Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116691140

Identifier: 116691140

GI number: 116691140

Start: 3437858

End: 3438448

Strand: Reverse

Name: 116691140

Synonym: Bcen2424_3122

Alternate gene names: NA

Gene position: 3438448-3437858 (Counterclockwise)

Preceding gene: 116691141

Following gene: 116691139

Centisome position: 98.7

GC content: 65.48

Gene sequence:

>591_bases
GTGACGATCAAACACCTTTTTCCCTTTCGGCTCGCGGCCGTCTTGCTGGTCGCGTTGACGCTGTGCCTGGCCGTCGTCCG
GCCGGCGCATGCCGAATCGATCGCCGTGCAGCGCGCGTCGCTCCAGTCCGACGGAAGCGGCTGGAGCCTGGACGCGCGGT
TCGACTTCGAGCTGAATCCGAACCTCGAGGATGCCGTCAACAAGGGCATCCCGCTTTACTTCACGACCGACTTCGAGCTG
AGCCGCGCGCGCTGGTACTGGTTCGACGAGCAGCCGGTGGCGGTCACGCAGACGATCCGCCTGTCGTTCCAGCCGCTCAC
GCGCGAGTACCGCGTGTCGACCGGCGGCCTGCAGCTCGGCTTCCCGTCGCTGAAGGATGCGCTCGCGGTGGTCCGCCACA
TCACGTCGTGGCACGTGATCGACCGTAACCAGGTGCGGGCGGGCGAAACCTACACGGCGTCGGTGCGGATGCAGCTCGAC
ACGGCGCTGATGCCGAAGCCGTTCCAGGTCGATGCCGTGAACAACCGCGACTGGACGCTCGGGTCGGACTGGAAGCGCTT
CAACTTCACGGTGACCGAACGTGCTAAATAA

Upstream 100 bases:

>100_bases
GCCAACTGCTGCCGGGCAGCGTGCAGGGACGGGCGGCCGCCGGCGCACTCGACCAGAACACCGATCACGACGGATTTTTC
TACGCGCGGTTTCAGAAACG

Downstream 100 bases:

>100_bases
AGTACGCCGCGCGGCCAGCGGGAAGAGCCTCCTCATCCGCGTGATCGTCTCGACGGTCGCGATCACCGCACTGCTGCTGC
TCGTGCTGCTCGCGGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Protein

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTIKHLFPFRLAAVLLVALTLCLAVVRPAHAESIAVQRASLQSDGSGWSLDARFDFELNPNLEDAVNKGIPLYFTTDFEL
SRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRAGETYTASVRMQLD
TALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK

Sequences:

>Translated_196_residues
MTIKHLFPFRLAAVLLVALTLCLAVVRPAHAESIAVQRASLQSDGSGWSLDARFDFELNPNLEDAVNKGIPLYFTTDFEL
SRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRAGETYTASVRMQLD
TALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK
>Mature_195_residues
TIKHLFPFRLAAVLLVALTLCLAVVRPAHAESIAVQRASLQSDGSGWSLDARFDFELNPNLEDAVNKGIPLYFTTDFELS
RARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRAGETYTASVRMQLDT
ALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22330; Mature: 22199

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKHLFPFRLAAVLLVALTLCLAVVRPAHAESIAVQRASLQSDGSGWSLDARFDFELNP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECC
NLEDAVNKGIPLYFTTDFELSRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLG
CHHHHHHCCCCEEEEECCEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEC
FPSLKDALAVVRHITSWHVIDRNQVRAGETYTASVRMQLDTALMPKPFQVDAVNNRDWTL
CHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCC
GSDWKRFNFTVTERAK
CCCCEEEEEEEECCCC
>Mature Secondary Structure 
TIKHLFPFRLAAVLLVALTLCLAVVRPAHAESIAVQRASLQSDGSGWSLDARFDFELNP
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEECC
NLEDAVNKGIPLYFTTDFELSRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLG
CHHHHHHCCCCEEEEECCEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEC
FPSLKDALAVVRHITSWHVIDRNQVRAGETYTASVRMQLDTALMPKPFQVDAVNNRDWTL
CHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCC
GSDWKRFNFTVTERAK
CCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA