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The map label for this gene is oxaA [H]

Identifier: 116691180

GI number: 116691180

Start: 3481039

End: 3482697

Strand: Reverse

Name: oxaA [H]

Synonym: Bcen2424_3163

Alternate gene names: 116691180

Gene position: 3482697-3481039 (Counterclockwise)

Preceding gene: 116691181

Following gene: 116691178

Centisome position: 99.97

GC content: 63.83

Gene sequence:

>1659_bases
ATGGATATCAAACGCACCGTCCTATGGGTGATCTTCTTCATGTCAGCTGTCATGCTGTACGACAACTGGCAGCGGGACCA
TGGACGCCCGTCGATGTTCTTCCCGAGCGCCACGCACACGGCCCCGGCCGCTGCCGGCGGCGCATCGGGCACGAGCGCGA
CGACCGCAGGTGACGTGCCTGCCGCTGCAGCCGGCGCTGCACCGTCGACGACGGCCCCGGCCGCGCAGGCGCAGCTCGTG
AAGTTCTCGACCGACGTGTACGACGGCGAAATCGACACGCGCGGCGGCACGCTCGCGAAGCTGACGCTGAAGAAGCAGGG
CGACGGCAAGCAGCCCGACCTGTACATCACGCTGTTCGACCACACGGCCGGCCACACGTATCTCGCACGCACGGGCCTGC
TCGGCGGCGATTTCCCGAACCACAACGACGTCTACACGCAGCTGAACCCCGGCTCGACGTCGCTGACGGGTGACGAGAAT
ACGCTGAAGCTGTCGTTCGAATCGCCGGTGAAGGGCGGCGTGAAGGTCGTGAAGACCTACACGTTCACGCGCGGCAGCTA
CGTGATCGGCGTCGACACCAAGATCGACAACGTCGGCACGGCACCGGTCACGCCGACGGTCTACATGGAACTGGTGCGCG
ACAACACGGCCGTCGAAACGCCGATGTTCTCGCATACGTTCCTCGGGCCGGCGGTCTACACGGACGCGAAGCACTTCCAG
AAGATCGACTTCAGCGACCTCGACAAGAACAAGGCGAACTTCGAGAAGTCCTCGGACAACGGCTGGGTCGCGATGGTGCA
GCACTACTTCGCGTCGGCCTGGATTCCGCAGCAGGGCGCGAAGCGCGACATCTACGCTGAAAAGATCGACCCGACGCTGT
ACCGCGTCGGCGTGAAGCAGCCGGTCGCCGCGATCGCCCCGGGCCAGTCGGCCGACGTGCAGGCGCGCCTGTTCGCCGGT
CCGGAAGAAGAGCGCATGCTCGAAGGCATCGCGCCGGGCCTGGAGCTCGTGAAGGATTACGGCTGGGTGACGATCATCGC
GAAGCCGCTGTTCTGGCTGCTCGAGAAGATCCACGGCTATGTCGGCAACTGGGGCTGGGCGATCGTGCTGCTGACGGTGC
TGATCAAGGCCGTGTTCTTCCCGCTGTCGGCCGCGAGCTACAAGTCGATGGCGCGCATGAAGGAAATCACGCCGCGCATG
CAGGCGCTGCGCGAACGCTTCAAGAGCGATCCGCAGAAGATGAACGCCGCGCTGATGGAGCTGTACAAGACCGAGAAGGT
CAATCCGTTCGGCGGCTGCCTGCCGGTCGTGATCCAGATTCCGGTGTTCATCTCGCTGTACTGGGTGCTGCTCGCGTCGG
TCGAAATGCGCGGCGCGCCGTGGATTCTGTGGATTCACGACCTGTCGCAGCGCGATCCGTTCTTCATCCTGCCGGTGCTG
ATGGCCGTGTCGATGTTCGTGCAGACGAGCCTGAACCCGACGCCGCCGGACCCGGTCCAGGCGAAGATGATGAAGTTCAT
GCCGATCGCGTTCTCGGTGATGTTCTTCTTCTTCCCGGCAGGTCTCGTGCTGTACTACGTCGTGAACAACGTGCTGTCGA
TCGCGCAGCAGTACTACATCACGCGCAAGCTCGGCGGCGTCAAGAAGAAGCCGGCCTGA

Upstream 100 bases:

>100_bases
CGTTTTCCGCGGGCGGCGTCGACCTCGTCCCGCCGCCCAACTCCGACACTCGCGCTCGCGGCGAAGCCGACGCGCGGTCC
CATCGACTCTGAGACAACGC

Downstream 100 bases:

>100_bases
CGCGCGTTGCAACCGCGGGTGGCTCGCCGCCCGCGATGCTCGCAAAAAAAGCCGCATGGTTCGTGACCATGCGGCTTTTT
GTTTGCCCGGCGTTTTCCCG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVPAAAAGAAPSTTAPAAQAQLV
KFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDEN
TLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQ
KIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRM
QALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVL
MAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVKKKPA

Sequences:

>Translated_552_residues
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVPAAAAGAAPSTTAPAAQAQLV
KFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDEN
TLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQ
KIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRM
QALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVL
MAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVKKKPA
>Mature_552_residues
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVPAAAAGAAPSTTAPAAQAQLV
KFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDEN
TLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQ
KIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARLFAG
PEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRM
QALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVL
MAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVKKKPA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=560, Percent_Identity=35.7142857142857, Blast_Score=368, Evalue=1e-103,
Organism=Drosophila melanogaster, GI24662345, Length=191, Percent_Identity=26.1780104712042, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356443, Length=191, Percent_Identity=26.1780104712042, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 60874; Mature: 60874

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVP
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFD
CHHCCCCCCCCCCHHHHHHHEEECCCCCCEEECCCCEEEEEEEEECCCCCCCCEEEEEEE
HTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVVKTY
CCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
TFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQ
EEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCHHHHH
KIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPTLYRVGVKQ
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHEECCCCC
PVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGY
CHHHCCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
VGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALME
HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHH
MAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRKLGGVKKKPA
HHHHCCCCCCCC
>Mature Secondary Structure
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTSATTAGDVP
CCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFD
CHHCCCCCCCCCCHHHHHHHEEECCCCCCEEECCCCEEEEEEEEECCCCCCCCEEEEEEE
HTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDENTLKLSFESPVKGGVKVVKTY
CCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
TFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQ
EEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCHHHHH
KIDFSDLDKNKANFEKSSDNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPTLYRVGVKQ
CCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHEECCCCC
PVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGY
CHHHCCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCEEEEHHHHHHHHHHHHHHH
VGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALME
HCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVL
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHH
MAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYI
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRKLGGVKKKPA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA