| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690933
Identifier: 116690933
GI number: 116690933
Start: 3219797
End: 3220054
Strand: Direct
Name: 116690933
Synonym: Bcen2424_2915
Alternate gene names: NA
Gene position: 3219797-3220054 (Clockwise)
Preceding gene: 116690932
Following gene: 116690934
Centisome position: 92.42
GC content: 56.98
Gene sequence:
>258_bases ATGCAAATGATCTACAACAGCCCCAACTACTGCGTCGTCGAATTTGCGCCGCAGGCCGGCCATCACCTGATGAATGCCGG CGGATACGAAATCGTCGACAAGAACGCGCAGCGCGAAATCTTCATCGACGGCGAACTTGCCGAACGATTCCGCGCGCACG TGAAGCAGCTGATCGAGGATGAACCGTCGCTCGACGAGGTCGACGAATTCCTCGGACAATTCGACAGCCTGATGATGATG CCCGTCGTGCTCCACTGA
Upstream 100 bases:
>100_bases GGGAGAACGGGGTGTGCAGCGCAAGCCCCTTGAAACCGGCAAGGCTTGCCCCACCTAGGGGACAACAAGGCCAGATGCCA CTGCGAAGAGGAGTGCCGCC
Downstream 100 bases:
>100_bases CGAGCGCGGCCCGGCGCGTCACGCGGCCGGGCCATTCGCCGCGCATCGACGCGGCGCCGCGTGCACTCCGATCCTGCCCC CGTCCGGCTCGCCGGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MQMIYNSPNYCVVEFAPQAGHHLMNAGGYEIVDKNAQREIFIDGELAERFRAHVKQLIEDEPSLDEVDEFLGQFDSLMMM PVVLH
Sequences:
>Translated_85_residues MQMIYNSPNYCVVEFAPQAGHHLMNAGGYEIVDKNAQREIFIDGELAERFRAHVKQLIEDEPSLDEVDEFLGQFDSLMMM PVVLH >Mature_85_residues MQMIYNSPNYCVVEFAPQAGHHLMNAGGYEIVDKNAQREIFIDGELAERFRAHVKQLIEDEPSLDEVDEFLGQFDSLMMM PVVLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9770; Mature: 9770
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMIYNSPNYCVVEFAPQAGHHLMNAGGYEIVDKNAQREIFIDGELAERFRAHVKQLIED CCCEECCCCEEEEEECCCCCCHHHCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCC EPSLDEVDEFLGQFDSLMMMPVVLH CCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQMIYNSPNYCVVEFAPQAGHHLMNAGGYEIVDKNAQREIFIDGELAERFRAHVKQLIED CCCEECCCCEEEEEECCCCCCHHHCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCC EPSLDEVDEFLGQFDSLMMMPVVLH CCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA