Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is mreC [H]

Identifier: 116691129

GI number: 116691129

Start: 3425257

End: 3426333

Strand: Direct

Name: mreC [H]

Synonym: Bcen2424_3111

Alternate gene names: 116691129

Gene position: 3425257-3426333 (Clockwise)

Preceding gene: 116691128

Following gene: 116691130

Centisome position: 98.32

GC content: 71.03

Gene sequence:

>1077_bases
ATGGAATACAGTCCGCCGCCCCTCTTCAAGCAAGGTCCGCCCGCGCTCGCGCGGCTCATCTTCTTCGTCGCCCTCGCCAT
CGCGCTCCTCGTGTCGGACGCGCGCTTCAGCACGCTCGAAATCGTGCGCGGCGTGCTCGGCACCGTGCTCTACCCGCTGC
AACGCGCGGCGCTCGTGCCGCGCGACCTGTTCATGGGCGCGGCCGACCTCGCCGTCACCGGCGCGGCGCTGCGCCACGAG
AACGACGATCTCCGCAAGCGCAACCTGCAATTGTCGACGCAGGCCAACCAGGCCGCCGTGCTCACGCAGGAGAACGCGCA
CCTGCGCGCGGTGCTCGAACTGCGCCAGCACATCGCGACGCAATCGACGCCGGTCGAGATCCAGTACGACACGAGCGATC
CGTTCACGCAGAAGATCGTGGTCGGGCAAGGCTCGCAGCAAGGCATCCAGGACGGCTCGCCCGTCGTCAGCGAGGACGGC
GTGATCGGCCAGGTCACGCGCGTGTTCCCGCTGCAATCCGAAGTCACGCTGGTCACCGACCGCGATCTCGCGATTCCCGT
GCAGGTGCTGCGCACCGGCCTGCGCAGCGTGATCTACGGCACGCCGAAGGGCGATTCGCTCGACCTGCGCTTCGTGCCGA
CCAGCGCGGATCTCGTCGCCGGCGACGAGCTGATCACGAGCGGCCTCGATGGCGTCTATCCGCCCGGCCTGCCGGTCGCC
AAGGTCGTGCGCGTCGACAAGCTCGCCGATACCGCGTTCGCCCGGGTGACCTGCGCACCGGTCGCGGCCGTGCGCGGCGC
GCGCCAGATGCTCGTGCTGCATTACCGCAACGACATCCCGCCGCGTCCGGCCGAGCCCGATCCCGCCGCCGAGAAGAACG
CGAAGGGCAAGAAGGGCGCGAAAGCCGCCGCGAAGGGCGAAAAGGCCGAGAAAGCCGACAAGGCCGACGCGAACGCGAAG
CCGGCCGCCGCGGCCCAGCCCGGCGCGAAACCGGCGCCGGCGGCTCCTGCGGCGCCGGCCCAGCCCGCCGCCGCGCCCGC
GAAGCCCGCCGCCGGGCAATCAGGAGCCCAGCGATGA

Upstream 100 bases:

>100_bases
CGCACCCGCGGCGTGGCCGGATCGCTCGTTCAGAACGAACCGCCGCGCCGTTTGCGCGTCTGAGCATTATTTAACCGATC
ACACGCGCCCGGCGCCGACC

Downstream 100 bases:

>100_bases
ACCGCCCGCAATACATCCTGCAGCCGGTCAATCCGTACTTCATCGTCTTCAGCCTCGCCGCCGCGTTCCTGCTGAACCTG
ATGCCATGGGGCCGCCTGCC

Product: rod shape-determining protein MreC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE
NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG
VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA
KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK
PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR

Sequences:

>Translated_358_residues
MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE
NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG
VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA
KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK
PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR
>Mature_358_residues
MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVPRDLFMGAADLAVTGAALRHE
NDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIATQSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDG
VIGQVTRVFPLQSEVTLVTDRDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA
KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGAKAAAKGEKAEKADKADANAK
PAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG1792

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Inner Membrane-Anchored [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreC family [H]

Homologues:

Organism=Escherichia coli, GI1789648, Length=259, Percent_Identity=33.976833976834, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007221
- InterPro:   IPR005223 [H]

Pfam domain/function: PF04085 MreC [H]

EC number: NA

Molecular weight: Translated: 37524; Mature: 37524

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDLFMGAADLAVTGAALRHENDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIAT
HHHHHCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHC
QSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDGVIGQVTRVFPLQSEVTLVTD
CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHEEECCCCEEEEEC
RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA
CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCHH
KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGA
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
KAAAKGEKAEKADKADANAKPAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR
HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEYSPPPLFKQGPPALARLIFFVALAIALLVSDARFSTLEIVRGVLGTVLYPLQRAALVP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RDLFMGAADLAVTGAALRHENDDLRKRNLQLSTQANQAAVLTQENAHLRAVLELRQHIAT
HHHHHCHHHHHHHHHHHHCCCHHHHHHCCEEECCCCCEEEEECCCCHHHHHHHHHHHHHC
QSTPVEIQYDTSDPFTQKIVVGQGSQQGIQDGSPVVSEDGVIGQVTRVFPLQSEVTLVTD
CCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEHHHHEEECCCCEEEEEC
RDLAIPVQVLRTGLRSVIYGTPKGDSLDLRFVPTSADLVAGDELITSGLDGVYPPGLPVA
CCCCCHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCCHH
KVVRVDKLADTAFARVTCAPVAAVRGARQMLVLHYRNDIPPRPAEPDPAAEKNAKGKKGA
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
KAAAKGEKAEKADKADANAKPAAAAQPGAKPAPAAPAAPAQPAAAPAKPAAGQSGAQR
HHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]