| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is yggG [C]
Identifier: 116691120
GI number: 116691120
Start: 3415205
End: 3416257
Strand: Direct
Name: yggG [C]
Synonym: Bcen2424_3102
Alternate gene names: 116691120
Gene position: 3415205-3416257 (Clockwise)
Preceding gene: 116691119
Following gene: 116691122
Centisome position: 98.03
GC content: 71.7
Gene sequence:
>1053_bases GTGCGCGGTAACCGCCTGCATCGTCTCGCACGCGTGACGGCTGCGTTGAGCGTCGGCGCCGCGGCATTCACCGCGACGAG TGCGCACGCGACCGACATCGGCGCGACGGCTGCGGGCTCCGCACCGGCCGCCGCGCAGGCGACGCCGCCCGCCCCCGCCA CGTCTGCCGCGCCCGTCCCGCCGTCCGCCGCCGAAGGCGCGCAGCCGACCGGCGCCGCGGTGCCGGCGAAGGCCTATACG CCGACGCCGCAGCAGGTCCGCTACGGCAACGCGATCGCGTTCCGCACGCTGATCCCGTCGCCGCTGCTCGAACAGCTCAC CGCGAACGAATACGCGCAGATCGTGCAGACGGCCGCCGACAGCAACCGCCTGCTGCCCGCGAACCAGCCGCGCGTGAAAC GCCTGCGCGCGATCGTCGCGAAGCTCGCGCCGTATTCGGTGAAGTGGAACGACCGCGTGAAAAGCTGGGCGTGGGACGTC AACGCGATCCGCTCGCGCGACATCCGCCTGACTTGCCTGCCGGGCGGCAAGGTGCTGGTGTACGGCGGCATGCTCGACCG CGTACGCCTGAACGACGACGAACTCGGCGTGCTGCTCGCGCACGGCATCGCGCATGCGCTGCGCGAACACGCGCGCAGCA ACTTCAGCGTGACCTCGCAGACGTCGCTGCGCGCGGCCGCGCTGCCGCCGCTGTTCGGCGTCGGCGATCCGCTGCCGCAG GCGCTGAATCTCGGCGAGCGTCTGCAGTCGCTCCACTACGATCCGACCGACGAAACCGAAGCCGACGTGATCGGCGGCGA CATCGCCGCACGCGCGGGCTTCGATCCGCGCGCGGCGATCACGCTGTGGGACAAGCTCGCGGTCGCGACGCGCGCGAACA AGGCGTCGGGCTTCATCTACACGCACCCGTACAGCGCCGCGCGCCGCCAGGATCTGCTGAACCGGCTGCCGGACCTGATG CCGCTGTACGCGAAGGCGACGGGCAAACGCGTCGAATCGCTGCCCGACTATGCGGGCATCAGCGCGCAGCGGCGCAAGAT CGTGCGGCGCTGA
Upstream 100 bases:
>100_bases GACTATTTCATCGTGTGCACCGCGCTCGCGGTTCCCGGCATGCTGCTGCTGTTCAGGATCGCGCCATGGAACGGTGCCGC GCGCGACGGCGAGGCGAGCC
Downstream 100 bases:
>100_bases GCCGCCGCGCGAGACCCGGGACGCTATGCGTCCGCGTCGGCCATCGCCGGGCGCACCCCGCTGTCACGCATCCAGCGCAC ATCATCCGCGGGGCTGCGGC
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: M48 Family Peptidase; Lipoprotein; Zn-Dependent Protease With Chaperone Function; Zn-Dependent Protease; Peptidase M; HtpX Protein; Exported Peptidase; Membrane-Associated Zinc Metalloprotease Peptidase; Zinc Metallopeptidase; Peptidase Family; Signal Peptide; Peptidase Protein; M48 Family Metalloprotease; Zn-Dependent Protease With Chaperone Function Protein; Signal Peptide Protein; Peptidase Family M; M48 Family Zinc Metallopeptidase; Zinc Metalloprotease; M48-Family Peptidase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRGNRLHRLARVTAALSVGAAAFTATSAHATDIGATAAGSAPAAAQATPPAPATSAAPVPPSAAEGAQPTGAAVPAKAYT PTPQQVRYGNAIAFRTLIPSPLLEQLTANEYAQIVQTAADSNRLLPANQPRVKRLRAIVAKLAPYSVKWNDRVKSWAWDV NAIRSRDIRLTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNFSVTSQTSLRAAALPPLFGVGDPLPQ ALNLGERLQSLHYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRANKASGFIYTHPYSAARRQDLLNRLPDLM PLYAKATGKRVESLPDYAGISAQRRKIVRR
Sequences:
>Translated_350_residues MRGNRLHRLARVTAALSVGAAAFTATSAHATDIGATAAGSAPAAAQATPPAPATSAAPVPPSAAEGAQPTGAAVPAKAYT PTPQQVRYGNAIAFRTLIPSPLLEQLTANEYAQIVQTAADSNRLLPANQPRVKRLRAIVAKLAPYSVKWNDRVKSWAWDV NAIRSRDIRLTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNFSVTSQTSLRAAALPPLFGVGDPLPQ ALNLGERLQSLHYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRANKASGFIYTHPYSAARRQDLLNRLPDLM PLYAKATGKRVESLPDYAGISAQRRKIVRR >Mature_350_residues MRGNRLHRLARVTAALSVGAAAFTATSAHATDIGATAAGSAPAAAQATPPAPATSAAPVPPSAAEGAQPTGAAVPAKAYT PTPQQVRYGNAIAFRTLIPSPLLEQLTANEYAQIVQTAADSNRLLPANQPRVKRLRAIVAKLAPYSVKWNDRVKSWAWDV NAIRSRDIRLTCLPGGKVLVYGGMLDRVRLNDDELGVLLAHGIAHALREHARSNFSVTSQTSLRAAALPPLFGVGDPLPQ ALNLGERLQSLHYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRANKASGFIYTHPYSAARRQDLLNRLPDLM PLYAKATGKRVESLPDYAGISAQRRKIVRR
Specific function: Seems To Regulate The Expression Of Speb. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082185, Length=194, Percent_Identity=25.7731958762887, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322940, Length=235, Percent_Identity=26.3829787234043, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.24.- [C]
Molecular weight: Translated: 37300; Mature: 37300
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNRLHRLARVTAALSVGAAAFTATSAHATDIGATAAGSAPAAAQATPPAPATSAAPVP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSAAEGAQPTGAAVPAKAYTPTPQQVRYGNAIAFRTLIPSPLLEQLTANEYAQIVQTAAD CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHC SNRLLPANQPRVKRLRAIVAKLAPYSVKWNDRVKSWAWDVNAIRSRDIRLTCLPGGKVLV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHCCCCEEEEEECCCCEEE YGGMLDRVRLNDDELGVLLAHGIAHALREHARSNFSVTSQTSLRAAALPPLFGVGDPLPQ ECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHH ALNLGERLQSLHYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRANKASGFIY HHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE THPYSAARRQDLLNRLPDLMPLYAKATGKRVESLPDYAGISAQRRKIVRR ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC >Mature Secondary Structure MRGNRLHRLARVTAALSVGAAAFTATSAHATDIGATAAGSAPAAAQATPPAPATSAAPVP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSAAEGAQPTGAAVPAKAYTPTPQQVRYGNAIAFRTLIPSPLLEQLTANEYAQIVQTAAD CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHC SNRLLPANQPRVKRLRAIVAKLAPYSVKWNDRVKSWAWDVNAIRSRDIRLTCLPGGKVLV CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHCCCCEEEEEECCCCEEE YGGMLDRVRLNDDELGVLLAHGIAHALREHARSNFSVTSQTSLRAAALPPLFGVGDPLPQ ECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHH ALNLGERLQSLHYDPTDETEADVIGGDIAARAGFDPRAAITLWDKLAVATRANKASGFIY HHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE THPYSAARRQDLLNRLPDLMPLYAKATGKRVESLPDYAGISAQRRKIVRR ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA