| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691179
Identifier: 116691179
GI number: 116691179
Start: 3480448
End: 3480903
Strand: Direct
Name: 116691179
Synonym: Bcen2424_3162
Alternate gene names: NA
Gene position: 3480448-3480903 (Clockwise)
Preceding gene: 116691177
Following gene: NA
Centisome position: 99.9
GC content: 62.5
Gene sequence:
>456_bases ATGGAATTGCACAATCTCCCCATGCCGACATCCGAAGAAAAAGCCGCGTTCTCGGAACGCCTGAAATTCGCCCTGCGGCG CAGCCCGGAGAAGGTCACCGGCGCGACGGAGCTGGCGAACCGATTCAATCTGCGTCACCGCGGAACGCACCCCGTTTCGC CGCAAACCGCGCACAAATGGCTGACGGGCCGCACGATCCCGACGTCGGACAAACTCGAAACGCTCGCCGAATGGTTGCGC GTCGAAGTGCACTGGCTGCATTACGGGCCGTCGCCGAGCGTGATCGAACATCCGACGCCGCAACCGCTGCCGCGCGACGA ACGCTATCCGCCCACGCCCGAGACGATCGAACTCGCATCGAAGATCGAGGCGTTGTCGCCGCATCAGCGCTACCTCGTGC AGGAACTGGTCGAACAGTTCTACGGCGATCCGAAACTCGAAGCGAAGAAGGCCTGA
Upstream 100 bases:
>100_bases GCCTGGCACCGCGTCCCTCAATTTCATTCCCCATCCTGACCAAGCGGGGATTCGTCCGAATAGGATACGTTTATCCCATA TGGTTGTCTGGGACGCGGCG
Downstream 100 bases:
>100_bases ACGGCAGCAACCGCACGCGCCGCCGCCGTCGTCGCCGGGAAAACGCCGGGCAAACAAAAAGCCGCATGGTCACGAACCAT GCGGCTTTTTTTGCGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MELHNLPMPTSEEKAAFSERLKFALRRSPEKVTGATELANRFNLRHRGTHPVSPQTAHKWLTGRTIPTSDKLETLAEWLR VEVHWLHYGPSPSVIEHPTPQPLPRDERYPPTPETIELASKIEALSPHQRYLVQELVEQFYGDPKLEAKKA
Sequences:
>Translated_151_residues MELHNLPMPTSEEKAAFSERLKFALRRSPEKVTGATELANRFNLRHRGTHPVSPQTAHKWLTGRTIPTSDKLETLAEWLR VEVHWLHYGPSPSVIEHPTPQPLPRDERYPPTPETIELASKIEALSPHQRYLVQELVEQFYGDPKLEAKKA >Mature_151_residues MELHNLPMPTSEEKAAFSERLKFALRRSPEKVTGATELANRFNLRHRGTHPVSPQTAHKWLTGRTIPTSDKLETLAEWLR VEVHWLHYGPSPSVIEHPTPQPLPRDERYPPTPETIELASKIEALSPHQRYLVQELVEQFYGDPKLEAKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17358; Mature: 17358
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHNLPMPTSEEKAAFSERLKFALRRSPEKVTGATELANRFNLRHRGTHPVSPQTAHKW CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LTGRTIPTSDKLETLAEWLRVEVHWLHYGPSPSVIEHPTPQPLPRDERYPPTPETIELAS HCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KIEALSPHQRYLVQELVEQFYGDPKLEAKKA HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MELHNLPMPTSEEKAAFSERLKFALRRSPEKVTGATELANRFNLRHRGTHPVSPQTAHKW CCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LTGRTIPTSDKLETLAEWLRVEVHWLHYGPSPSVIEHPTPQPLPRDERYPPTPETIELAS HCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH KIEALSPHQRYLVQELVEQFYGDPKLEAKKA HHHHCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA