| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is coaX [H]
Identifier: 116690923
GI number: 116690923
Start: 3209919
End: 3210716
Strand: Direct
Name: coaX [H]
Synonym: Bcen2424_2905
Alternate gene names: 116690923
Gene position: 3209919-3210716 (Clockwise)
Preceding gene: 116690922
Following gene: 116690924
Centisome position: 92.14
GC content: 73.43
Gene sequence:
>798_bases ATGAGCGAACCGCACCTGCTGATCGATGCCGGCAACAGCCGGATCAAGTGGGCGCTCGCCGACGCGCGGCGCTCGCTCGT CGACACGGGCGCGTTCGGCCATACGCGCGACGGCGGCGCCGATCCCGACTGGTCGCACCTCCCGCGGCCGCGCGGCGCGT GGATCTCGAACGTCGCGGGCGCCGACGTAGCCGCACGGCTCGACGCGCTGCTCGACGCACGCTGGCCGGGCCTGCCGCGC ACGACGATCCGCGCGCGGCCCGTGCAATGCGGCGTGACGAACGGCTATACGACGCCCGAACAGCTCGGCAGCGACCGGTG GGCCGGCCTGATCGGCGCGCACGCGGCGTTTCCCGGCGAGCATCTGCTGATCGCGACGTTCGGCACCGCGACAACGCTCG AGGCATTGCGCGCGGACGGCCGCTTCACGGGCGGGCTGATCGCGCCGGGCTGGGCGCTGATGATGCGCGCGCTCGGCACG CACACCGCGCAGTTACCGACGCTGACCACGGATATCGCCAGCGGCCTGCTCGCGGGCGCGCAGGCCGAACCGTTCCAGAT CGATACGCCACGCTCGCTGTCGGCCGGCTGCCTGTACGCGCAGGCCGGCCTGATCGAACGCGCGTGGCGCGATCTCGTCG CGGCGTGGCAGGCGCCCGTGCGGCTCGTGTTGGCAGGCGGTGCGGCGGACGACGTCGCGCGTGCGCTGACGGTCGCGCAT ACGCGGCATGACGCGCTGATCCTGTCCGGGCTCGCGCTGATCGCAGCGGACGCCGCTCCGGCAACGGCGCAGGATTGA
Upstream 100 bases:
>100_bases GCATCGCGACGGGCATCGACGCGACCGGTCAGTTGCTGCTCGACACGCCGAACGGCATACAAACGATCGCGGCCGGCGAC GTGTCGCTGCGCGAAGCGCA
Downstream 100 bases:
>100_bases CGCAAAAGCGTCGGCATCGCGACGCAGGCCAAAGTGAGCCCGACCGGCCCACCTCACGCCGACGATGCACTACGCGCGGT GCCGCGCCAGCGGTCCGCAC
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSEPHLLIDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWSHLPRPRGAWISNVAGADVAARLDALLDARWPGLPR TTIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGT HTAQLPTLTTDIASGLLAGAQAEPFQIDTPRSLSAGCLYAQAGLIERAWRDLVAAWQAPVRLVLAGGAADDVARALTVAH TRHDALILSGLALIAADAAPATAQD
Sequences:
>Translated_265_residues MSEPHLLIDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWSHLPRPRGAWISNVAGADVAARLDALLDARWPGLPR TTIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGT HTAQLPTLTTDIASGLLAGAQAEPFQIDTPRSLSAGCLYAQAGLIERAWRDLVAAWQAPVRLVLAGGAADDVARALTVAH TRHDALILSGLALIAADAAPATAQD >Mature_264_residues SEPHLLIDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWSHLPRPRGAWISNVAGADVAARLDALLDARWPGLPRT TIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGTH TAQLPTLTTDIASGLLAGAQAEPFQIDTPRSLSAGCLYAQAGLIERAWRDLVAAWQAPVRLVLAGGAADDVARALTVAHT RHDALILSGLALIAADAAPATAQD
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004619 [H]
Pfam domain/function: PF03309 Bvg_acc_factor [H]
EC number: =2.7.1.33 [H]
Molecular weight: Translated: 27704; Mature: 27572
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPHLLIDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWSHLPRPRGAWISNVAG CCCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCC ADVAARLDALLDARWPGLPRTTIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGE CHHHHHHHHHHHCCCCCCCCCCEECCCEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCCC HLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGTHTAQLPTLTTDIASGLLAGA EEEEEECCCHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC QAEPFQIDTPRSLSAGCLYAQAGLIERAWRDLVAAWQAPVRLVLAGGAADDVARALTVAH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH TRHDALILSGLALIAADAAPATAQD HHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEPHLLIDAGNSRIKWALADARRSLVDTGAFGHTRDGGADPDWSHLPRPRGAWISNVAG CCCCEEEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHCCCC ADVAARLDALLDARWPGLPRTTIRARPVQCGVTNGYTTPEQLGSDRWAGLIGAHAAFPGE CHHHHHHHHHHHCCCCCCCCCCEECCCEEECCCCCCCCHHHHCCCHHHHHHHHHHCCCCC HLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRALGTHTAQLPTLTTDIASGLLAGA EEEEEECCCHHHHHHHHCCCCCCCCEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC QAEPFQIDTPRSLSAGCLYAQAGLIERAWRDLVAAWQAPVRLVLAGGAADDVARALTVAH CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH TRHDALILSGLALIAADAAPATAQD HHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA