| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is efeU [H]
Identifier: 116691005
GI number: 116691005
Start: 3298548
End: 3299384
Strand: Reverse
Name: efeU [H]
Synonym: Bcen2424_2987
Alternate gene names: 116691005
Gene position: 3299384-3298548 (Counterclockwise)
Preceding gene: 116691006
Following gene: 116690995
Centisome position: 94.7
GC content: 70.97
Gene sequence:
>837_bases ATGCTGTCTACCGCCCTGATCGTCTTTCGTGAAGTGCTCGAGGCCGCGCTGGTGGTCTCGATCGTGATGGCCGCCACGAA GGGCGTGCCGCGGCGCGGCTGGTGGGTGGGCGGCGGGCTGGTCGGCGGCGTGGTCGGCGCCGGCCTGATCGCGGCGTTCG CCGACGTGATCTCGCAATGGGCTTCGGGCATGGGCCAGGAAGTCTTCAACGCGGGCGTGATGTTCGTCGCGACGCTGATG CTCGCGTGGCATTGCATCTGGATGAGCCGGCACGGCCGCGAAATGGCGCTGCACATGGGCGAGGTCGGCCGGGCGGTCGC CGCCGGCCGCCGGCCGCTGACCGGGCTCGCGATCGTGGTCGGCGTCGCGGTATTGCGCGAAGGCTCCGAGGCCGTGCTGT TCCTGTACGGGATCGCGGCGGGCGATCCGGGCCAGACGCCGCAGATGATCGTCGGCGGGCTGCTCGGCGTGTTCGGCGGG GCGGGGCTCGGCTACGCGATGTATGCGGGCCTGCTGCAGATTCCGTTGAAGCGCCTGTTCTCCGTCACCAACGCGCTGAT CGTGCTGCTCGCCGCGGGCATGGCGAGCCAGTGCGTCGGCTTCCTGCTGGCGGCCGGCCTCGTGCCGTCGTGGGGCGATG CGGTCTGGGACACGTCGTGGCTGCTCAAGGAATCGAGCATCGTCGGCAAGGCGCTGCACACGCTGATCGGCTATACCGCG CGGCCGGCGGGCATCCAGATCGCCGCGTACGTCGCGACGCTCGTGGCGATCGTCGTGCTGACACGGCTCGTCGGCCGGCC GCAGCAGACGCTGAGGCCGCCGCACGCCGCTGCGTGA
Upstream 100 bases:
>100_bases CCTGGTCGGGCCGCTGAAGGCGGGGACCTACGAGTTCCACGACGAGTATCACGAAGCGCAGTCGAAGACGCACCTGACCG TCAAGTAAGCCGATACCGAC
Downstream 100 bases:
>100_bases GTGGAGTGTTGCCGGGTTTCCGGGTTCGAATGAAAGAAGGGGCGTCATGGACGCCCCTTCTTTCATTTGCGGTGCGTGAC GCGCCTGCGCTCGCTCAGCT
Product: iron permease FTR1
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLSTALIVFREVLEAALVVSIVMAATKGVPRRGWWVGGGLVGGVVGAGLIAAFADVISQWASGMGQEVFNAGVMFVATLM LAWHCIWMSRHGREMALHMGEVGRAVAAGRRPLTGLAIVVGVAVLREGSEAVLFLYGIAAGDPGQTPQMIVGGLLGVFGG AGLGYAMYAGLLQIPLKRLFSVTNALIVLLAAGMASQCVGFLLAAGLVPSWGDAVWDTSWLLKESSIVGKALHTLIGYTA RPAGIQIAAYVATLVAIVVLTRLVGRPQQTLRPPHAAA
Sequences:
>Translated_278_residues MLSTALIVFREVLEAALVVSIVMAATKGVPRRGWWVGGGLVGGVVGAGLIAAFADVISQWASGMGQEVFNAGVMFVATLM LAWHCIWMSRHGREMALHMGEVGRAVAAGRRPLTGLAIVVGVAVLREGSEAVLFLYGIAAGDPGQTPQMIVGGLLGVFGG AGLGYAMYAGLLQIPLKRLFSVTNALIVLLAAGMASQCVGFLLAAGLVPSWGDAVWDTSWLLKESSIVGKALHTLIGYTA RPAGIQIAAYVATLVAIVVLTRLVGRPQQTLRPPHAAA >Mature_278_residues MLSTALIVFREVLEAALVVSIVMAATKGVPRRGWWVGGGLVGGVVGAGLIAAFADVISQWASGMGQEVFNAGVMFVATLM LAWHCIWMSRHGREMALHMGEVGRAVAAGRRPLTGLAIVVGVAVLREGSEAVLFLYGIAAGDPGQTPQMIVGGLLGVFGG AGLGYAMYAGLLQIPLKRLFSVTNALIVLLAAGMASQCVGFLLAAGLVPSWGDAVWDTSWLLKESSIVGKALHTLIGYTA RPAGIQIAAYVATLVAIVVLTRLVGRPQQTLRPPHAAA
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 28822; Mature: 28822
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSTALIVFREVLEAALVVSIVMAATKGVPRRGWWVGGGLVGGVVGAGLIAAFADVISQW CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH ASGMGQEVFNAGVMFVATLMLAWHCIWMSRHGREMALHMGEVGRAVAAGRRPLTGLAIVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH GVAVLREGSEAVLFLYGIAAGDPGQTPQMIVGGLLGVFGGAGLGYAMYAGLLQIPLKRLF HHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SVTNALIVLLAAGMASQCVGFLLAAGLVPSWGDAVWDTSWLLKESSIVGKALHTLIGYTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPAGIQIAAYVATLVAIVVLTRLVGRPQQTLRPPHAAA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure MLSTALIVFREVLEAALVVSIVMAATKGVPRRGWWVGGGLVGGVVGAGLIAAFADVISQW CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH ASGMGQEVFNAGVMFVATLMLAWHCIWMSRHGREMALHMGEVGRAVAAGRRPLTGLAIVV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH GVAVLREGSEAVLFLYGIAAGDPGQTPQMIVGGLLGVFGGAGLGYAMYAGLLQIPLKRLF HHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SVTNALIVLLAAGMASQCVGFLLAAGLVPSWGDAVWDTSWLLKESSIVGKALHTLIGYTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPAGIQIAAYVATLVAIVVLTRLVGRPQQTLRPPHAAA CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA