| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690943
Identifier: 116690943
GI number: 116690943
Start: 3232944
End: 3234023
Strand: Reverse
Name: 116690943
Synonym: Bcen2424_2925
Alternate gene names: NA
Gene position: 3234023-3232944 (Counterclockwise)
Preceding gene: 116690953
Following gene: 116690936
Centisome position: 92.83
GC content: 69.54
Gene sequence:
>1080_bases ATGAACGCCCTGGAACACCAACTCGATTACCCCTTCGCCGATACGCTGCCCGCCGCGGGCGACACGTTCGAGGTCGCGCC CGGCGTGCGCTGGCTGCGCATGCCGCTGCCGTTTTCGCTCGACCACATCAATCTCTGGCTGCTGCGCGACGAGATCGACG GGCAGGCCGGCTGGACGGTGGTCGATTGCGGGATCGCGTCGGACGCGATCCGCACGCACTGGGAGCAGATCTTCGACACG CAGCTCGACGGCCTGCCCGTGCTGCGCGTGCTCGTCACGCACTGCCACCCCGATCACTTCGGCCTCGCGAACTGGCTGTG CGAAGGCGGCGACAAGGGCCGCTGGAACGTGCGGTTGTGGATGACGCTCGGCGAATATATGTTCGGCTGCCTGATGGCGG CCGGCAACGGTTCGAACGCGGGCGGCGCGGCCGCCGCCGATCACTTCGCGCGCCACGGGCTGACCGATCCGGCCGCGCTC GACAAGCTGCGCAACCGCCGCAGCTACTACGCGGATCTGGTGCCGGCCGTGCCGCCGCGCTACCGGCGCCTGCGCGAAGG CGACGCGGTGACGATCGGCGCGCGCACGTGGCGCGTCGTCACCGGCTTCGGCCATTCGCCTGAACATTGCGCGCTCTACA GCGAAGCGGACGGCGTGCTGATTTCCGGCGACATGGTGCTGCCGCGCATCTCGACGAACGTGTCGGTGTTCGACCTCGAA CCGGAAGCGAACCCGCTCGCGCTGTACCTCGAATCGCTCGGCCGCTACGAGACGATGGCGCCCGACACGCTCGTGCTGCC GTCGCACGGCAAGCCGTTCCGCGGCGTGCGCACACGCATCGCGCAACTGCGCGAACACCACGATGCGCGCCTGGCCGAGG TGCGCGTCGCGTGCGCGGAGCAGCCGATGAGCGCGGCCGATATCGTGCCGATCATGTTCCGCCGCCGCGAGCTCGATATC CACCAGATGACGTTCGCGCTCGGCGAGGCGCTCGCGCACCTGAACCTGCTGTGGCTCGCGGGCGAACTCGTGCGCGAGCA GGGCGACGACGGGGTGCTGCGGTTCCGTACCGCGGGCTGA
Upstream 100 bases:
>100_bases CCGGGCACGTCTTTCTCGCGACGGCGATAGAATCGACGCACCGCCCGCCGCGTGTGCCGCCGGCGCGCATTCGCACCGAT AACGACGAGACGCCCCACCG
Downstream 100 bases:
>100_bases GCGTTTTTCGTAGCGCTTACGCGACGGGTTCGTAACGCCATCCGTCGCGATGCCACTGCATCGTGTGCGTTGGTTCGAGC GCCGCGAGAAACGCGGCGTC
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Zinc Metallohydrolase; Beta-Lactamase Class B; Metallo-Dependent Enzymatic Protein; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTVVDCGIASDAIRTHWEQIFDT QLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAAL DKLRNRRSYYADLVPAVPPRYRRLREGDAVTIGARTWRVVTGFGHSPEHCALYSEADGVLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAEQPMSAADIVPIMFRRRELDI HQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG
Sequences:
>Translated_359_residues MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTVVDCGIASDAIRTHWEQIFDT QLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAAL DKLRNRRSYYADLVPAVPPRYRRLREGDAVTIGARTWRVVTGFGHSPEHCALYSEADGVLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAEQPMSAADIVPIMFRRRELDI HQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG >Mature_359_residues MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTVVDCGIASDAIRTHWEQIFDT QLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAAL DKLRNRRSYYADLVPAVPPRYRRLREGDAVTIGARTWRVVTGFGHSPEHCALYSEADGVLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAEQPMSAADIVPIMFRRRELDI HQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39902; Mature: 39902
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTV CCCHHHHCCCCCHHCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEE VDCGIASDAIRTHWEQIFDTQLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLW EECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEE MTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAALDKLRNRRSYYADLVPAVPPR EHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH YRRLREGDAVTIGARTWRVVTGFGHSPEHCALYSEADGVLISGDMVLPRISTNVSVFDLE HHHHCCCCEEEECCEEEEEEECCCCCCCCEEEEECCCCEEEECCEEECEECCCEEEEEEC PEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAE CCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QPMSAADIVPIMFRRRELDIHQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQAGWTV CCCHHHHCCCCCHHCCCCCCCCEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCEE VDCGIASDAIRTHWEQIFDTQLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLW EECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEE MTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAALDKLRNRRSYYADLVPAVPPR EHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH YRRLREGDAVTIGARTWRVVTGFGHSPEHCALYSEADGVLISGDMVLPRISTNVSVFDLE HHHHCCCCEEEECCEEEEEEECCCCCCCCEEEEECCCCEEEECCEEECEECCCEEEEEEC PEANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAE CCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC QPMSAADIVPIMFRRRELDIHQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA