| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is gntX [H]
Identifier: 116690870
GI number: 116690870
Start: 3150625
End: 3151422
Strand: Direct
Name: gntX [H]
Synonym: Bcen2424_2850
Alternate gene names: 116690870
Gene position: 3150625-3151422 (Clockwise)
Preceding gene: 116690861
Following gene: 116690871
Centisome position: 90.43
GC content: 73.56
Gene sequence:
>798_bases ATGGTCCGCGGTTCCGCCGAGCGCACGTTGCGCGTCGTTTTGTCGCAGGTTCGAACGCTGGCCGTGCGCGTCGCCGCCGC CACGTTGCCGAATCGCTGCGCGTTATGCGGCAATTTGTCACACGCCGTGATTTGCGGCGCCTGCGATGCCGCGTACTGGA ATGAAGCGCAGTTGCGCTGCGAGGTCTGCGCGCTGCCGCTCGGTGTCGGACACGCGCGATCGGCCGGCGGCGGTCGCCTC GGCGCCGGCCGCGCGGGCCTGTACCAGTGCGACGCGTGCCGCACCGCGCCGCCGCCGTTCGACGCGACGCTCGCGCTTGC CGATTACCGCGCGCCGCTCGACGGGCTCGCGCGCGGCCTGAAATTTCACGCACAGCTCGCGCTCGGTGGTGAATTCGCAG CCCGGCTTGCACGGCTGGTCGACGATACGCGCGGCGCGGGGGGCTTCGACCTCGTCGCGCCGGTACCGCTGTCGCACCGG CGGCTCGTCGCGCGCGGCTACAACCAGGCGTGGGCGATCGCGCGTCCGCTGGCGCGCCGGCTCGGCGTGCCAGCGGAGGC AGCCTTGCTCACGCGCGTCGCCGACACCGCGCCGCAGTCGCGGCTCGACCGGCACGCACGACGCGACAACGTGATGGCGG CTTTCGCGGTAGCGGGCGGCGTCGCCGGCCGCCACATCGCGCTCGTCGACGACGTGATGACGTCCGGCGCGACGCTCGCG GCGGCCGCGCGGGCGCTGAAGGCGGCGGGCGCCGCGCGCGTGACGAATCTGGTTGCGCTGCGCACCGCCAGGGATTAA
Upstream 100 bases:
>100_bases AAGTCGAAGCTGGGGACATGTCGGGCACACTGGCGAAGAGCCCGAAGTATACTCGCTCGCCTCGCAAGCTTCATTGAGGC GGCGTGCCAGGAGTGTTGCG
Downstream 100 bases:
>100_bases TTAGATAGAGAGGCCGCCCGCATGCGGCCGTCACGAACCGGCCAGCCGGATGCACGCGCGCGTTGCGCCGCTCCGGCCGC CCCAGCCAAACCGAAACATG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA AAARALKAAGAARVTNLVALRTARD
Sequences:
>Translated_265_residues MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA AAARALKAAGAARVTNLVALRTARD >Mature_265_residues MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA AAARALKAAGAARVTNLVALRTARD
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=241, Percent_Identity=33.6099585062241, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 27551; Mature: 27551
Theoretical pI: Translated: 11.06; Mature: 11.06
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRC CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHCCCHHEEE EVCALPLGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGL EEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH KFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHRRLVARGYNQAWAIARPLARR HHHHHEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHH LGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHH AAARALKAAGAARVTNLVALRTARD HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRC CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHCCCHHEEE EVCALPLGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGL EEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH KFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHRRLVARGYNQAWAIARPLARR HHHHHEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHH LGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHH AAARALKAAGAARVTNLVALRTARD HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]