| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mreC [H]
Identifier: 116691129
GI number: 116691129
Start: 3425257
End: 3426333
Strand: Direct
Name: mreC [H]
Synonym: Bcen2424_3111
Alternate gene names: 116691129
Gene position: 3425257-3426333 (Clockwise)
Preceding gene: 116691128
Following gene: 116691130
Centisome position: 98.32
GC content: 71.03
Gene sequence:
>1077_bases ATGGAATACAGTCCGCCGCCCCTCTTCAAGCAAGGTCCGCCCGCGCTCGCGCGGCTCATCTTCTTCGTCGCCCTCGCCAT CGCGCTCCTCGTGTCGGACGCGCGCTTCAGCACGCTCGAAATCGTGCGCGGCGTGCTCGGCACCGTGCTCTACCCGCTGC AACGCGCGGCGCTCGTGCCGCGCGACCTGTTCATGGGCGCGGCCGACCTCGCCGTCACCGGCGCGGCGCTGCGCCACGAG AACGACGATCTCCGCAAGCGCAACCTGCAATTGTCGACGCAGGCCAACCAGGCCGCCGTGCTCACGCAGGAGAACGCGCA CCTGCGCGCGGTGCTCGAACTGCGCCAGCACATCGCGACGCAATCGACGCCGGTCGAGATCCAGTACGACACGAGCGATC CGTTCACGCAGAAGATCGTGGTCGGGCAAGGCTCGCAGCAAGGCATCCAGGACGGCTCGCCCGTCGTCAGCGAGGACGGC GTGATCGGCCAGGTCACGCGCGTGTTCCCGCTGCAATCCGAAGTCACGCTGGTCACCGACCGCGATCTCGCGATTCCCGT GCAGGTGCTGCGCACCGGCCTGCGCAGCGTGATCTACGGCACGCCGAAGGGCGATTCGCTCGACCTGCGCTTCGTGCCGA CCAGCGCGGATCTCGTCGCCGGCGACGAGCTGATCACGAGCGGCCTCGATGGCGTCTATCCGCCCGGCCTGCCGGTCGCC AAGGTCGTGCGCGTCGACAAGCTCGCCGATACCGCGTTCGCCCGGGTGACCTGCGCACCGGTCGCGGCCGTGCGCGGCGC GCGCCAGATGCTCGTGCTGCATTACCGCAACGACATCCCGCCGCGTCCGGCCGAGCCCGATCCCGCCGCCGAGAAGAACG CGAAGGGCAAGAAGGGCGCGAAAGCCGCCGCGAAGGGCGAAAAGGCCGAGAAAGCCGACAAGGCCGACGCGAACGCGAAG CCGGCCGCCGCGGCCCAGCCCGGCGCGAAACCGGCGCCGGCGGCTCCTGCGGCGCCGGCCCAGCCCGCCGCCGCGCCCGC GAAGCCCGCCGCCGGGCAATCAGGAGCCCAGCGATGA
Upstream 100 bases:
>100_bases CGCACCCGCGGCGTGGCCGGATCGCTCGTTCAGAACGAACCGCCGCGCCGTTTGCGCGTCTGAGCATTATTTAACCGATC ACACGCGCCCGGCGCCGACC
Downstream 100 bases:
>100_bases ACCGCCCGCAATACATCCTGCAGCCGGTCAATCCGTACTTCATCGTCTTCAGCCTCGCCGCCGCGTTCCTGCTGAACCTG ATGCCATGGGGCCGCCTGCC
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR
Sequences:
>Translated_358_residues MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR >Mature_358_residues MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=259, Percent_Identity=33.976833976834, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 37524; Mature: 37524
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDLFMGAADLAVTGAALRHENDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIAT HHHHHCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHC QSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDGVIGQVTRVFPLQSEVTLVTD CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHEEECCCCEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCHH KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KAAAKGEKAEKADKADANAKPAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVP CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC RDLFMGAADLAVTGAALRHENDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIAT HHHHHCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHC QSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDGVIGQVTRVFPLQSEVTLVTD CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHEEECCCCEEEEEC RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCHH KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGA HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC KAAAKGEKAEKADKADANAKPAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]