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The map label for this gene is smf [H]

Identifier: 116691146

GI number: 116691146

Start: 3443388

End: 3444815

Strand: Direct

Name: smf [H]

Synonym: Bcen2424_3128

Alternate gene names: 116691146

Gene position: 3443388-3444815 (Clockwise)

Preceding gene: 116691132

Following gene: 116691147

Centisome position: 98.84

GC content: 72.69

Gene sequence:

>1428_bases
ATGAAGATGAGGCGGATGCGTGGCATATCAATGCCGCGAATCGCGCCTCCTGCAATCGGCCGCGTGCCTGCGCGCACGGC
CCTGTCGAGTATTTCGGATGATGAAAATTTTATCATGGCGCCACACGCTCCGCTGGCCGCCGCATTCGAGGGCCACCTCA
TGTCCCCGCAAGCGTTGAGGCCCGCCGCGCTGCGCGCCTGGCTGCAGCTCGCGCATGCGCCCGGTCTCTCGCCCGCCGTG
CTGCAGGTGCTGCTCGCGGCTTTCGGCTCGCCGGAAGCGCTGCTGCGCGCGCCCGACGAGGCAATCGCCGCCGTGGCCAG
CCCCGCCGCCGCGCAGGCCGTGCGCGCGAGCGAGCGCGACGATCTCGATACGCGCACCGGCGCCGCGCTCGCGTGGCTCG
ACGGGCCGGGCAACGTGCTCGTCACGCTGAGCGATCCGGCCTACCCGCCGCGGCTGCGCGATCTGCACGATCCGCCGCCG
CTGCTATATGTAAAGGGGCGGCTCGACCTGCTGCACGCACGCGGCCTCGCGGTGGTCGGCAGCCGCCATGCGACGCCGCA
GGGGCTCGCCGACGCCACGCATTTCGCCCACGCGTTGTCCGACGCAGGCCTCACGATCGTCTCGGGCCTCGCACTCGGTA
TCGACGGCGCCGCGCATCGCGGCGGGCTCGACGGCCGCTCGGGCACCGTCGCGGTGATCGCGACGGGCGCCGATCTCGTC
TACCCGGCGCGACACCGCGCGCTCGCGCACGAGATCGCCGCACACGGCGCGATCGTGTCGGAATGGCCGCTCGGCACGCC
GGCCCGCGCCGCGCATTTCCCGCAGCGCAACCGGCTGATCGCCGCGCTCGCGATCGGCGCGCTCGTCGTCGAGGCCGCCC
CGCGCTCGGGGTCGCTGATCACCGCGCGGCTCGCGAACGAATTGGGGCGCGACGTGTTCGCGATGCCCGGTTCGATCCAC
GCCCCGCTCGCGCAGGGCTGCCACGCGCTGATCCGCGACGGCGCGAAGCTCACCGCGGCGCCGCTCGACGTGCTCGAGGA
ATACGGGCTGGGCGAACCGGCGGCGCGCGCAACGAGCGGCGCAATGCGAGCCGGTAATCAGGGCCCGAATGCCGACGAGA
TCCGCGAACCCGAAGCTGCCGGCATCGCGCAAACGAATCGCACCGCCGCGACCACCGCACCGGCCTCCATCGAAGCCGCT
CCACCAGGCACCCCGTCGGAACAGGCGGTGCTCACCGCGCTGGGATACGGCCCCGTGACGTACGAATGGCTGGCCGAGCA
CAGCGGCCTGTCCAACGACGTGCTGCATGGCGCGCTGCTCGCGCTGGAGCTGGCTGGCCGCGTCGCAAGCGTCGCCGGCG
GACGCTTCGCGCGGCTTGACGCCGCGCCCACCCCCTCTGCGCGGGGCGTGCTACATTCCCCGGCATAG

Upstream 100 bases:

>100_bases
GGGTAATGAAGAATATTGAGCAATGCCATGGTGTTCGGTATTCGGTGGAGCGGCGTGCCGCATCGGCCATCCGGCCGGCT
GGCGCCGCCGCCGGGATGCA

Downstream 100 bases:

>100_bases
GGGCGGTCCGGCCGCCGACGCTACCCAAGGAATTCCATGCCCGCGCTGAATCTCGACACCGATGCAGATCGGATCGCCGA
GCGCCTCGCCGATCCCGGCA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKMRRMRGISMPRIAPPAIGRVPARTALSSISDDENFIMAPHAPLAAAFEGHLMSPQALRPAALRAWLQLAHAPGLSPAV
LQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLDTRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPP
LLYVKGRLDLLHARGLAVVGSRHATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLV
YPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIH
APLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAMRAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAA
PPGTPSEQAVLTALGYGPVTYEWLAEHSGLSNDVLHGALLALELAGRVASVAGGRFARLDAAPTPSARGVLHSPA

Sequences:

>Translated_475_residues
MKMRRMRGISMPRIAPPAIGRVPARTALSSISDDENFIMAPHAPLAAAFEGHLMSPQALRPAALRAWLQLAHAPGLSPAV
LQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLDTRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPP
LLYVKGRLDLLHARGLAVVGSRHATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLV
YPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIH
APLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAMRAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAA
PPGTPSEQAVLTALGYGPVTYEWLAEHSGLSNDVLHGALLALELAGRVASVAGGRFARLDAAPTPSARGVLHSPA
>Mature_475_residues
MKMRRMRGISMPRIAPPAIGRVPARTALSSISDDENFIMAPHAPLAAAFEGHLMSPQALRPAALRAWLQLAHAPGLSPAV
LQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERDDLDTRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPP
LLYVKGRLDLLHARGLAVVGSRHATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLV
YPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIH
APLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSGAMRAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAA
PPGTPSEQAVLTALGYGPVTYEWLAEHSGLSNDVLHGALLALELAGRVASVAGGRFARLDAAPTPSARGVLHSPA

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=225, Percent_Identity=45.3333333333333, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 48720; Mature: 48720

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRRMRGISMPRIAPPAIGRVPARTALSSISDDENFIMAPHAPLAAAFEGHLMSPQALR
CCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHCCCCCCCHHCC
PAALRAWLQLAHAPGLSPAVLQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCHHHHHHHHHCCCC
DLDTRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPPLLYVKGRLDLLHARGLAVVG
CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEHHHCCEEEEC
SRHATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLV
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCC
YPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLI
CCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCEE
TARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSG
HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHH
AMRAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAAPPGTPSEQAVLTALGYGPVT
HHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHEEEEECCCCCH
YEWLAEHSGLSNDVLHGALLALELAGRVASVAGGRFARLDAAPTPSARGVLHSPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKMRRMRGISMPRIAPPAIGRVPARTALSSISDDENFIMAPHAPLAAAFEGHLMSPQALR
CCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCHHHHHCCCCCCCHHCC
PAALRAWLQLAHAPGLSPAVLQVLLAAFGSPEALLRAPDEAIAAVASPAAAQAVRASERD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCHHHHHHHHHCCCC
DLDTRTGAALAWLDGPGNVLVTLSDPAYPPRLRDLHDPPPLLYVKGRLDLLHARGLAVVG
CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEHHHCCEEEEC
SRHATPQGLADATHFAHALSDAGLTIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLV
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCC
YPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRLIAALAIGALVVEAAPRSGSLI
CCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHCCHHHHHHHHHHHHCCCCCCCEE
TARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTAAPLDVLEEYGLGEPAARATSG
HHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHH
AMRAGNQGPNADEIREPEAAGIAQTNRTAATTAPASIEAAPPGTPSEQAVLTALGYGPVT
HHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHEEEEECCCCCH
YEWLAEHSGLSNDVLHGALLALELAGRVASVAGGRFARLDAAPTPSARGVLHSPA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]