCGAGGCAGAGCAGCAGGCGGCAATGATGGGCGTCT
CGCGCAGCGACTGGAAGCAGCCACTGTTCGACGAACTGATCCGGGGCTTGGTTGCCGCCAAGCGGCCGGACGTAGTGTAT
GTCGGCAATTCGCCAACTGGCGGCGCGTGGCCGTTCCAGCCGGACACTGGTGTGAGTCATTACTACGGCGTTGGAGCCTA
CCAGCGACCGTTGGCGGATGCGCGCTTGGCGCAAGTGCGCTTTGCTTCCGAATGTCTGGCATTTGCCAATGTGCCCTGCG
AGCGCACGCTGGCGGAACACGGTTTGTCGCAGCCGCTGCATTCGCCCCGCTGGAAAGCCACAATACCCCGCGACGCGGGC
GCACCGTGGGATTTCGAGGATGTACGTGAGTACTACCTGCGAACCTTGTACGAAGTGGATCCACCGCGCCTACGATATGA
GCAGCCGCAGCGTTACCTGGTGCTGTCCCGTGCGGTGGTCGCGGAGGTGATGACAGAAGTCTTCAGCGAATGGCGCCGGG
TCGGGTCAAGCTGTGCCGGCGGACTGATCTGGCAATTGCAGGATCTCGTGCCCGGAGCCGGCTGGGGCATCGTCGATGCG
TGCGGGCGGCCAAAGTCGGCCTGGCATGCCCTGCGGCAGGTCTGGCAACCGCTGCAGGTATTGATTACCGATGAAGGGCT
CAACGGACTGCACGTGCATGCGATCAACGAAACGCCGCAACCGCACGCGCTGTCGCTGACGCTGCGCTGCCTGCGCGACG
GCGAGACAGTTGTGGCCGAAGCCCGGCACAGCCTGTTATTGCCGGCGCGTGGCGCGGCGCGCATTGAAGCAGCGGCGCTG
CTGGACCGCTTCTTCGACTTCACCTATGCGTATCGCTTCGGCCCGCCGACGCACGATGTGGTCGTGGTCACGCTGCATGC
TGCCGACAGCGGCGAGCCGCTGAGCCAGGCCGTCTACCTTCCTGACCGCCGTGCCGCCGCGCTGAAGCCCCCCGGGTTGC
GAGCCAGGCTCGAGCAAGTCGACGGTGACTGGTGGCTGACGGTATCCGCGCAGCGCTTCGCACGTTGGGTTCACATCGAC
GATCATGCCTTTCAAGCGACCGATAACTGGTTCCATCTCGCGCCCGGCAGCAGCCGGCGTCTGCGGTTGGTGCATGAGGC
GGGGAAGGCTGGCGCGCACGCTCCCGCGATTCCTTCCGGCGAGATCCACGCGGTCAATGCGGAGCATCCACTTGGCTATG
ATGGCTGA

Upstream 100 bases:

>100_bases
TCCGCCCTGCATCGAACTTCTGCAGCCGCCCGGAGCAGCGAGGCATGCTCCGCGTGGCCAGCGTTCCAGCACGGGCAGGC
TGTCACGGGAGAGGCAGTCC

Downstream 100 bases:

>100_bases
CCGCCGAGCCGGGCGCCGTTGCTGTTGCGGCGCTCATGCCCCGGGATGCCCGCCGTAGAACATGGCGGGCACCCCCGGCC
CTATGCGCAGACTTGGTGGG

Product: putative beta-mannosidase

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycosidase; Glycoside Hydrolase Family 2 TIM Barrel; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Glycoside Hydrolase Family 2 Protein; O-Glycosyl Hydrolase; Family 2 Glycosyl Hydrolase; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; Beta-Mannosidase Man2A; BETA-Mannosidase Protein

Number of amino acids: Translated: 855; Mature: 855

Protein sequence:

>855_residues
MKSQTYPDTSILASGQQALPGGRPGVAIGSTALGGEWTWVQTPAGAAESPAALDPAAGWLPAPVPGTVASALRAAGRWDD
AMPPPLHQYDHWYRVNFAGRGRRVLRFNGLATVVEAWLNGKLVLSARHMFVAHEVEVDLDGDNLMHLCFRALHPWLRKQR
GPVRWKPRMIVPPILRAIRTTLLGHMPGWCPPVHAVGPWRPVELLDPASDDILHGVRADLWGRVQGDRGVIGLHLHFPAS
APASGSFEAIDGEGCIYPGSLSRTDRFTLEGTVCVERPKLWWPHTHGEPHLYRVDATIEGRAIHCGRVGFRTISLDCSSD
AGAFALRINGEPLFCRGACISSNDLHGLADTDEASRHWLELARRGGMNMVRISGVTCYPGAAFYRICDELGLLVWHDFMF
ANFDYGSIGPGLGLTEDITREVGDWLSATLTHPSIAVLCGGSEAEQQAAMMGVSRSDWKQPLFDELIRGLVAAKRPDVVY
VGNSPTGGAWPFQPDTGVSHYYGVGAYQRPLADARLAQVRFASECLAFANVPCERTLAEHGLSQPLHSPRWKATIPRDAG
APWDFEDVREYYLRTLYEVDPPRLRYEQPQRYLVLSRAVVAEVMTEVFSEWRRVGSSCAGGLIWQLQDLVPGAGWGIVDA
CGRPKSAWHALRQVWQPLQVLITDEGLNGLHVHAINETPQPHALSLTLRCLRDGETVVAEARHSLLLPARGAARIEAAAL
LDRFFDFTYAYRFGPPTHDVVVVTLHAADSGEPLSQAVYLPDRRAAALKPPGLRARLEQVDGDWWLTVSAQRFARWVHID
DHAFQATDNWFHLAPGSSRRLRLVHEAGKAGAHAPAIPSGEIHAVNAEHPLGYDG

Sequences:

>Translated_855_residues
MKSQTYPDTSILASGQQALPGGRPGVAIGSTALGGEWTWVQTPAGAAESPAALDPAAGWLPAPVPGTVASALRAAGRWDD
AMPPPLHQYDHWYRVNFAGRGRRVLRFNGLATVVEAWLNGKLVLSARHMFVAHEVEVDLDGDNLMHLCFRALHPWLRKQR
GPVRWKPRMIVPPILRAIRTTLLGHMPGWCPPVHAVGPWRPVELLDPASDDILHGVRADLWGRVQGDRGVIGLHLHFPAS
APASGSFEAIDGEGCIYPGSLSRTDRFTLEGTVCVERPKLWWPHTHGEPHLYRVDATIEGRAIHCGRVGFRTISLDCSSD
AGAFALRINGEPLFCRGACISSNDLHGLADTDEASRHWLELARRGGMNMVRISGVTCYPGAAFYRICDELGLLVWHDFMF
ANFDYGSIGPGLGLTEDITREVGDWLSATLTHPSIAVLCGGSEAEQQAAMMGVSRSDWKQPLFDELIRGLVAAKRPDVVY
VGNSPTGGAWPFQPDTGVSHYYGVGAYQRPLADARLAQVRFASECLAFANVPCERTLAEHGLSQPLHSPRWKATIPRDAG
APWDFEDVREYYLRTLYEVDPPRLRYEQPQRYLVLSRAVVAEVMTEVFSEWRRVGSSCAGGLIWQLQDLVPGAGWGIVDA
CGRPKSAWHALRQVWQPLQVLITDEGLNGLHVHAINETPQPHALSLTLRCLRDGETVVAEARHSLLLPARGAARIEAAAL
LDRFFDFTYAYRFGPPTHDVVVVTLHAADSGEPLSQAVYLPDRRAAALKPPGLRARLEQVDGDWWLTVSAQRFARWVHID
DHAFQATDNWFHLAPGSSRRLRLVHEAGKAGAHAPAIPSGEIHAVNAEHPLGYDG
>Mature_855_residues
MKSQTYPDTSILASGQQALPGGRPGVAIGSTALGGEWTWVQTPAGAAESPAALDPAAGWLPAPVPGTVASALRAAGRWDD
AMPPPLHQYDHWYRVNFAGRGRRVLRFNGLATVVEAWLNGKLVLSARHMFVAHEVEVDLDGDNLMHLCFRALHPWLRKQR
GPVRWKPRMIVPPILRAIRTTLLGHMPGWCPPVHAVGPWRPVELLDPASDDILHGVRADLWGRVQGDRGVIGLHLHFPAS
APASGSFEAIDGEGCIYPGSLSRTDRFTLEGTVCVERPKLWWPHTHGEPHLYRVDATIEGRAIHCGRVGFRTISLDCSSD
AGAFALRINGEPLFCRGACISSNDLHGLADTDEASRHWLELARRGGMNMVRISGVTCYPGAAFYRICDELGLLVWHDFMF
ANFDYGSIGPGLGLTEDITREVGDWLSATLTHPSIAVLCGGSEAEQQAAMMGVSRSDWKQPLFDELIRGLVAAKRPDVVY
VGNSPTGGAWPFQPDTGVSHYYGVGAYQRPLADARLAQVRFASECLAFANVPCERTLAEHGLSQPLHSPRWKATIPRDAG
APWDFEDVREYYLRTLYEVDPPRLRYEQPQRYLVLSRAVVAEVMTEVFSEWRRVGSSCAGGLIWQLQDLVPGAGWGIVDA
CGRPKSAWHALRQVWQPLQVLITDEGLNGLHVHAINETPQPHALSLTLRCLRDGETVVAEARHSLLLPARGAARIEAAAL
LDRFFDFTYAYRFGPPTHDVVVVTLHAADSGEPLSQAVYLPDRRAAALKPPGLRARLEQVDGDWWLTVSAQRFARWVHID
DHAFQATDNWFHLAPGSSRRLRLVHEAGKAGAHAPAIPSGEIHAVNAEHPLGYDG

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84798622, Length=702, Percent_Identity=22.3646723646724, Blast_Score=117, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17550784, Length=624, Percent_Identity=21.6346153846154, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24643838, Length=692, Percent_Identity=23.6994219653179, Blast_Score=110, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24643840, Length=569, Percent_Identity=23.9015817223199, Blast_Score=98, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 93921; Mature: 93921

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQTYPDTSILASGQQALPGGRPGVAIGSTALGGEWTWVQTPAGAAESPAALDPAAGWL
CCCCCCCCHHHHCCCHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PAPVPGTVASALRAAGRWDDAMPPPLHQYDHWYRVNFAGRGRRVLRFNGLATVVEAWLNG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHCC
KLVLSARHMFVAHEVEVDLDGDNLMHLCFRALHPWLRKQRGPVRWKPRMIVPPILRAIRT
EEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
TLLGHMPGWCPPVHAVGPWRPVELLDPASDDILHGVRADLWGRVQGDRGVIGLHLHFPAS
HHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCC
APASGSFEAIDGEGCIYPGSLSRTDRFTLEGTVCVERPKLWWPHTHGEPHLYRVDATIEG
CCCCCCEEEECCCCCEECCCCCCCCEEEEEEEEEEECCCEECCCCCCCCEEEEEECEECC
RAIHCGRVGFRTISLDCSSDAGAFALRINGEPLFCRGACISSNDLHGLADTDEASRHWLE
CEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LARRGGMNMVRISGVTCYPGAAFYRICDELGLLVWHDFMFANFDYGSIGPGLGLTEDITR
HHHHCCCCEEEEECEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHH
EVGDWLSATLTHPSIAVLCGGSEAEQQAAMMGVSRSDWKQPLFDELIRGLVAAKRPDVVY
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCEEE
VGNSPTGGAWPFQPDTGVSHYYGVGAYQRPLADARLAQVRFASECLAFANVPCERTLAEH
ECCCCCCCCCCCCCCCCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GLSQPLHSPRWKATIPRDAGAPWDFEDVREYYLRTLYEVDPPRLRYEQPQRYLVLSRAVV
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AEVMTEVFSEWRRVGSSCAGGLIWQLQDLVPGAGWGIVDACGRPKSAWHALRQVWQPLQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHEE
LITDEGLNGLHVHAINETPQPHALSLTLRCLRDGETVVAEARHSLLLPARGAARIEAAAL
EEECCCCCCEEEEEECCCCCCCEEEEEEEEHHCCCHHHHHHHHCEEECCCCCHHHHHHHH
LDRFFDFTYAYRFGPPTHDVVVVTLHAADSGEPLSQAVYLPDRRAAALKPPGLRARLEQV
HHHHHHHHEEEECCCCCCCEEEEEEEECCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHC
DGDWWLTVSAQRFARWVHIDDHAFQATDNWFHLAPGSSRRLRLVHEAGKAGAHAPAIPSG
CCCEEEEEEHHHCEEEEEECCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCC
EIHAVNAEHPLGYDG
CEEEECCCCCCCCCC
>Mature Secondary Structure
MKSQTYPDTSILASGQQALPGGRPGVAIGSTALGGEWTWVQTPAGAAESPAALDPAAGWL
CCCCCCCCHHHHCCCHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PAPVPGTVASALRAAGRWDDAMPPPLHQYDHWYRVNFAGRGRRVLRFNGLATVVEAWLNG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHCC
KLVLSARHMFVAHEVEVDLDGDNLMHLCFRALHPWLRKQRGPVRWKPRMIVPPILRAIRT
EEEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHH
TLLGHMPGWCPPVHAVGPWRPVELLDPASDDILHGVRADLWGRVQGDRGVIGLHLHFPAS
HHHHCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHEEECCCCCEEEEEEECCCC
APASGSFEAIDGEGCIYPGSLSRTDRFTLEGTVCVERPKLWWPHTHGEPHLYRVDATIEG
CCCCCCEEEECCCCCEECCCCCCCCEEEEEEEEEEECCCEECCCCCCCCEEEEEECEECC
RAIHCGRVGFRTISLDCSSDAGAFALRINGEPLFCRGACISSNDLHGLADTDEASRHWLE
CEEEECCCCEEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
LARRGGMNMVRISGVTCYPGAAFYRICDELGLLVWHDFMFANFDYGSIGPGLGLTEDITR
HHHHCCCCEEEEECEEECCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHH
EVGDWLSATLTHPSIAVLCGGSEAEQQAAMMGVSRSDWKQPLFDELIRGLVAAKRPDVVY
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCCEEE
VGNSPTGGAWPFQPDTGVSHYYGVGAYQRPLADARLAQVRFASECLAFANVPCERTLAEH
ECCCCCCCCCCCCCCCCCCCEECCCCHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
GLSQPLHSPRWKATIPRDAGAPWDFEDVREYYLRTLYEVDPPRLRYEQPQRYLVLSRAVV
CCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
AEVMTEVFSEWRRVGSSCAGGLIWQLQDLVPGAGWGIVDACGRPKSAWHALRQVWQPLQV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHEE
LITDEGLNGLHVHAINETPQPHALSLTLRCLRDGETVVAEARHSLLLPARGAARIEAAAL
EEECCCCCCEEEEEECCCCCCCEEEEEEEEHHCCCHHHHHHHHCEEECCCCCHHHHHHHH
LDRFFDFTYAYRFGPPTHDVVVVTLHAADSGEPLSQAVYLPDRRAAALKPPGLRARLEQV
HHHHHHHHEEEECCCCCCCEEEEEEEECCCCCCHHHEEECCCCCCCCCCCCCHHHHHHHC
DGDWWLTVSAQRFARWVHIDDHAFQATDNWFHLAPGSSRRLRLVHEAGKAGAHAPAIPSG
CCCEEEEEEHHHCEEEEEECCCEEECCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCC
EIHAVNAEHPLGYDG
CEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA