| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yghZ [H]
Identifier: 116691095
GI number: 116691095
Start: 3391922
End: 3392965
Strand: Reverse
Name: yghZ [H]
Synonym: Bcen2424_3077
Alternate gene names: 116691095
Gene position: 3392965-3391922 (Counterclockwise)
Preceding gene: 116691097
Following gene: 116691092
Centisome position: 97.39
GC content: 65.42
Gene sequence:
>1044_bases ATGGCCTACGAAGCAGCTTCCGAACGTTATGCCGGCATGCAATACCGCACTTGCGGCAAATCCGGGCTCAAACTGCCCGC CCTGTCGCTCGGACTGTGGCACAACTTCGGCGATTCGACGCCGATCTCGACGCAGCGCGAGATCCTGCGCACCGCATTCG ACCTCGGCATCAACCACTTCGACCTCGCGAACAACTACGGGCCGCCGTACGGTAGCGCCGAAATCAACTTCGGCCGGCTG CTGAAGGAGGATTTCCGCCCGTATCGCGACGAGCTGCTGATCTCGACGAAGGCCGGCTGGGACATGTGGCCGGGGCCATA CGGCAGCGGCGGCGGGTCGCGCAAGTACGTGCTCGCGAGCCTCGACCAGAGCCTGCAGCGGATGGGGCTCGACTACGTCG ACATCTTCTACTCGCACCGTTTCGACGCGCATACGCCGCTCGAGGAAACGGCGGGTGCGCTGGCGTCGGCCGTGCAGCAG GGCAAGGCGCTCTACATCGGCATTTCGTCGTATTCGGCCGCGAAGACGCGCGAGATGGCCGCGCTGCTCGCGCAATACAA GGTGCCGCTGCTGATTCACCAGCCGTCGTACAACATGCTGAACCGCTGGATCGAAGAGGATCTGCTCGGCACGCTCGACG ACGTCGGCGCGGGCAGCATCGCGTTCACGCCGCTCGCGCAGGGCCTGCTCACGTCGAAGTACCTGAACGGCGTGCCGGCC GACGCGCGCGTGAACAAGCCGGGCGGCGGCTCGCTGAAGGAGGATCACCTGAGCGCGGACAACCTCGAGCATGTGCGCAA GCTCAACGCGATCGCCGAACGGCGTGGGCAGAGCCTGGCGCAGATGGCGCTGGCGTGGGTGCTGCGTAACGGCCGCGTGA CGTCCGCGCTGATCGGCGCGAGCCGGGCGGAGCAGGTGCGCGAGAACGTCGGCGCGTTGCAGAACCTCGAATTCTCGGCG GAGGAACTCGCGGAGATCGATCGTTACGCGACCGAAGGCGGCATTAATTTGTGGGAAAAGCCGTCCACCGATCAGGCGAT CTGA
Upstream 100 bases:
>100_bases CTTTCGCTACCATAGTCGTCGTATGACTCCTTCGCCGCCGTCGCGTCATTGGCGCGGCCGGCGCGCGTCCCTTTCCCCGA TGTCCTGACGGAACAGACTC
Downstream 100 bases:
>100_bases GCGGAAGTCGATACGGCATGCGAAACATCGCGTGCCGGGTCCGACGCACACGCGGTACGTCGCATCGCTGCGGTGCAGCG ATGCGCGTCGCGCACGGCCG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQREILRTAFDLGINHFDLANNYGPPYGSAEINFGRL LKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQ GKALYIGISSYSAAKTREMAALLAQYKVPLLIHQPSYNMLNRWIEEDLLGTLDDVGAGSIAFTPLAQGLLTSKYLNGVPA DARVNKPGGGSLKEDHLSADNLEHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALQNLEFSA EELAEIDRYATEGGINLWEKPSTDQAI
Sequences:
>Translated_347_residues MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQREILRTAFDLGINHFDLANNYGPPYGSAEINFGRL LKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQ GKALYIGISSYSAAKTREMAALLAQYKVPLLIHQPSYNMLNRWIEEDLLGTLDDVGAGSIAFTPLAQGLLTSKYLNGVPA DARVNKPGGGSLKEDHLSADNLEHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALQNLEFSA EELAEIDRYATEGGINLWEKPSTDQAI >Mature_346_residues AYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQREILRTAFDLGINHFDLANNYGPPYGSAEINFGRLL KEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQG KALYIGISSYSAAKTREMAALLAQYKVPLLIHQPSYNMLNRWIEEDLLGTLDDVGAGSIAFTPLAQGLLTSKYLNGVPAD ARVNKPGGGSLKEDHLSADNLEHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALQNLEFSAE ELAEIDRYATEGGINLWEKPSTDQAI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=37.6543209876543, Blast_Score=200, Evalue=1e-51, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=37.3831775700935, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI27436964, Length=335, Percent_Identity=35.2238805970149, Blast_Score=194, Evalue=8e-50, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=36.3076923076923, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=36, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI27436971, Length=334, Percent_Identity=36.5269461077844, Blast_Score=185, Evalue=5e-47, Organism=Homo sapiens, GI41327764, Length=240, Percent_Identity=30.4166666666667, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI41152114, Length=212, Percent_Identity=30.188679245283, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI223718702, Length=216, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=66.9565217391304, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=33.9506172839506, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1788070, Length=282, Percent_Identity=33.6879432624113, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789199, Length=351, Percent_Identity=30.1994301994302, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1788081, Length=321, Percent_Identity=26.4797507788162, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI48994888, Length=324, Percent_Identity=25, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=334, Percent_Identity=27.8443113772455, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=288, Percent_Identity=28.125, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=26.3157894736842, Blast_Score=91, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=250, Percent_Identity=26.4, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=278, Percent_Identity=27.3381294964029, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI24640980, Length=339, Percent_Identity=27.4336283185841, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI45549126, Length=339, Percent_Identity=27.4336283185841, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24646155, Length=344, Percent_Identity=28.4883720930233, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646159, Length=322, Percent_Identity=24.223602484472, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38047; Mature: 37916
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQREILRTAFDLGINHF CCCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE DLANNYGPPYGSAEINFGRLLKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLAS ECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQGKALYIGISSYSAAKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH ALLAQYKVPLLIHQPSYNMLNRWIEEDLLGTLDDVGAGSIAFTPLAQGLLTSKYLNGVPA HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKEDHLSADNLEHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGA CCEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SRAEQVRENVGALQNLEFSAEELAEIDRYATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQREILRTAFDLGINHF CCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCE DLANNYGPPYGSAEINFGRLLKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLAS ECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQGKALYIGISSYSAAKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH ALLAQYKVPLLIHQPSYNMLNRWIEEDLLGTLDDVGAGSIAFTPLAQGLLTSKYLNGVPA HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKEDHLSADNLEHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGA CCEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SRAEQVRENVGALQNLEFSAEELAEIDRYATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]