| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is speG [H]
Identifier: 116691174
GI number: 116691174
Start: 3475614
End: 3476156
Strand: Reverse
Name: speG [H]
Synonym: Bcen2424_3157
Alternate gene names: 116691174
Gene position: 3476156-3475614 (Counterclockwise)
Preceding gene: 116691178
Following gene: 116691173
Centisome position: 99.78
GC content: 60.59
Gene sequence:
>543_bases ATGCAACTCCAGAACGATACCAACACGCTCGCGCTGCGGCCGCTGGAGCGCCAGGACCTGCGCTTCGTCCACGAGCTGAA CAACGACGCGAAGATCATGCGCTACTGGTTCGAGGAGCCGTACGAAACCTTCTCGGAACTGTCGCAACTGTACGACCGCC ACGTACACGACCAGCGCGAGCGCCGTTTCGTCGCGGTCGATGCGCAGGACGAACTGGTCGGCCTCGTCGAGCTGATCGAG CTCGACTACATCCATCGCCGCGGCGAGTTCCAGATCATCATCGCGCCGCAGCGCCAGGGGCGCGGGTATGCGGGCCAGGC GACGCGCCTCGCGATCGAGTACGCGTTCAAGGTGCTGAACATGCGCAAGCTGTACCTGATCGTCGATACGTCGAACGCGG CGGCGATTCACGTGTACGAGAAATGCGGATTCCAGCACGAGGCCGAATTGAAGGAGGAATTTTTCGGGAATGGCGCGTAT CACAACGCTTATCGCATGTGCATCTTTCAGCGCGATTATTTCGAGCGGCAGCAAACCGCCTGA
Upstream 100 bases:
>100_bases CTCCGCCCGCGTTCAATTTCTTACAGTGCGAAACGGGCCCGAACGCGGCCGCGCCGCGCGGGCGTTCCGCACGTGCGCCG GCCTCAAAAAGGACATGAAC
Downstream 100 bases:
>100_bases ATGAAGCAGGGTAAACGCCATACCGGTAAATGCGTTTGCGACGACGCGTCGCGAGCGCCGAATACAGGCGGGGAACTCCG GATAAATACGGATACGCTTA
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Diamine acetyltransferase; SAT [H]
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MQLQNDTNTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFSELSQLYDRHVHDQRERRFVAVDAQDELVGLVELIE LDYIHRRGEFQIIIAPQRQGRGYAGQATRLAIEYAFKVLNMRKLYLIVDTSNAAAIHVYEKCGFQHEAELKEEFFGNGAY HNAYRMCIFQRDYFERQQTA
Sequences:
>Translated_180_residues MQLQNDTNTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFSELSQLYDRHVHDQRERRFVAVDAQDELVGLVELIE LDYIHRRGEFQIIIAPQRQGRGYAGQATRLAIEYAFKVLNMRKLYLIVDTSNAAAIHVYEKCGFQHEAELKEEFFGNGAY HNAYRMCIFQRDYFERQQTA >Mature_180_residues MQLQNDTNTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFSELSQLYDRHVHDQRERRFVAVDAQDELVGLVELIE LDYIHRRGEFQIIIAPQRQGRGYAGQATRLAIEYAFKVLNMRKLYLIVDTSNAAAIHVYEKCGFQHEAELKEEFFGNGAY HNAYRMCIFQRDYFERQQTA
Specific function: Regulates polyamine concentration by their degradation. Acts on spermidine, forming N(1)- and N(8)-acetylspermidine [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787867, Length=175, Percent_Identity=59.4285714285714, Blast_Score=224, Evalue=2e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.57 [H]
Molecular weight: Translated: 21488; Mature: 21488
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLQNDTNTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFSELSQLYDRHVHDQRE CCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHH RRFVAVDAQDELVGLVELIELDYIHRRGEFQIIIAPQRQGRGYAGQATRLAIEYAFKVLN CEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC MRKLYLIVDTSNAAAIHVYEKCGFQHEAELKEEFFGNGAYHNAYRMCIFQRDYFERQQTA EEEEEEEEECCCCEEEEEHHHCCCCCHHHHHHHHCCCCCCCHHHHHEEEHHHHHHHHCCC >Mature Secondary Structure MQLQNDTNTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFSELSQLYDRHVHDQRE CCCCCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHH RRFVAVDAQDELVGLVELIELDYIHRRGEFQIIIAPQRQGRGYAGQATRLAIEYAFKVLN CEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC MRKLYLIVDTSNAAAIHVYEKCGFQHEAELKEEFFGNGAYHNAYRMCIFQRDYFERQQTA EEEEEEEEECCCCEEEEEHHHCCCCCHHHHHHHHCCCCCCCHHHHHEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]