Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is gntX [H]

Identifier: 116690870

GI number: 116690870

Start: 3150625

End: 3151422

Strand: Direct

Name: gntX [H]

Synonym: Bcen2424_2850

Alternate gene names: 116690870

Gene position: 3150625-3151422 (Clockwise)

Preceding gene: 116690861

Following gene: 116690871

Centisome position: 90.43

GC content: 73.56

Gene sequence:

>798_bases
ATGGTCCGCGGTTCCGCCGAGCGCACGTTGCGCGTCGTTTTGTCGCAGGTTCGAACGCTGGCCGTGCGCGTCGCCGCCGC
CACGTTGCCGAATCGCTGCGCGTTATGCGGCAATTTGTCACACGCCGTGATTTGCGGCGCCTGCGATGCCGCGTACTGGA
ATGAAGCGCAGTTGCGCTGCGAGGTCTGCGCGCTGCCGCTCGGTGTCGGACACGCGCGATCGGCCGGCGGCGGTCGCCTC
GGCGCCGGCCGCGCGGGCCTGTACCAGTGCGACGCGTGCCGCACCGCGCCGCCGCCGTTCGACGCGACGCTCGCGCTTGC
CGATTACCGCGCGCCGCTCGACGGGCTCGCGCGCGGCCTGAAATTTCACGCACAGCTCGCGCTCGGTGGTGAATTCGCAG
CCCGGCTTGCACGGCTGGTCGACGATACGCGCGGCGCGGGGGGCTTCGACCTCGTCGCGCCGGTACCGCTGTCGCACCGG
CGGCTCGTCGCGCGCGGCTACAACCAGGCGTGGGCGATCGCGCGTCCGCTGGCGCGCCGGCTCGGCGTGCCAGCGGAGGC
AGCCTTGCTCACGCGCGTCGCCGACACCGCGCCGCAGTCGCGGCTCGACCGGCACGCACGACGCGACAACGTGATGGCGG
CTTTCGCGGTAGCGGGCGGCGTCGCCGGCCGCCACATCGCGCTCGTCGACGACGTGATGACGTCCGGCGCGACGCTCGCG
GCGGCCGCGCGGGCGCTGAAGGCGGCGGGCGCCGCGCGCGTGACGAATCTGGTTGCGCTGCGCACCGCCAGGGATTAA

Upstream 100 bases:

>100_bases
AAGTCGAAGCTGGGGACATGTCGGGCACACTGGCGAAGAGCCCGAAGTATACTCGCTCGCCTCGCAAGCTTCATTGAGGC
GGCGTGCCAGGAGTGTTGCG

Downstream 100 bases:

>100_bases
TTAGATAGAGAGGCCGCCCGCATGCGGCCGTCACGAACCGGCCAGCCGGATGCACGCGCGCGTTGCGCCGCTCCGGCCGC
CCCAGCCAAACCGAAACATG

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL
GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR
RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA
AAARALKAAGAARVTNLVALRTARD

Sequences:

>Translated_265_residues
MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL
GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR
RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA
AAARALKAAGAARVTNLVALRTARD
>Mature_265_residues
MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRCEVCALPLGVGHARSAGGGRL
GAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGLKFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHR
RLVARGYNQAWAIARPLARRLGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA
AAARALKAAGAARVTNLVALRTARD

Specific function: Could be involved in gluconate metabolism [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=241, Percent_Identity=33.6099585062241, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 27551; Mature: 27551

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHCCCHHEEE
EVCALPLGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGL
EEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH
KFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHRRLVARGYNQAWAIARPLARR
HHHHHEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHH
LGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHH
AAARALKAAGAARVTNLVALRTARD
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVRGSAERTLRVVLSQVRTLAVRVAAATLPNRCALCGNLSHAVICGACDAAYWNEAQLRC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHCCCHHEEE
EVCALPLGVGHARSAGGGRLGAGRAGLYQCDACRTAPPPFDATLALADYRAPLDGLARGL
EEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEHHHHCCCHHHHHHHH
KFHAQLALGGEFAARLARLVDDTRGAGGFDLVAPVPLSHRRLVARGYNQAWAIARPLARR
HHHHHEEECHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCHHHHHHHHHHHH
LGVPAEAALLTRVADTAPQSRLDRHARRDNVMAAFAVAGGVAGRHIALVDDVMTSGATLA
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHH
AAARALKAAGAARVTNLVALRTARD
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]