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The map label for this gene is regB [H]

Identifier: 116691112

GI number: 116691112

Start: 3407316

End: 3408746

Strand: Reverse

Name: regB [H]

Synonym: Bcen2424_3094

Alternate gene names: 116691112

Gene position: 3408746-3407316 (Counterclockwise)

Preceding gene: 116691113

Following gene: 116691111

Centisome position: 97.84

GC content: 71.63

Gene sequence:

>1431_bases
ATGCAACGAATCACCACCACCGGGCGCGTCAACCTCGGTCACCTGTTCTGGCTCCGCAATCTCGCGATCATCGGCCAGCT
CGTGACGATCGGCGTCGTGCAGACCTATTTCGGCGTGCATCTGCCGTTGCCCGCGATGCTGATGGTCATCGCGCTCGAAA
TCGTTTTCAACGCGCTGACCTGGGTGCGCGTGCTGCGCGCGCGGCCCGAGACCAATTTCGAGCTGCTCGGCCAGCTGTGG
GTCGACCTCGGTGCGCTGTCCGCGCTGCTGTTCCTGTCGGGCGGGACGACCAACCCGTTCGTGTCGCTGTACCTGCCGTC
GCTCGCGATCGCGGCGGCCGTGCTGCCGTGGCACCTGATGATCTGGCTCGCGGCGTTCGCGGTCGCCTGCTACGCGGCGC
TCGGCTTCGATTCGGTGCCGCTCAACATGGACAACCCGGCGAACCTGTTCGATTACTACCGTACCGGCATGTGGGTGAAC
TTCATGGTCAGCGTCGGGCTGATCGCGTGGTTCGTCGCGCGCATGTCGAACGCGCTGCGCCAGCGCGACGCGGCGCTCGG
CGAGGCGCAGGCGCATCTGCTGCGCGACGAGCGGGCCGTCGCGCTCGGCGTGCAGGCCGCCACCGTCGCGCATGAAATGG
GCACGCCGCTGTCGACGATCGCGATGCTCGCCGAGGAATTGCGCGACGCGGCGCGCTCCGATCCGGGGCTCGCGCGCTAC
GACGCCGACCTGAAGGTGCTCGAGGAACAGATGACGCTCTGCACGTCGGCGCTCGCGCGCCTGCGCAGCCGCGCGAGCAC
GTCGGCGAGCCGCCAGCCGGTGGACGACTGGCTCGACACGTTCGTCGAGCACTGGCGCCTGCGGCATCCGCACGTGCAGT
TCGAGCTGCTCGGCGCGCGCCCGGCCGGCGTCGCGCTCGACGATACGGTCGCGGCCGGCCAGATCCTGACGATCCTGCTC
GACAACGCCGCGCGCGCGAGCCCGCAGCGCGTGACGCTCGCCGCGAAGGTCGCGCATGGCGGCACGGCCGACGAAATCGA
ATTCGAGGTATGCGACGACGGGCCCGGCATTCCGGCCGCGCTGCGCGAATCGCTCGGCGCGATGCCGGTCGACAGCACGC
AGGGCGGGCACGGCGTCGGCCTGTATCTCGCGTTCAGTGCGGCCGCGCGGCTCGGCGGCGAGATCGAACTGTCCGACGTC
ACGCCGCGCGCGGCGGGCGGCAACGGGCGGGCCGGCGGTGCGGCAAATGGCCACGCGGCGGCCGTATCGGGACAACGCGC
GGGATCGCGCACGGGTGCACGTGCAGCCGAACGGCCGGCCGGCGCGCCGGACAGCCGCCCGGCCGTCGCCGCGGCCGGGC
GCGGCACGCGGGCCGTGCTGCGCCTGCCGGTCGTGCGCGTCGCGATGCCGGCGGCCTCAACCAACACGTAG

Upstream 100 bases:

>100_bases
TGGCCGGCGCGGCCGGTTGATGGCGCCTCGCCGCGCCCGTTCGTGTGCATCGATCCGGCCCCGCTAGAGGCGCCGGGCGC
TAAACGGGTAAACTGCCCGG

Downstream 100 bases:

>100_bases
ACGGAGAAACCACATGAGCGAGAACAATTTCCTGGTGATCGACGACAACGAGGTGTTCGCGGGCACGCTCGCGCGCGGCC
TCGAGCGCCGCGGTTACGCG

Product: periplasmic sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MQRITTTGRVNLGHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDAALGEAQAHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARSDPGLARY
DADLKVLEEQMTLCTSALARLRSRASTSASRQPVDDWLDTFVEHWRLRHPHVQFELLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHGGTADEIEFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRAAGGNGRAGGAANGHAAAVSGQRAGSRTGARAAERPAGAPDSRPAVAAAGRGTRAVLRLPVVRVAMPAASTNT

Sequences:

>Translated_476_residues
MQRITTTGRVNLGHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDAALGEAQAHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARSDPGLARY
DADLKVLEEQMTLCTSALARLRSRASTSASRQPVDDWLDTFVEHWRLRHPHVQFELLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHGGTADEIEFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRAAGGNGRAGGAANGHAAAVSGQRAGSRTGARAAERPAGAPDSRPAVAAAGRGTRAVLRLPVVRVAMPAASTNT
>Mature_476_residues
MQRITTTGRVNLGHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDAALGEAQAHLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARSDPGLARY
DADLKVLEEQMTLCTSALARLRSRASTSASRQPVDDWLDTFVEHWRLRHPHVQFELLGARPAGVALDDTVAAGQILTILL
DNAARASPQRVTLAAKVAHGGTADEIEFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRAAGGNGRAGGAANGHAAAVSGQRAGSRTGARAAERPAGAPDSRPAVAAAGRGTRAVLRLPVVRVAMPAASTNT

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50453; Mature: 50453

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure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EECCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]