| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691078
Identifier: 116691078
GI number: 116691078
Start: 3374476
End: 3375873
Strand: Reverse
Name: 116691078
Synonym: Bcen2424_3060
Alternate gene names: NA
Gene position: 3375873-3374476 (Counterclockwise)
Preceding gene: 116691079
Following gene: 116691077
Centisome position: 96.9
GC content: 78.11
Gene sequence:
>1398_bases ATGCGAATGCCCCAAGGTGAGCAGGCTCCGATCATGACCGGTATCGACTCCGTTGCGGCCGCGCTGCTGGCGAGCCGCCT CGACAGCCTGCTGACCGGCACCGTGTCGGCGCCCGCCGGCGGCGGCGCGACCGCGCAGGTCGGCACGCCGGGCGCCGGCG CGTCGTCCGCGCCGCCGGCCGGCAGCCCGCCCGCCGCGCCGCCGGCTTCCACGCAGACCGCGCTGTCCGAGGTCGGGCGC GTGCTCGATGCGATCTCGCGCTCGGGCGGCGATGCGACGCCGGCAATCGTCGGTCGGCTGCCGCTGCTGGCCGATCCCGC CGTGCTGCTCACCGATACGCCCGTGCCGGCGCGCGCGCCGGCTGCGTCCGGTCCCGCTGGGTCCGCCACGCCGGCTTCCG ATCAAGCGTCGTCCGCCGCGGCGACGCGGGCCGCGGCTGCGCCGTCGGTGGCCCCGCCCGTCGCGGCGCTGCGTGCGGCG CTGGCGCAGGCCGTGAGCGAAAGCGGCCTCTTCTACGAATCCCATCTCGCGCAGTGGCTGGCCGGCCAGCGTCCGCTCGC GGCGCTGCTGCGCGAGCCGCAGGCGCGCCTCGCGACCGCGCTCGCGCCGGCCGACCCGGACGCCGTCCCGCACGAATCGA CCGACTTGCTCGACGAACTGCTCGCGCAGCGTCCGTCGCTGCCGGCCGCCGCGCGGGGCACCGCGCAACCGCCCGCACCG GGCGGCGCGCCTGCGCGCGACCCTGCGCAGGCCGCCCCGGCGGCGGCCCGACCGGGCGCGTCGTTGCCGCCCGATCCGTC CGATCCACTGGCTACGCCCGCCGATACGCGCTGGACGCCTGCGCGTGCCGAACTGGCCGCCGCATCGTCCGATCCGCAGC CGCAACCGCTCGCGACCGTCCACCCGGCCGCGGTGCCGCTCGTGCGGCAGCAGCTCGATGCGCTCGCGACGGACCAGTTT CGCTGGACCGGCGAGGCATGGCCCGGCGCGCGGCTCGACTGGACGATCGAACCCGACGAGCCGGGCCACCGTGCGCCGCG CGGCGGCGGTGGCGACGACGCGGGCGACGGCATCGCGTGGCGCACGCGCCTGACGCTGACGCTGCCGTCGCTCGGCACGG TCGATGCCGAGCTGGTGCTGAACGGCGCGCAGCTCGTCGCGCGGCTGCGCGCGAACCCGACGGGCGCCGACCGTCTGACG CGCCACGAAGCCGCGCTGCGGCAGCGGCTCGAAGGCTCGGGGCTCAAGGTGGGCGGGCTGTCGATCCGCGCGGTCGACGA CGGGCCGGACGGCTTCGACCTGTTCGCCGCCCAGGCCGCCGCGGCCGCGTATGCGCGCGGCGCGGCGGGCGGCCCCGAGG CGCGGGTGCCGGGCGAGGATGACGAGGCGCTCCCATGA
Upstream 100 bases:
>100_bases CGGCGCCGCACGCGGCGCGCGCTGTTCCCGCGGGCGGCACCGGCGTGCCGCGCCCCGGATTCGCAACGATGTGTAGGGTC TGTTTGCATATGCAACGCGC
Downstream 100 bases:
>100_bases GCATGACGTCCCGCAAGCGCGCGGCCGCCCTCGTCTACGACCCGAAAGGCGGCGATGCGGCGCCGCGCGTGGTCGCGAAG GGCTACGGCGTGCTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MRMPQGEQAPIMTGIDSVAAALLASRLDSLLTGTVSAPAGGGATAQVGTPGAGASSAPPAGSPPAAPPASTQTALSEVGR VLDAISRSGGDATPAIVGRLPLLADPAVLLTDTPVPARAPAASGPAGSATPASDQASSAAATRAAAAPSVAPPVAALRAA LAQAVSESGLFYESHLAQWLAGQRPLAALLREPQARLATALAPADPDAVPHESTDLLDELLAQRPSLPAAARGTAQPPAP GGAPARDPAQAAPAAARPGASLPPDPSDPLATPADTRWTPARAELAAASSDPQPQPLATVHPAAVPLVRQQLDALATDQF RWTGEAWPGARLDWTIEPDEPGHRAPRGGGGDDAGDGIAWRTRLTLTLPSLGTVDAELVLNGAQLVARLRANPTGADRLT RHEAALRQRLEGSGLKVGGLSIRAVDDGPDGFDLFAAQAAAAAYARGAAGGPEARVPGEDDEALP
Sequences:
>Translated_465_residues MRMPQGEQAPIMTGIDSVAAALLASRLDSLLTGTVSAPAGGGATAQVGTPGAGASSAPPAGSPPAAPPASTQTALSEVGR VLDAISRSGGDATPAIVGRLPLLADPAVLLTDTPVPARAPAASGPAGSATPASDQASSAAATRAAAAPSVAPPVAALRAA LAQAVSESGLFYESHLAQWLAGQRPLAALLREPQARLATALAPADPDAVPHESTDLLDELLAQRPSLPAAARGTAQPPAP GGAPARDPAQAAPAAARPGASLPPDPSDPLATPADTRWTPARAELAAASSDPQPQPLATVHPAAVPLVRQQLDALATDQF RWTGEAWPGARLDWTIEPDEPGHRAPRGGGGDDAGDGIAWRTRLTLTLPSLGTVDAELVLNGAQLVARLRANPTGADRLT RHEAALRQRLEGSGLKVGGLSIRAVDDGPDGFDLFAAQAAAAAYARGAAGGPEARVPGEDDEALP >Mature_465_residues MRMPQGEQAPIMTGIDSVAAALLASRLDSLLTGTVSAPAGGGATAQVGTPGAGASSAPPAGSPPAAPPASTQTALSEVGR VLDAISRSGGDATPAIVGRLPLLADPAVLLTDTPVPARAPAASGPAGSATPASDQASSAAATRAAAAPSVAPPVAALRAA LAQAVSESGLFYESHLAQWLAGQRPLAALLREPQARLATALAPADPDAVPHESTDLLDELLAQRPSLPAAARGTAQPPAP GGAPARDPAQAAPAAARPGASLPPDPSDPLATPADTRWTPARAELAAASSDPQPQPLATVHPAAVPLVRQQLDALATDQF RWTGEAWPGARLDWTIEPDEPGHRAPRGGGGDDAGDGIAWRTRLTLTLPSLGTVDAELVLNGAQLVARLRANPTGADRLT RHEAALRQRLEGSGLKVGGLSIRAVDDGPDGFDLFAAQAAAAAYARGAAGGPEARVPGEDDEALP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46337; Mature: 46337
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMPQGEQAPIMTGIDSVAAALLASRLDSLLTGTVSAPAGGGATAQVGTPGAGASSAPPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC GSPPAAPPASTQTALSEVGRVLDAISRSGGDATPAIVGRLPLLADPAVLLTDTPVPARAP CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCEEEEECCCCCCCCC AASGPAGSATPASDQASSAAATRAAAAPSVAPPVAALRAALAQAVSESGLFYESHLAQWL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGQRPLAALLREPQARLATALAPADPDAVPHESTDLLDELLAQRPSLPAAARGTAQPPAP CCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GGAPARDPAQAAPAAARPGASLPPDPSDPLATPADTRWTPARAELAAASSDPQPQPLATV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC HPAAVPLVRQQLDALATDQFRWTGEAWPGARLDWTIEPDEPGHRAPRGGGGDDAGDGIAW CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEE RTRLTLTLPSLGTVDAELVLNGAQLVARLRANPTGADRLTRHEAALRQRLEGSGLKVGGL EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCE SIRAVDDGPDGFDLFAAQAAAAAYARGAAGGPEARVPGEDDEALP EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRMPQGEQAPIMTGIDSVAAALLASRLDSLLTGTVSAPAGGGATAQVGTPGAGASSAPPA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCC GSPPAAPPASTQTALSEVGRVLDAISRSGGDATPAIVGRLPLLADPAVLLTDTPVPARAP CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHCCCEEEEECCCCCCCCC AASGPAGSATPASDQASSAAATRAAAAPSVAPPVAALRAALAQAVSESGLFYESHLAQWL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH AGQRPLAALLREPQARLATALAPADPDAVPHESTDLLDELLAQRPSLPAAARGTAQPPAP CCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC GGAPARDPAQAAPAAARPGASLPPDPSDPLATPADTRWTPARAELAAASSDPQPQPLATV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC HPAAVPLVRQQLDALATDQFRWTGEAWPGARLDWTIEPDEPGHRAPRGGGGDDAGDGIAW CHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEE RTRLTLTLPSLGTVDAELVLNGAQLVARLRANPTGADRLTRHEAALRQRLEGSGLKVGGL EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCE SIRAVDDGPDGFDLFAAQAAAAAYARGAAGGPEARVPGEDDEALP EEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA