| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690966
Identifier: 116690966
GI number: 116690966
Start: 3260719
End: 3260958
Strand: Reverse
Name: 116690966
Synonym: Bcen2424_2948
Alternate gene names: NA
Gene position: 3260958-3260719 (Counterclockwise)
Preceding gene: 116690967
Following gene: 116690965
Centisome position: 93.6
GC content: 60.83
Gene sequence:
>240_bases ATGGAGCTCATCATGCAAGTTGCCACTGTCCCCGAAGCCACGCTCGATCTGCAGCGGCTTCTCGATGCCGCGATTGCCGG CGAACGTGTCGTGATCACGCAGGCCGGCAAGCAGGCGGTCCGGCTCGTGCCGCTCAGGCCGATTCATCCATTCGGTGCCC TCGAGGGGCAGATGTGGATTGCGGATGATTTCGATGCACCGCTTTCCGTCGAAGAACTGGCCGCATTCATGGGGAAGTAA
Upstream 100 bases:
>100_bases GGCGTGATTCCGGACGCGACGACCAGCCAGTGTCCGAGCGGCTGGACGTTCGGCCTATTGGAGCAATGACGCGAATGTCG TAACAATGGTGGGTCACTCA
Downstream 100 bases:
>100_bases TGCGGTTGCTGTTCGATACGCACATCTTTCTCTGGGCAGTGGCGAACGATCCGAAACTGAGCGTTCGCGCGCGCAGTTTG ATCACCGCTGCCGATGAAGT
Product: prevent-host-death family protein
Products: NA
Alternate protein names: Prevent-Host-Death Family Protein
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MELIMQVATVPEATLDLQRLLDAAIAGERVVITQAGKQAVRLVPLRPIHPFGALEGQMWIADDFDAPLSVEELAAFMGK
Sequences:
>Translated_79_residues MELIMQVATVPEATLDLQRLLDAAIAGERVVITQAGKQAVRLVPLRPIHPFGALEGQMWIADDFDAPLSVEELAAFMGK >Mature_79_residues MELIMQVATVPEATLDLQRLLDAAIAGERVVITQAGKQAVRLVPLRPIHPFGALEGQMWIADDFDAPLSVEELAAFMGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8585; Mature: 8585
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELIMQVATVPEATLDLQRLLDAAIAGERVVITQAGKQAVRLVPLRPIHPFGALEGQMWI CCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE ADDFDAPLSVEELAAFMGK ECCCCCCCCHHHHHHHHCC >Mature Secondary Structure MELIMQVATVPEATLDLQRLLDAAIAGERVVITQAGKQAVRLVPLRPIHPFGALEGQMWI CCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCEEE ADDFDAPLSVEELAAFMGK ECCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA