| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116690779
Identifier: 116690779
GI number: 116690779
Start: 3054757
End: 3055041
Strand: Reverse
Name: 116690779
Synonym: Bcen2424_2759
Alternate gene names: NA
Gene position: 3055041-3054757 (Counterclockwise)
Preceding gene: 116690790
Following gene: 116690778
Centisome position: 87.69
GC content: 60.0
Gene sequence:
>285_bases ATGGGCCGCCTGCACGCACGCATGATGAACGCACTGGAACAAGAGCTCGCCACGCTGATCATCGGCGAACTGAATCTCGA AGACGTCCCGCTCGACACAGTGACGGCCGACACCCCGCTGTATGGCGAAGGGTTCGGGCTCGACTCCATCGACATCCTGG AAATCGCGCTGCTGATTTCGAAGAAATACGGCTTCGAACTGCGCTCGGACAATCCGGACAACCAGACAATCTTTGCGACG CTCGGTGCGCTGGCTGCCTACGTCGCCGCGCATCGCACGAAGTGA
Upstream 100 bases:
>100_bases CAACGACGCAGGCGGGGAAGCCGGCAGAGGCCGGAGGGACGGAGATTTGCACGCGCCGGGCGTGCACGACGGTTGCCGTT TCCGGGCGCCTCCCGCTGCC
Downstream 100 bases:
>100_bases CGGCGGCGCTCGGCGGACGATGCGCGGCGGCAGCGATCGAGGGGAACACGCGATGAACGGAGCAAGGCGATGCGGGCGCT CGTGACGGGCGGCAGCGGCG
Product: acyl carrier protein
Products: NA
Alternate protein names: Acyl-Carrier Protein-Like Protein
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MGRLHARMMNALEQELATLIIGELNLEDVPLDTVTADTPLYGEGFGLDSIDILEIALLISKKYGFELRSDNPDNQTIFAT LGALAAYVAAHRTK
Sequences:
>Translated_94_residues MGRLHARMMNALEQELATLIIGELNLEDVPLDTVTADTPLYGEGFGLDSIDILEIALLISKKYGFELRSDNPDNQTIFAT LGALAAYVAAHRTK >Mature_93_residues GRLHARMMNALEQELATLIIGELNLEDVPLDTVTADTPLYGEGFGLDSIDILEIALLISKKYGFELRSDNPDNQTIFATL GALAAYVAAHRTK
Specific function: Unknown
COG id: COG0236
COG function: function code IQ; Acyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10277; Mature: 10146
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLHARMMNALEQELATLIIGELNLEDVPLDTVTADTPLYGEGFGLDSIDILEIALLIS CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH KKYGFELRSDNPDNQTIFATLGALAAYVAAHRTK HHCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRLHARMMNALEQELATLIIGELNLEDVPLDTVTADTPLYGEGFGLDSIDILEIALLIS CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHH KKYGFELRSDNPDNQTIFATLGALAAYVAAHRTK HHCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA