| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690774
Identifier: 116690774
GI number: 116690774
Start: 3050475
End: 3050708
Strand: Reverse
Name: 116690774
Synonym: Bcen2424_2754
Alternate gene names: NA
Gene position: 3050708-3050475 (Counterclockwise)
Preceding gene: 116690775
Following gene: 116690773
Centisome position: 87.57
GC content: 61.54
Gene sequence:
>234_bases ATGAAGCAACCCACGCTCGCTCGGGCGTGGGTTTTTTGTTTTTTCGGCATGCACGTCGCCCCTTACCAGCTCGAAACCGC GCACGCGAAGGACGACGCGGCCGTCGAAGCCGCGACCCACGCGAAGCTGCACGAGGCGATCGCGTTGGCGTCGGACAACA CGATGTTCCTGCATCTACATACGAGCGTGATCGGCATGCTGCGCGAGCACATCTCCATCGACGTGACCGGATGA
Upstream 100 bases:
>100_bases CGTCGGCGAGCCGCGCGCAGCACATCCAGGATCGCATCGCGAAGGGCAGCTGATCCCGCGGCCGATCGCCGGCCGTCAGC GCCGGCGATCGGCAAGCGAC
Downstream 100 bases:
>100_bases CGATGGAGGACGAGCAGGCATCCGAGTTGCTGTCATTGCAGCACACGGGGCGTGTACGAGGCGATTTGCGCGCACCGGCC CGAAGAGGCGCGCACCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKQPTLARAWVFCFFGMHVAPYQLETAHAKDDAAVEAATHAKLHEAIALASDNTMFLHLHTSVIGMLREHISIDVTG
Sequences:
>Translated_77_residues MKQPTLARAWVFCFFGMHVAPYQLETAHAKDDAAVEAATHAKLHEAIALASDNTMFLHLHTSVIGMLREHISIDVTG >Mature_77_residues MKQPTLARAWVFCFFGMHVAPYQLETAHAKDDAAVEAATHAKLHEAIALASDNTMFLHLHTSVIGMLREHISIDVTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8486; Mature: 8486
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00196 COPPER_BLUE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQPTLARAWVFCFFGMHVAPYQLETAHAKDDAAVEAATHAKLHEAIALASDNTMFLHLH CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEH TSVIGMLREHISIDVTG HHHHHHHHHHEEEEECC >Mature Secondary Structure MKQPTLARAWVFCFFGMHVAPYQLETAHAKDDAAVEAATHAKLHEAIALASDNTMFLHLH CCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHEECCCCEEEEEEH TSVIGMLREHISIDVTG HHHHHHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA