Click here to switch to the map view.

The map label for this gene is ybhP [H]

Identifier: 116691070

GI number: 116691070

Start: 3366421

End: 3367236

Strand: Direct

Name: ybhP [H]

Synonym: Bcen2424_3052

Alternate gene names: 116691070

Gene position: 3366421-3367236 (Clockwise)

Preceding gene: 116691069

Following gene: 116691071

Centisome position: 96.63

GC content: 71.81

Gene sequence:

>816_bases
ATGTCCGCCGACGCCCTGTCCCTGCCGTTCGCCGAGCCGCACGCCGCGCCCGACGAAATCACCGCCGTCAGCTGGAACCT
GCACAAGGGCCGCTCGCCGCTCGGCTTCACCGCGTGGAACGCGATGCGCGACTGGATGCAGTCGACCCACGCGGACGTGT
ATTTCCTGCAGGAAGCGATGGCGCGCCGCATGCCGCGCCCGATGCTCGCCCCGGGCTTCGGCGCGCCGATGGACGATACG
GTCGATGACGTGTGGCATTGCCAGGCCACCGAGATCGCGCAGGCGCTCGACTGGCAGATCGCGCTCGGGCCGAACGTGTT
CAAGCCGTCGTGGCGGCACGGCAACGCGATCCTGTCGCCGCATCCGCTCGACCTCGGCGGCCGCTGGGACATCTCCGCGC
ACCGCTTCGAGCGGCGCGGGCTGCTGGTCGCGCGTGCGACGCTGGCGGGCGCACGCCCGGTCACGCTGCTGTGCGCGCAC
CTCGCGCTCACGCGCGCCGCTCGCCTGCGCCAGATGCACTGGATCGCGCACTGGATCGTCCGCAATGCGGGCGACGGCCC
GCTGATGCTGGCCGGCGACTTCAACGACTGGCGCAACGACTCGGTCGCGCTGTTCGGCGAGATCGGGCTGTCCGAGGTCG
CGACGCTGCTCGGCGAGTCGGGCCGCACGTTCCCCGCGTTCTCGCCGGCGCTCGCGCTCGACAAGATGTTCGTGCGCGGG
CTGACGCCGCTCGAATGGCGCGCGCCGTCCGGCGAAGCCGCGTGGCTGTCGGACCACCTGCCGTACATCGCGCGCCTGCG
CCTCGATCCGCAGTAA

Upstream 100 bases:

>100_bases
TGGCGGTCGGCGGCGACGCCTGGACCGACTGGACGCTCGTCGAGCAGCATCCGCATCTCGTGTACCGCGTGCGCGCGCAC
GTCGCGAAGGACTGAGCGTC

Downstream 100 bases:

>100_bases
CGCCGCCGCCGAAACGCGTCGGCGCCGGCGCGACAACGCGCGGCCAATCACCGAAAGCTCGCTGAAAGAATGCGTTGCGC
CAAATCCGCGCAGCCGCCCG

Product: endonuclease/exonuclease/phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRDWMQSTHADVYFLQEAMARRMPRPMLAPGFGAPMDDT
VDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ

Sequences:

>Translated_271_residues
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRDWMQSTHADVYFLQEAMARRMPRPMLAPGFGAPMDDT
VDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAH
LALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
>Mature_270_residues
SADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRDWMQSTHADVYFLQEAMARRMPRPMLAPGFGAPMDDTV
DDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSPHPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHL
ALTRAARLRQMHWIAHWIVRNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRGL
TPLEWRAPSGEAAWLSDHLPYIARLRLDPQ

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=275, Percent_Identity=31.2727272727273, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 30077; Mature: 29946

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRDWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPMLAPGFGAPMDDTVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
HCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
CCCCEEECCCCCCHHHHHCCCEEEEEECCCC
>Mature Secondary Structure 
SADALSLPFAEPHAAPDEITAVSWNLHKGRSPLGFTAWNAMRDWMQSTHADVYFLQEAM
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ARRMPRPMLAPGFGAPMDDTVDDVWHCQATEIAQALDWQIALGPNVFKPSWRHGNAILSP
HHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCEEEECCCCCCCCCCCCCEECCC
HPLDLGGRWDISAHRFERRGLLVARATLAGARPVTLLCAHLALTRAARLRQMHWIAHWIV
CCCCCCCEECCHHHHHHHCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNAGDGPLMLAGDFNDWRNDSVALFGEIGLSEVATLLGESGRTFPAFSPALALDKMFVRG
HCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
LTPLEWRAPSGEAAWLSDHLPYIARLRLDPQ
CCCCEEECCCCCCHHHHHCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]