| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690979
Identifier: 116690979
GI number: 116690979
Start: 3273755
End: 3273961
Strand: Direct
Name: 116690979
Synonym: Bcen2424_2961
Alternate gene names: NA
Gene position: 3273755-3273961 (Clockwise)
Preceding gene: 116690978
Following gene: 116690981
Centisome position: 93.97
GC content: 72.46
Gene sequence:
>207_bases ATGAGCGACGTGACGATGCCGGTCGCCACGGTCGCGTCGCCGTGCACCGACGTCTGCCGGATCGATCCGCGCACCGACTG GTGCGCGGGCTGCCTGCGCACGCGCGGAGAGATCAAGGGATGGCGTGAGTCGGACGACGACGCGAGGCGCGCGCTGCTCG CGCGGCTCGACGCGCGGCGGCGCCTGATCGCGGGCAGCGAGACATAA
Upstream 100 bases:
>100_bases CCGCCGCCGGCCATCCGCACGCGGTGTTCAACCTGTCGCCGCACGAGCTCGTGTCGCTGACGGGCGCGCCGGTCGCGGAC GTCGCGTTGCGGGAGTCCGC
Downstream 100 bases:
>100_bases AAAAAAGCCGTTCAACCTCACGGGCGAACGGCATCGAGATCGGAATCCTGTGAACGTGATCAACGTCACAGCCCGCATCA TACGAGCGACGCGACCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSDVTMPVATVASPCTDVCRIDPRTDWCAGCLRTRGEIKGWRESDDDARRALLARLDARRRLIAGSET
Sequences:
>Translated_68_residues MSDVTMPVATVASPCTDVCRIDPRTDWCAGCLRTRGEIKGWRESDDDARRALLARLDARRRLIAGSET >Mature_67_residues SDVTMPVATVASPCTDVCRIDPRTDWCAGCLRTRGEIKGWRESDDDARRALLARLDARRRLIAGSET
Specific function: Unknown
COG id: COG3313
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7565; Mature: 7433
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVTMPVATVASPCTDVCRIDPRTDWCAGCLRTRGEIKGWRESDDDARRALLARLDARR CCCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RLIAGSET HHHCCCCC >Mature Secondary Structure SDVTMPVATVASPCTDVCRIDPRTDWCAGCLRTRGEIKGWRESDDDARRALLARLDARR CCCCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH RLIAGSET HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA