| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116691001
Identifier: 116691001
GI number: 116691001
Start: 3297021
End: 3297386
Strand: Direct
Name: 116691001
Synonym: Bcen2424_2983
Alternate gene names: NA
Gene position: 3297021-3297386 (Clockwise)
Preceding gene: 116691000
Following gene: 116691002
Centisome position: 94.64
GC content: 62.57
Gene sequence:
>366_bases ATGTCTGCTTCCGTACGACGCGTCTTCAAGACGAAGTGGTTTCACAAGGCAGCCGGGAAAGCGGGAATCGCCGATGGCGA ACTCTGCCGCGCGGTGCGGGAACTGGCCCGCGGCCAGGGCGTCGATCTCGGCGGCAACGTCTGGAAAAAGCGCCTCGACG GCAATCGGCAGCGCGGGATCGTGCTGGGCAAGGTCGGGCACACGTGGGTGTTCGTGTTCCTGTTCGCGAAATGCGACCGC GACAACATCGACGCATGCGAACTGCGCGCGTTCAGAAAGCTCGCCGCGGACGTGGGTCGACACACCGACAGCGACATCGC GACGCTGGTCGCACTGAAAGAGCTTGTGGAGATTTGCAATGGCTAA
Upstream 100 bases:
>100_bases CCCTCCCGACCGCTTGCGGGTGTGAGGCAGGCCGTTTGGCCAGGTCGAAATATGTACCACGTAGTGGTATATAATCCTGT GCTAACTCGACCGGCTCGAC
Downstream 100 bases:
>100_bases GAGTCGATTCAAGAGCGATGCGACGGAGGCGATCCACAGCGCCGCGTCCGGCCTGTATCGTGCGCAACTGATCGACAAGA AGACGATGCGGGAATACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSASVRRVFKTKWFHKAAGKAGIADGELCRAVRELARGQGVDLGGNVWKKRLDGNRQRGIVLGKVGHTWVFVFLFAKCDR DNIDACELRAFRKLAADVGRHTDSDIATLVALKELVEICNG
Sequences:
>Translated_121_residues MSASVRRVFKTKWFHKAAGKAGIADGELCRAVRELARGQGVDLGGNVWKKRLDGNRQRGIVLGKVGHTWVFVFLFAKCDR DNIDACELRAFRKLAADVGRHTDSDIATLVALKELVEICNG >Mature_120_residues SASVRRVFKTKWFHKAAGKAGIADGELCRAVRELARGQGVDLGGNVWKKRLDGNRQRGIVLGKVGHTWVFVFLFAKCDRD NIDACELRAFRKLAADVGRHTDSDIATLVALKELVEICNG
Specific function: Unknown
COG id: COG4737
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13368; Mature: 13236
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASVRRVFKTKWFHKAAGKAGIADGELCRAVRELARGQGVDLGGNVWKKRLDGNRQRGI CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCE VLGKVGHTWVFVFLFAKCDRDNIDACELRAFRKLAADVGRHTDSDIATLVALKELVEICN EEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure SASVRRVFKTKWFHKAAGKAGIADGELCRAVRELARGQGVDLGGNVWKKRLDGNRQRGI CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCE VLGKVGHTWVFVFLFAKCDRDNIDACELRAFRKLAADVGRHTDSDIATLVALKELVEICN EEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA