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The map label for this gene is yecS [C]

Identifier: 116691157

GI number: 116691157

Start: 3455809

End: 3456489

Strand: Reverse

Name: yecS [C]

Synonym: Bcen2424_3139

Alternate gene names: 116691157

Gene position: 3456489-3455809 (Counterclockwise)

Preceding gene: 116691158

Following gene: 116691156

Centisome position: 99.21

GC content: 65.2

Gene sequence:

>681_bases
ATGCCGGCCTGGCTGCACCTGATGGCGGAATCGCTGCGGCCCCTGCTCGTTGCAGGGCTCGTGTTTACGGTTCCGCTCAC
GCTCGCGTCGTTCGCGATCGGTTTATTGCTTGCGTTCGGCGCGGCGCTCACGCGGCTGTTCGGGCCGCGCTGGGCGCAGG
CCGTCGTGCGGTTCTATATCTGGCTGTTTCGCGGCTCGCCGCTGCTCGTGCAACTGTTCGTGATCTTCTACGGATTGCCG
AACGTCGGCATCGTGCTCGATCCGCTGACGGCCGCCGTGATCGGTTTCTCGCTGAACGTCGGCGCATACAACGCGGAAGT
GATTCGCGGCGTGATCGAATCGATGCCCAAGGGGCAGTGGGAGGCCGCGTACTCGATGTCGATGACGCGCGCGCAGGCAC
TGCGTCGCGCGATCCTGCCGCAGGCCGCGCGTGTCGCGCTGTCCGCGCTGTCGAATTCATTCATTTCGCTCGTGAAGGAC
ACGTCGCTCGCTGCCGTGCTGACGGTGCCCGAGATCTTCCAGGCCGCGCAACGCATCGCGGCCGTGACCTACGAGCCGCT
GATCCTCTATACCGAAGCCGCGCTGATCTACCTGCTGTTCAGCTCGGTGCTGTCGTCGCTACAACGCCGGCTGGAGCTTC
GCTTCGGCCGCCACGCGCTGTTCCAGGCGGAGTTGCGATGA

Upstream 100 bases:

>100_bases
ACAAGGCGCTCGCGGACATCAAGGCGGACGGTACCTACGCGAAGATCTCGCAGAAGTACTTCGGCCGCGACGTGTCGCAG
CCGTGACGCGAGGCTGAACG

Downstream 100 bases:

>100_bases
TCCGCCTCGAACGCATCGACAAGTCGTTCGGCACGCACCGCGTGCTGAGCGGGATCGACCTCGCGCTGCAGCCGGGCAGC
GTGACCGCGCTGATCGGCCC

Product: polar amino acid ABC transporter, inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKD
TSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHALFQAELR

Sequences:

>Translated_226_residues
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKD
TSLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHALFQAELR
>Mature_225_residues
PAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYIWLFRGSPLLVQLFVIFYGLPN
VGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQWEAAYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKDT
SLAAVLTVPEIFQAAQRIAAVTYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHALFQAELR

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=215, Percent_Identity=53.4883720930233, Blast_Score=206, Evalue=9e-55,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=37.4384236453202, Blast_Score=123, Evalue=8e-30,
Organism=Escherichia coli, GI1788645, Length=230, Percent_Identity=34.7826086956522, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=32.5358851674641, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=30.1369863013699, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082239, Length=207, Percent_Identity=35.2657004830918, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787087, Length=165, Percent_Identity=31.5151515151515, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=32.5471698113208, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1786874, Length=213, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48994930, Length=91, Percent_Identity=39.5604395604396, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24823; Mature: 24692

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
EAAYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AVTYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHALFQAELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PAWLHLMAESLRPLLVAGLVFTVPLTLASFAIGLLLAFGAALTRLFGPRWAQAVVRFYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAVIGFSLNVGAYNAEVIRGVIESMPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCH
EAAYSMSMTRAQALRRAILPQAARVALSALSNSFISLVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
AVTYEPLILYTEAALIYLLFSSVLSSLQRRLELRFGRHALFQAELR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]