Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116691018

Identifier: 116691018

GI number: 116691018

Start: 3311484

End: 3313076

Strand: Direct

Name: 116691018

Synonym: Bcen2424_3000

Alternate gene names: NA

Gene position: 3311484-3313076 (Clockwise)

Preceding gene: 116691017

Following gene: 116691019

Centisome position: 95.05

GC content: 66.48

Gene sequence:

>1593_bases
ATGAAGAAGAAACTGATCTGCCTGCTGGTGGCCGGCGCGTTGCCGGGCATCGCGCTGGCCGGTTCGACATCCGCCGAAAT
CAAGGCGCTGCAGGCGCAGGTCGCGGCGCTGCAGAAACAGATGAAGGCGATGCAGGCGCAGCTCGCCGCGAAGCCGGGCG
GCGCGGGTGTCGTCGCGACGTCCGGCGCGAGCGGCGGTGCGGCCGGCGGCGGCAACGCCGTCGCGGTCGCTGCCGACCCG
GGTTCGCCGGATTACGGCCGCGCACGCGCGACGCTGACCAACGACGAGGTCAGCGAAATGAAGCAGCAGATCGCGAACCA
GCAACTGAAGGTCGACTCGCTGACCGACGCGGCCAACACCGGCCCGCTCGCCGGCCTGTCGGTGACCGGCTACATCGATC
CGACCTACATCTACAACCGCGCGGCCGGCACGTCGTCGTTCCTGTTCGCGAACCACGAGAACGCGTACAACTACTTCAAC
AGCACGTTCGGCGATCTCTACCTCGACATCAAGAAGACCTTCGGCGTCGGTCCGATGGCGCCGTCGGCCGAGATCACGTT
GATGCCGAACCGCGGCAACGGCATCACGCTGCTGCAGAACTCGCGCGGCTCGATCACCGACAACCTGCTGAACACGGCAG
TGATCAACGTGCCGATCACCGCGGAAACGACGCTGGTCGCCGGCCTGATCCCGAGCTTCGGCGGCTACGAAGTGCAGCAG
TCGAACCAGATGCTCACGCTCACGCACAACCTGCTGTACGATTTCTCCGATCCGGGCAGCTACGTCGGTATCGGCGCGAA
CTACACGAAGGGCGCCTGGGCGTGGAAGTTCTTCCTCGGCAACGAGCAGTACCGCACCTACGGTTCGGTCACGCAGACGG
GCACCAATGCGCTCGGCGACCCGATCACCACCAGCAACAAGGTGCCGACCTTCACCGCGCGCGCCGACTACACGTGGTCG
AGCGCGCTCGATCTCGGCGGGTCGTTCAACATCGGGCGGCAAACGCTGGCGAGCGCGATCGACCCGACCACTGGCGCCGT
CAGCTACGGTCCGGGCGGCGCGGCGCCAAGCGCGTACGGCTCGTTCTTCTTCGGCGAACTCGACGCGACCTACACGCTCG
CCGACATTCAGTACAACGCCGAAGTCGACTACGGCCGGCAGCAGCATGCGGCGTTCAACGGCGGCCTCGCGCAGTGGTAC
GGGCTGTCGCTGCTCGCGCACCGCAAGTTCAACGCGCCGGTGGTCGGCCGCATGGGCGTGACGCTGCGCTACGACCTGCT
CGCGAACTCGAAGAACGGCGGGGGCGGCGGCGGTATCGCGCTGAACGGCAACGGGATGGACCCGAGCAACGGCTTCGGCG
TCGACGCGGACTGCCTGGCGCAGTCGAAGGCCGGCGGCGGCCTGGGCTTCGAGTGCAAGGGCGCGGTGCGCCAGGACGTC
GCGCTCGACCTGCTGTTCTATCCGACCCAGCAGATCACCGTGAAGGTCGAATACCGGCACGACTGGGCGAACAACAAGGT
GTTCCTGCGCAACGACGGGTCGTACGGCAAGTCCAACGACCTGCTCGCGACGCAGTTCATCTATTCGTTCTGA

Upstream 100 bases:

>100_bases
TCGAGGATAACAAGCACTGCAGACAAGCAACACGCGCTGCCCCAGGCGGGGCGCGCGATTCGATCCCGATTTGACAGGCG
CACGACTAGGAGAATCCGCA

Downstream 100 bases:

>100_bases
TGCAGCACGCGCGGGGCGCCGTGCCTCACGCACGGCGTCCCGCGCCGTTTTCAGGGTGGCTGCGCGCAGGGTGCAGCCTT
GTCGAGGGAGTCGGTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MKKKLICLLVAGALPGIALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAKPGGAGVVATSGASGGAAGGGNAVAVAADP
GSPDYGRARATLTNDEVSEMKQQIANQQLKVDSLTDAANTGPLAGLSVTGYIDPTYIYNRAAGTSSFLFANHENAYNYFN
STFGDLYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPITAETTLVAGLIPSFGGYEVQQ
SNQMLTLTHNLLYDFSDPGSYVGIGANYTKGAWAWKFFLGNEQYRTYGSVTQTGTNALGDPITTSNKVPTFTARADYTWS
SALDLGGSFNIGRQTLASAIDPTTGAVSYGPGGAAPSAYGSFFFGELDATYTLADIQYNAEVDYGRQQHAAFNGGLAQWY
GLSLLAHRKFNAPVVGRMGVTLRYDLLANSKNGGGGGGIALNGNGMDPSNGFGVDADCLAQSKAGGGLGFECKGAVRQDV
ALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF

Sequences:

>Translated_530_residues
MKKKLICLLVAGALPGIALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAKPGGAGVVATSGASGGAAGGGNAVAVAADP
GSPDYGRARATLTNDEVSEMKQQIANQQLKVDSLTDAANTGPLAGLSVTGYIDPTYIYNRAAGTSSFLFANHENAYNYFN
STFGDLYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPITAETTLVAGLIPSFGGYEVQQ
SNQMLTLTHNLLYDFSDPGSYVGIGANYTKGAWAWKFFLGNEQYRTYGSVTQTGTNALGDPITTSNKVPTFTARADYTWS
SALDLGGSFNIGRQTLASAIDPTTGAVSYGPGGAAPSAYGSFFFGELDATYTLADIQYNAEVDYGRQQHAAFNGGLAQWY
GLSLLAHRKFNAPVVGRMGVTLRYDLLANSKNGGGGGGIALNGNGMDPSNGFGVDADCLAQSKAGGGLGFECKGAVRQDV
ALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF
>Mature_530_residues
MKKKLICLLVAGALPGIALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAKPGGAGVVATSGASGGAAGGGNAVAVAADP
GSPDYGRARATLTNDEVSEMKQQIANQQLKVDSLTDAANTGPLAGLSVTGYIDPTYIYNRAAGTSSFLFANHENAYNYFN
STFGDLYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPITAETTLVAGLIPSFGGYEVQQ
SNQMLTLTHNLLYDFSDPGSYVGIGANYTKGAWAWKFFLGNEQYRTYGSVTQTGTNALGDPITTSNKVPTFTARADYTWS
SALDLGGSFNIGRQTLASAIDPTTGAVSYGPGGAAPSAYGSFFFGELDATYTLADIQYNAEVDYGRQQHAAFNGGLAQWY
GLSLLAHRKFNAPVVGRMGVTLRYDLLANSKNGGGGGGIALNGNGMDPSNGFGVDADCLAQSKAGGGLGFECKGAVRQDV
ALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55586; Mature: 55586

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLICLLVAGALPGIALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAKPGGAGVVAT
CCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
SGASGGAAGGGNAVAVAADPGSPDYGRARATLTNDEVSEMKQQIANQQLKVDSLTDAANT
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEEECCCCCCCC
GPLAGLSVTGYIDPTYIYNRAAGTSSFLFANHENAYNYFNSTFGDLYLDIKKTFGVGPMA
CCCCCEEEEEEECCHHEEECCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEHHCCCCCCC
PSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPITAETTLVAGLIPSFGGYEVQQ
CCCEEEEEECCCCCEEEEECCCCCHHHHHHCEEEEEEECCCCHHHHHHHCCCCCCEEEEC
SNQMLTLTHNLLYDFSDPGSYVGIGANYTKGAWAWKFFLGNEQYRTYGSVTQTGTNALGD
CCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCCCCCC
PITTSNKVPTFTARADYTWSSALDLGGSFNIGRQTLASAIDPTTGAVSYGPGGAAPSAYG
CCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCHHC
SFFFGELDATYTLADIQYNAEVDYGRQQHAAFNGGLAQWYGLSLLAHRKFNAPVVGRMGV
CEEEECCCCEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHEEEECCCCCCEEECCCC
TLRYDLLANSKNGGGGGGIALNGNGMDPSNGFGVDADCLAQSKAGGGLGFECKGAVRQDV
EEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCE
ALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF
EEEEEEECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEHHHHCC
>Mature Secondary Structure
MKKKLICLLVAGALPGIALAGSTSAEIKALQAQVAALQKQMKAMQAQLAAKPGGAGVVAT
CCCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
SGASGGAAGGGNAVAVAADPGSPDYGRARATLTNDEVSEMKQQIANQQLKVDSLTDAANT
CCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEEECCCCCCCC
GPLAGLSVTGYIDPTYIYNRAAGTSSFLFANHENAYNYFNSTFGDLYLDIKKTFGVGPMA
CCCCCEEEEEEECCHHEEECCCCCCEEEEECCCCHHHHHHCCCCEEEEEEEHHCCCCCCC
PSAEITLMPNRGNGITLLQNSRGSITDNLLNTAVINVPITAETTLVAGLIPSFGGYEVQQ
CCCEEEEEECCCCCEEEEECCCCCHHHHHHCEEEEEEECCCCHHHHHHHCCCCCCEEEEC
SNQMLTLTHNLLYDFSDPGSYVGIGANYTKGAWAWKFFLGNEQYRTYGSVTQTGTNALGD
CCCEEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCCCCCC
PITTSNKVPTFTARADYTWSSALDLGGSFNIGRQTLASAIDPTTGAVSYGPGGAAPSAYG
CCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCHHHHHHHCCCCCCEEECCCCCCCCCHHC
SFFFGELDATYTLADIQYNAEVDYGRQQHAAFNGGLAQWYGLSLLAHRKFNAPVVGRMGV
CEEEECCCCEEEEEEEEEECCCCCCCHHHHHCCCCHHHHHHHHEEEECCCCCCEEECCCC
TLRYDLLANSKNGGGGGGIALNGNGMDPSNGFGVDADCLAQSKAGGGLGFECKGAVRQDV
EEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCCCCCCE
ALDLLFYPTQQITVKVEYRHDWANNKVFLRNDGSYGKSNDLLATQFIYSF
EEEEEEECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA